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The map label for this gene is ftsY [H]

Identifier: 28210933

GI number: 28210933

Start: 1337149

End: 1338060

Strand: Direct

Name: ftsY [H]

Synonym: CTC01246

Alternate gene names: 28210933

Gene position: 1337149-1338060 (Clockwise)

Preceding gene: 28210932

Following gene: 28210934

Centisome position: 47.77

GC content: 30.37

Gene sequence:

>912_bases
ATGTTCGGAGGTTTTTTTGGAAAATTAAAAGAAGGATTAACGAAAACAAAGGATAATTTTACAGGTAAAATAAGTTCAAT
GCTTAATTTATATGTAAATATAGACGAGGATCTATTTGAGGAATTAGAAGAAATTCTTATTACATCAGATATAGGTGTGG
AAACATCCTTAGATATAATAGATAATTTAAGAGAAAAAATAAAGGAAAAAAAAATAAAAGATCCAAAAGAAGTTATACCT
TGTTTAAAAGAGGTTATTATTGACATGCTAGGAGATGAAGAGAATTCTATAATTCCAGAAAAAACACCAGAAATAATTTT
AGTAATTGGTGTAAATGGAGTAGGAAAGACAACTTCTATAGGAAAAATGTCTCATAAATTAAAAAATAATGGATTTAAAG
TTTTAATGGCTGCTGGAGATACCTTTAGAGCTGCTGCTATAGAACAGTTAGAAGTATGGAGTCAAAGAGCAGGTGTTGAT
ATAATAAGGCAACAAGAGGGTTCAGATCCTGCAGCAGTTGTATTTGACAGTATACAGGCGGCTAAAGCAAGAAAAACAGA
TGTATTGATATGTGATACAGCAGGTAGACTTCATAATAAGAAAAATTTAATGGATGAACTTTCAAAAATAAATAGAATAG
TTGAAAGAGAATACAGTGAAGCAAATAAAAAAACATATTTAGTTTTAGATGCCACCACAGGACAAAACGCACTTCAACAA
GCAAAGCAGTTTACCCAGGTTTGTAATGTAGATGGAATAATATTGACCAAATTAGATGGTACTGCTAAGGGAGGAATAGT
AATATCCATAAAGCATCAACTAAATATTCCTGTGAAATTAATAGGAGTTGGAGAAGGAATAGATGATCTTCAAAATTTCA
ATTCAAGAGAATTTGTAGAAGCCTTATTCTAA

Upstream 100 bases:

>100_bases
AGTAATGCTTTATATGGTATAACTATGGAAGAAAAAGGTGTATCAAAAGTTGTTTCTGTAGATTTAAAAAATTAGCGTAG
TAAATAAGGAGGCAGTTTTA

Downstream 100 bases:

>100_bases
TGAACAATTTAGGAGGATTTTCTTCCGTTTTACTCCAGAAAATCTTAATTTTGATTGAAGGCTCGTTTAGCTTCGCTAAA
CATTAAGGTTTTATAAAATT

Product: signal recognition particle receptor ftsY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MFGGFFGKLKEGLTKTKDNFTGKISSMLNLYVNIDEDLFEELEEILITSDIGVETSLDIIDNLREKIKEKKIKDPKEVIP
CLKEVIIDMLGDEENSIIPEKTPEIILVIGVNGVGKTTSIGKMSHKLKNNGFKVLMAAGDTFRAAAIEQLEVWSQRAGVD
IIRQQEGSDPAAVVFDSIQAAKARKTDVLICDTAGRLHNKKNLMDELSKINRIVEREYSEANKKTYLVLDATTGQNALQQ
AKQFTQVCNVDGIILTKLDGTAKGGIVISIKHQLNIPVKLIGVGEGIDDLQNFNSREFVEALF

Sequences:

>Translated_303_residues
MFGGFFGKLKEGLTKTKDNFTGKISSMLNLYVNIDEDLFEELEEILITSDIGVETSLDIIDNLREKIKEKKIKDPKEVIP
CLKEVIIDMLGDEENSIIPEKTPEIILVIGVNGVGKTTSIGKMSHKLKNNGFKVLMAAGDTFRAAAIEQLEVWSQRAGVD
IIRQQEGSDPAAVVFDSIQAAKARKTDVLICDTAGRLHNKKNLMDELSKINRIVEREYSEANKKTYLVLDATTGQNALQQ
AKQFTQVCNVDGIILTKLDGTAKGGIVISIKHQLNIPVKLIGVGEGIDDLQNFNSREFVEALF
>Mature_303_residues
MFGGFFGKLKEGLTKTKDNFTGKISSMLNLYVNIDEDLFEELEEILITSDIGVETSLDIIDNLREKIKEKKIKDPKEVIP
CLKEVIIDMLGDEENSIIPEKTPEIILVIGVNGVGKTTSIGKMSHKLKNNGFKVLMAAGDTFRAAAIEQLEVWSQRAGVD
IIRQQEGSDPAAVVFDSIQAAKARKTDVLICDTAGRLHNKKNLMDELSKINRIVEREYSEANKKTYLVLDATTGQNALQQ
AKQFTQVCNVDGIILTKLDGTAKGGIVISIKHQLNIPVKLIGVGEGIDDLQNFNSREFVEALF

Specific function: Required for normal cell growth and morphogenesis; translocation of at least 1 protein is impaired in its absence [H]

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI4507215, Length=293, Percent_Identity=25.938566552901, Blast_Score=117, Evalue=2e-26,
Organism=Homo sapiens, GI295424842, Length=339, Percent_Identity=27.4336283185841, Blast_Score=116, Evalue=2e-26,
Organism=Homo sapiens, GI23308697, Length=339, Percent_Identity=27.4336283185841, Blast_Score=116, Evalue=3e-26,
Organism=Homo sapiens, GI226371618, Length=199, Percent_Identity=30.6532663316583, Blast_Score=114, Evalue=1e-25,
Organism=Homo sapiens, GI89061728, Length=135, Percent_Identity=31.1111111111111, Blast_Score=78, Evalue=1e-14,
Organism=Escherichia coli, GI1789874, Length=303, Percent_Identity=50.4950495049505, Blast_Score=280, Evalue=1e-76,
Organism=Escherichia coli, GI1788963, Length=298, Percent_Identity=31.5436241610738, Blast_Score=158, Evalue=3e-40,
Organism=Caenorhabditis elegans, GI17539958, Length=271, Percent_Identity=27.3062730627306, Blast_Score=117, Evalue=6e-27,
Organism=Caenorhabditis elegans, GI193206261, Length=296, Percent_Identity=30.0675675675676, Blast_Score=115, Evalue=2e-26,
Organism=Saccharomyces cerevisiae, GI6325345, Length=304, Percent_Identity=31.9078947368421, Blast_Score=151, Evalue=1e-37,
Organism=Saccharomyces cerevisiae, GI6320498, Length=231, Percent_Identity=29.8701298701299, Blast_Score=96, Evalue=8e-21,
Organism=Drosophila melanogaster, GI17647949, Length=199, Percent_Identity=31.1557788944724, Blast_Score=113, Evalue=1e-25,
Organism=Drosophila melanogaster, GI24641198, Length=321, Percent_Identity=29.2834890965732, Blast_Score=105, Evalue=3e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N [H]

EC number: NA

Molecular weight: Translated: 33495; Mature: 33495

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGGFFGKLKEGLTKTKDNFTGKISSMLNLYVNIDEDLFEELEEILITSDIGVETSLDII
CCCCHHHHHHHHHHHCCCCHHHHHHHHHHEEEECCHHHHHHHHHHHHHCCCCCCCHHHHH
DNLREKIKEKKIKDPKEVIPCLKEVIIDMLGDEENSIIPEKTPEIILVIGVNGVGKTTSI
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCHH
GKMSHKLKNNGFKVLMAAGDTFRAAAIEQLEVWSQRAGVDIIRQQEGSDPAAVVFDSIQA
HHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHH
AKARKTDVLICDTAGRLHNKKNLMDELSKINRIVEREYSEANKKTYLVLDATTGQNALQQ
HHCCCCCEEEECCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHH
AKQFTQVCNVDGIILTKLDGTAKGGIVISIKHQLNIPVKLIGVGEGIDDLQNFNSREFVE
HHHHHHHHCCCCEEEEEECCCCCCCEEEEEEECCCCCEEEEECCCCHHHHHCCCHHHHHH
ALF
HHC
>Mature Secondary Structure
MFGGFFGKLKEGLTKTKDNFTGKISSMLNLYVNIDEDLFEELEEILITSDIGVETSLDII
CCCCHHHHHHHHHHHCCCCHHHHHHHHHHEEEECCHHHHHHHHHHHHHCCCCCCCHHHHH
DNLREKIKEKKIKDPKEVIPCLKEVIIDMLGDEENSIIPEKTPEIILVIGVNGVGKTTSI
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCHH
GKMSHKLKNNGFKVLMAAGDTFRAAAIEQLEVWSQRAGVDIIRQQEGSDPAAVVFDSIQA
HHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHH
AKARKTDVLICDTAGRLHNKKNLMDELSKINRIVEREYSEANKKTYLVLDATTGQNALQQ
HHCCCCCEEEECCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHH
AKQFTQVCNVDGIILTKLDGTAKGGIVISIKHQLNIPVKLIGVGEGIDDLQNFNSREFVE
HHHHHHHHCCCCEEEEEECCCCCCCEEEEEEECCCCCEEEEECCCCHHHHHCCCHHHHHH
ALF
HHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7584053; 9384377; 8654983 [H]