| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is 28211132
Identifier: 28211132
GI number: 28211132
Start: 1572396
End: 1572800
Strand: Direct
Name: 28211132
Synonym: CTC01455
Alternate gene names: NA
Gene position: 1572396-1572800 (Clockwise)
Preceding gene: 28211127
Following gene: 28211133
Centisome position: 56.17
GC content: 20.99
Gene sequence:
>405_bases GTGGTGTTAATTATAATAAATTTTAATAGAACTGTATTATATAGAATAATTGCAAGTTTTATAGATGATTCTGCTTTATT ATTACTTTACATGTTCTTTACAAATATAATTAATAAAAATAATTCTAGTTTTGTTTATGTATTATTATTACTTGTATCCT TCATTTCTATTGAAATATGCTTTTTCATAAAAAGCACTTCTTTAGGTAAATTTATTATGGGTTTAAAGGTTATTGATAAG ACTTCTTCCTTAGAACTAGGATTTATAAAAATGCTTATAAGAGAAACATTTGGGAAGGTATTATCTAATATACTATTTAT AGGTAATATATATATATTATTTAATGATAGTAATCAAGGATTTCATGATAAACTAGTAAATTCTATAGTAATTGAAAATG ACTAG
Upstream 100 bases:
>100_bases GTGAGAAAAAGTTCAGAATATTTTCAGCAAGACCATAGAAGGTTTCGAAAGCCTCAAGTAGAACCTAAATATAAGTACAA ATTAAATTTTATTTACAAAG
Downstream 100 bases:
>100_bases CTTTTAATCTTAAGATATTACAATAATTTAACCTTTAATGAAATCGCAACTTCATTAAAGGTTAATTCAAATAAAGTGTA CGTGTGGCATATGAGAGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MVLIIINFNRTVLYRIIASFIDDSALLLLYMFFTNIINKNNSSFVYVLLLLVSFISIEICFFIKSTSLGKFIMGLKVIDK TSSLELGFIKMLIRETFGKVLSNILFIGNIYILFNDSNQGFHDKLVNSIVIEND
Sequences:
>Translated_134_residues MVLIIINFNRTVLYRIIASFIDDSALLLLYMFFTNIINKNNSSFVYVLLLLVSFISIEICFFIKSTSLGKFIMGLKVIDK TSSLELGFIKMLIRETFGKVLSNILFIGNIYILFNDSNQGFHDKLVNSIVIEND >Mature_134_residues MVLIIINFNRTVLYRIIASFIDDSALLLLYMFFTNIINKNNSSFVYVLLLLVSFISIEICFFIKSTSLGKFIMGLKVIDK TSSLELGFIKMLIRETFGKVLSNILFIGNIYILFNDSNQGFHDKLVNSIVIEND
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15349; Mature: 15349
Theoretical pI: Translated: 8.45; Mature: 8.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLIIINFNRTVLYRIIASFIDDSALLLLYMFFTNIINKNNSSFVYVLLLLVSFISIEIC CEEEEEECCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH FFIKSTSLGKFIMGLKVIDKTSSLELGFIKMLIRETFGKVLSNILFIGNIYILFNDSNQG EEEECCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCC FHDKLVNSIVIEND HHHHHHHHHEECCC >Mature Secondary Structure MVLIIINFNRTVLYRIIASFIDDSALLLLYMFFTNIINKNNSSFVYVLLLLVSFISIEIC CEEEEEECCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH FFIKSTSLGKFIMGLKVIDKTSSLELGFIKMLIRETFGKVLSNILFIGNIYILFNDSNQG EEEECCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCC FHDKLVNSIVIEND HHHHHHHHHEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA