Click here to switch to the map view.

The map label for this gene is ytaF [H]

Identifier: 28211028

GI number: 28211028

Start: 1448922

End: 1449554

Strand: Direct

Name: ytaF [H]

Synonym: CTC01345

Alternate gene names: 28211028

Gene position: 1448922-1449554 (Clockwise)

Preceding gene: 28211014

Following gene: 28211030

Centisome position: 51.76

GC content: 24.96

Gene sequence:

>633_bases
ATGACTATATTATATGTTAAGGGAGATTTTAATATGAGTATTTTATCTATATTAATATTTGCAATATCATCTACTTGTGA
TAGTTTCATAATCGGTATAAGTTATGGAATAAATAAAATAAGAATAAATTTTTTAAGCAACTTATTAGTTGCACTAATAA
GTGGACTCGGTACTTTTCTATCCATGTTACCAGGAGCTAAATTAATTAATTATATATCTCCTAAGCAAGCTAATAAATTC
GGAAGCTTGCTTCTTATTATGGTAGGTATATGTTTAATAATAAATAGTTTACGTAAAAAAAATAAATTTAATGATGAAAG
CTCTTATTCGGACCTTTTAAAAAATCCTGAAAAAATGGACTTTGATTCTTCGAAAAACATAGAGCTTAAAGAGGCTATAT
ATCTTGGTATATTCCTTTGTTTAAATAATATAGGCCTTGGTATAATGGCAAGTATCATAGGATTAAATATTTACGTCACC
TCATTTTTATCTTTTTTATTTAGTTTAATTTTTTTAAAGTTAGGATGTTTTATAGGAAAAAAAGCTTCTGCTCATAGTTT
TAATGATAAATTTGCAGAAATTTCCTCTTATATATTAATAATTTTACTTGGGATATGGGAACTTTTTAGTTAA

Upstream 100 bases:

>100_bases
TTCACTACTATTCCTATATGTTTAGTATGATTATATTCTATTTGAGTTTTTTTGTCAATAATTTATATCAAAATTCTATA
TACATACATACCATGAAATT

Downstream 100 bases:

>100_bases
TGAAGAATGAACAATGAATAATTGTGGATAGCTTTTCTCCACTTCGTTACGAAAAACTTTTAATTTTATAAATATAGTAA
TGTTCAGCTTGCTGAACGAG

Product: membrane spanning protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 209

Protein sequence:

>210_residues
MTILYVKGDFNMSILSILIFAISSTCDSFIIGISYGINKIRINFLSNLLVALISGLGTFLSMLPGAKLINYISPKQANKF
GSLLLIMVGICLIINSLRKKNKFNDESSYSDLLKNPEKMDFDSSKNIELKEAIYLGIFLCLNNIGLGIMASIIGLNIYVT
SFLSFLFSLIFLKLGCFIGKKASAHSFNDKFAEISSYILIILLGIWELFS

Sequences:

>Translated_210_residues
MTILYVKGDFNMSILSILIFAISSTCDSFIIGISYGINKIRINFLSNLLVALISGLGTFLSMLPGAKLINYISPKQANKF
GSLLLIMVGICLIINSLRKKNKFNDESSYSDLLKNPEKMDFDSSKNIELKEAIYLGIFLCLNNIGLGIMASIIGLNIYVT
SFLSFLFSLIFLKLGCFIGKKASAHSFNDKFAEISSYILIILLGIWELFS
>Mature_209_residues
TILYVKGDFNMSILSILIFAISSTCDSFIIGISYGINKIRINFLSNLLVALISGLGTFLSMLPGAKLINYISPKQANKFG
SLLLIMVGICLIINSLRKKNKFNDESSYSDLLKNPEKMDFDSSKNIELKEAIYLGIFLCLNNIGLGIMASIIGLNIYVTS
FLSFLFSLIFLKLGCFIGKKASAHSFNDKFAEISSYILIILLGIWELFS

Specific function: Unknown

COG id: COG1971

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003810
- InterPro:   IPR014205 [H]

Pfam domain/function: PF02659 DUF204 [H]

EC number: NA

Molecular weight: Translated: 23289; Mature: 23158

Theoretical pI: Translated: 9.12; Mature: 9.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTILYVKGDFNMSILSILIFAISSTCDSFIIGISYGINKIRINFLSNLLVALISGLGTFL
CEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
SMLPGAKLINYISPKQANKFGSLLLIMVGICLIINSLRKKNKFNDESSYSDLLKNPEKMD
HHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCC
FDSSKNIELKEAIYLGIFLCLNNIGLGIMASIIGLNIYVTSFLSFLFSLIFLKLGCFIGK
CCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KASAHSFNDKFAEISSYILIILLGIWELFS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
TILYVKGDFNMSILSILIFAISSTCDSFIIGISYGINKIRINFLSNLLVALISGLGTFL
EEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
SMLPGAKLINYISPKQANKFGSLLLIMVGICLIINSLRKKNKFNDESSYSDLLKNPEKMD
HHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCC
FDSSKNIELKEAIYLGIFLCLNNIGLGIMASIIGLNIYVTSFLSFLFSLIFLKLGCFIGK
CCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KASAHSFNDKFAEISSYILIILLGIWELFS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]