Click here to switch to the map view.

The map label for this gene is 28211227

Identifier: 28211227

GI number: 28211227

Start: 1683949

End: 1684680

Strand: Direct

Name: 28211227

Synonym: CTC01559

Alternate gene names: NA

Gene position: 1683949-1684680 (Clockwise)

Preceding gene: 28211216

Following gene: 28211269

Centisome position: 60.16

GC content: 28.83

Gene sequence:

>732_bases
ATGTATTATTCTTGTGCCTTACATTTTTTAATTGCTAAAGCGATATGCTTAAATGCAGCATTATACTGTTTTAGCTCTAC
ATTTTTATCAAACTTTTCTAATAACTCTTGTAACTCTTCTGTATTCTTATACACAAAAGCCCACATCTCTTGTCCATTTC
TATTTATCTTTTCTATTCTATCTTCAAAAACCCCATGCGTATATAAATATGCTACTTTTCCCCTATTTACAATTTTAATT
TCTCTATCCATTTTTCTCTCCTCCAATTTTTCTAATAATTTTTTATTTAATTTACTACTATATTTATCTAATTCCTCTAG
TAATCTCTTTTCCCTTATTTCTAATTCTATATTATCCATTTTACATTCCTCCTGTTATACATTCTTCCATCTCTTTCCAT
TAGCAATATTGCTTATGTGCGTTTCGCTAACATTGTATTGTCTTGCCAATTCTTTTTGTGTAACACCTTTTTTAAGATAT
TTCTTAATTTCTATTACATCTTCTTTTCTTAATCTACAATTACCATTCTTTTCTCCCTTTTGTGCAGCCTTCATTTTTGT
TGTATCTCTTACTTTTGTTCCATGTTTTCCGCCAAATTTCTGCTTATTAATAAGATTCCAACCATTCACTCTCTGTACGT
GTTTTATCCACCAATCTTCTCTTTCGGTTAACATTTCCTCTGTACATTCTTCCAATATTGTATATTTAATTCTATTGCAA
TCTTTATTGTAA

Upstream 100 bases:

>100_bases
AATACAAAAGCATACATTATTACACTTCCTGTTATTATTTTATAAATATTACCTATTTTTAATAGGAATTCCATACTAAT
TCCTCCTTGCATATTTCTAT

Downstream 100 bases:

>100_bases
GCCTTTTGTAATTCTACATAATTATGTTCACCATTTTTTAAAAAAGCACTATGATTGCTCCATCTTTTAGCTATATCCGT
ACTTTGTCCTACATAAATAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MYYSCALHFLIAKAICLNAALYCFSSTFLSNFSNNSCNSSVFLYTKAHISCPFLFIFSILSSKTPCVYKYATFPLFTILI
SLSIFLSSNFSNNFLFNLLLYLSNSSSNLFSLISNSILSILHSSCYTFFHLFPLAILLMCVSLTLYCLANSFCVTPFLRY
FLISITSSFLNLQLPFFSPFCAAFIFVVSLTFVPCFPPNFCLLIRFQPFTLCTCFIHQSSLSVNISSVHSSNIVYLILLQ
SLL

Sequences:

>Translated_243_residues
MYYSCALHFLIAKAICLNAALYCFSSTFLSNFSNNSCNSSVFLYTKAHISCPFLFIFSILSSKTPCVYKYATFPLFTILI
SLSIFLSSNFSNNFLFNLLLYLSNSSSNLFSLISNSILSILHSSCYTFFHLFPLAILLMCVSLTLYCLANSFCVTPFLRY
FLISITSSFLNLQLPFFSPFCAAFIFVVSLTFVPCFPPNFCLLIRFQPFTLCTCFIHQSSLSVNISSVHSSNIVYLILLQ
SLL
>Mature_243_residues
MYYSCALHFLIAKAICLNAALYCFSSTFLSNFSNNSCNSSVFLYTKAHISCPFLFIFSILSSKTPCVYKYATFPLFTILI
SLSIFLSSNFSNNFLFNLLLYLSNSSSNLFSLISNSILSILHSSCYTFFHLFPLAILLMCVSLTLYCLANSFCVTPFLRY
FLISITSSFLNLQLPFFSPFCAAFIFVVSLTFVPCFPPNFCLLIRFQPFTLCTCFIHQSSLSVNISSVHSSNIVYLILLQ
SLL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27421; Mature: 27421

Theoretical pI: Translated: 8.28; Mature: 8.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.2 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
6.2 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYYSCALHFLIAKAICLNAALYCFSSTFLSNFSNNSCNSSVFLYTKAHISCPFLFIFSIL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCHHHHHHHHH
SSKTPCVYKYATFPLFTILISLSIFLSSNFSNNFLFNLLLYLSNSSSNLFSLISNSILSI
CCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHH
LHSSCYTFFHLFPLAILLMCVSLTLYCLANSFCVTPFLRYFLISITSSFLNLQLPFFSPF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEECCCCCHH
CAAFIFVVSLTFVPCFPPNFCLLIRFQPFTLCTCFIHQSSLSVNISSVHSSNIVYLILLQ
HHHHHHHHHHHHHCCCCCCEEEEEEECHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHH
SLL
HHC
>Mature Secondary Structure
MYYSCALHFLIAKAICLNAALYCFSSTFLSNFSNNSCNSSVFLYTKAHISCPFLFIFSIL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCHHHHHHHHH
SSKTPCVYKYATFPLFTILISLSIFLSSNFSNNFLFNLLLYLSNSSSNLFSLISNSILSI
CCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHH
LHSSCYTFFHLFPLAILLMCVSLTLYCLANSFCVTPFLRYFLISITSSFLNLQLPFFSPF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEECCCCCHH
CAAFIFVVSLTFVPCFPPNFCLLIRFQPFTLCTCFIHQSSLSVNISSVHSSNIVYLILLQ
HHHHHHHHHHHHHCCCCCCEEEEEEECHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHH
SLL
HHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA