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The map label for this gene is yfbR [C]

Identifier: 28210891

GI number: 28210891

Start: 1287399

End: 1287980

Strand: Direct

Name: yfbR [C]

Synonym: CTC01203

Alternate gene names: 28210891

Gene position: 1287399-1287980 (Clockwise)

Preceding gene: 28210890

Following gene: 28210892

Centisome position: 45.99

GC content: 30.24

Gene sequence:

>582_bases
GTGAATAAGGGGTGGATTAAAATGAATACAAAACAATTAATTGAATTTATGTCTATTGCAGAAAAATTAAAAAACAATAC
ACGTCATTCATGGACTTCTAGTGGACGTAAAGAAAGTGTAGCAGAGCATAGTTGGAGGCTATCTTTAATGGCATATTTAG
TAAAGGATGAGTATCCAAATGCGGATATAAATAAAGTTATTTTAATGTGTATATGTCATGATTTAGGAGAAGCTATTACA
GGGGATATACCTGCTTTTTATAAGACTGAATCTGATGAAATAGTTGAAAGTAATGCAGTATATAAGTTACTTGATAGTTT
GCCACAACCATATAAGAAGGAATTAACTAATTTGTTTAAAGAAATGGATGAGCAACAAACGCTGGAAGCTAAACTATATA
AAGCATTGGATAAGATGGAGACATTAATTCAACATAATGAGGCAGACTTATCAACATGGATACCTATTGAATATGAGATG
AACTTGTCTTATGGAACAAAAGAAGTTGAATTCTCCGATTATGCAAAAAAATTAAAGCAAACAATTTATGAAGATTCGGT
GCAAAAAATAAAAACTAAATAA

Upstream 100 bases:

>100_bases
AGCAGGAAAGTATTGTCCAAACCCTAGATACTCTAGAGATTTAATAAATAATTTTTTAAATGATTTATTAAAGTTTAAAT
AAAAAAATACAGAGTGTGAA

Downstream 100 bases:

>100_bases
TTATAAAATATATCCTATAGAATGAACAATTTAAAAAAATCTATTCTATAGGGTTTTATCTTTTAATAGAATGTCTTTTG
AAATTTAAATAATGGGATAT

Product: HAD superfamily hydrolase

Products: NA

Alternate protein names: Metal-Dependent Phosphohydrolase; HD Domain Protein; HD Domain-Containing Protein; Metal-Dependent Phosphohydrolase HD Subdomain; HD Superfamily Hydrolase; HD Domain-Containing; Hydrolase; HAD Superfamily Hydrolase; HDDC2 Protein; Oxetanocin-Like Protein; Metal-Dependent Phosphoesterase; Xin-Antitoxin System Toxin Component PIN Family

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MNKGWIKMNTKQLIEFMSIAEKLKNNTRHSWTSSGRKESVAEHSWRLSLMAYLVKDEYPNADINKVILMCICHDLGEAIT
GDIPAFYKTESDEIVESNAVYKLLDSLPQPYKKELTNLFKEMDEQQTLEAKLYKALDKMETLIQHNEADLSTWIPIEYEM
NLSYGTKEVEFSDYAKKLKQTIYEDSVQKIKTK

Sequences:

>Translated_193_residues
MNKGWIKMNTKQLIEFMSIAEKLKNNTRHSWTSSGRKESVAEHSWRLSLMAYLVKDEYPNADINKVILMCICHDLGEAIT
GDIPAFYKTESDEIVESNAVYKLLDSLPQPYKKELTNLFKEMDEQQTLEAKLYKALDKMETLIQHNEADLSTWIPIEYEM
NLSYGTKEVEFSDYAKKLKQTIYEDSVQKIKTK
>Mature_193_residues
MNKGWIKMNTKQLIEFMSIAEKLKNNTRHSWTSSGRKESVAEHSWRLSLMAYLVKDEYPNADINKVILMCICHDLGEAIT
GDIPAFYKTESDEIVESNAVYKLLDSLPQPYKKELTNLFKEMDEQQTLEAKLYKALDKMETLIQHNEADLSTWIPIEYEM
NLSYGTKEVEFSDYAKKLKQTIYEDSVQKIKTK

Specific function: Unknown

COG id: COG1896

COG function: function code R; Predicted hydrolases of HD superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI116875826, Length=143, Percent_Identity=32.8671328671329, Blast_Score=67, Evalue=7e-12,
Organism=Drosophila melanogaster, GI24582262, Length=186, Percent_Identity=27.4193548387097, Blast_Score=64, Evalue=6e-11,
Organism=Drosophila melanogaster, GI24582260, Length=186, Percent_Identity=27.4193548387097, Blast_Score=64, Evalue=6e-11,
Organism=Drosophila melanogaster, GI20129283, Length=186, Percent_Identity=27.4193548387097, Blast_Score=64, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22504; Mature: 22504

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKGWIKMNTKQLIEFMSIAEKLKNNTRHSWTSSGRKESVAEHSWRLSLMAYLVKDEYPN
CCCCCEEECHHHHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHCCCCC
ADINKVILMCICHDLGEAITGDIPAFYKTESDEIVESNAVYKLLDSLPQPYKKELTNLFK
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
EMDEQQTLEAKLYKALDKMETLIQHNEADLSTWIPIEYEMNLSYGTKEVEFSDYAKKLKQ
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCEEEEECCCCCCCCCCHHHHHHHHHH
TIYEDSVQKIKTK
HHHHHHHHHHCCC
>Mature Secondary Structure
MNKGWIKMNTKQLIEFMSIAEKLKNNTRHSWTSSGRKESVAEHSWRLSLMAYLVKDEYPN
CCCCCEEECHHHHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHCCCCC
ADINKVILMCICHDLGEAITGDIPAFYKTESDEIVESNAVYKLLDSLPQPYKKELTNLFK
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
EMDEQQTLEAKLYKALDKMETLIQHNEADLSTWIPIEYEMNLSYGTKEVEFSDYAKKLKQ
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCEEEEECCCCCCCCCCHHHHHHHHHH
TIYEDSVQKIKTK
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA