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The map label for this gene is yhcS [H]

Identifier: 28210887

GI number: 28210887

Start: 1281257

End: 1281856

Strand: Direct

Name: yhcS [H]

Synonym: CTC01198

Alternate gene names: 28210887

Gene position: 1281257-1281856 (Clockwise)

Preceding gene: 28210886

Following gene: 28210888

Centisome position: 45.77

GC content: 25.83

Gene sequence:

>600_bases
ATGAAAAAAATTATAGCAACTTTGCTTATTCTAATAGGAATTATAGTAACTTTAACATCTTTTGGTTTAAAAATGTATTC
TAAGAGTAAAGAAAAAGCTTTAATGAATCATTTAACTAATGAGTTAAAGTTAGAGAATAAAAAGGAAACACCTAAAAAAA
CGGATGTTAAAGATAATAATGAAAATGAAATAATTAATTTACATGGAGCTATGGCAATAATAGAAATCCCTTCTATAGGT
TTAAAATCTGTAATTGTGGAGGGGACAGAAATGGAAAAGCTAAGATATTATATAGGGCACTTTAAAGAGACAGCTTTACC
AGGTCAATTGGGAAACTTTTGTATAGCAGGACATAGTAGTAGTATGTATAGCGAAATTTTAAATAATCTTCACAAAGTAA
AAATTGGAGATGAAATTAAAATAAAAACAATAAAAGAAGAATTTAACTATAATATAAAAGAAAAATTTGTTGTTGATCCT
ACTAAAGTAAGCGTGCTAAATCAAGATAAAACAAAAAGGAGTATGACTATAGTGACTTGTACTGACAATGGAAAAAACAG
ATTAATAGTTAAAGGAGAAATAAATAAAAATGATAAATAG

Upstream 100 bases:

>100_bases
AAAAAATCAGTTTGGAGAAAAACTTATTTTCATTCCTAAAAAAATTTGTAATTGTAATAAAGATATATCATAAGTTCTTT
TAGGTTGAAAGGAGTAGTAT

Downstream 100 bases:

>100_bases
GAGACTAATAAATTTAGTTGGAGATTCAAAAGTATGGATTTTTCTAACAGTGTTAATGAAGTGGATTAGTTTATTGTTTA
ATATAATAAATATAATGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MKKIIATLLILIGIIVTLTSFGLKMYSKSKEKALMNHLTNELKLENKKETPKKTDVKDNNENEIINLHGAMAIIEIPSIG
LKSVIVEGTEMEKLRYYIGHFKETALPGQLGNFCIAGHSSSMYSEILNNLHKVKIGDEIKIKTIKEEFNYNIKEKFVVDP
TKVSVLNQDKTKRSMTIVTCTDNGKNRLIVKGEINKNDK

Sequences:

>Translated_199_residues
MKKIIATLLILIGIIVTLTSFGLKMYSKSKEKALMNHLTNELKLENKKETPKKTDVKDNNENEIINLHGAMAIIEIPSIG
LKSVIVEGTEMEKLRYYIGHFKETALPGQLGNFCIAGHSSSMYSEILNNLHKVKIGDEIKIKTIKEEFNYNIKEKFVVDP
TKVSVLNQDKTKRSMTIVTCTDNGKNRLIVKGEINKNDK
>Mature_199_residues
MKKIIATLLILIGIIVTLTSFGLKMYSKSKEKALMNHLTNELKLENKKETPKKTDVKDNNENEIINLHGAMAIIEIPSIG
LKSVIVEGTEMEKLRYYIGHFKETALPGQLGNFCIAGHSSSMYSEILNNLHKVKIGDEIKIKTIKEEFNYNIKEKFVVDP
TKVSVLNQDKTKRSMTIVTCTDNGKNRLIVKGEINKNDK

Specific function: Unknown

COG id: COG3764

COG function: function code M; Sortase (surface protein transpeptidase)

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005754 [H]

Pfam domain/function: PF04203 Sortase [H]

EC number: NA

Molecular weight: Translated: 22479; Mature: 22479

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIIATLLILIGIIVTLTSFGLKMYSKSKEKALMNHLTNELKLENKKETPKKTDVKDNN
CHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
ENEIINLHGAMAIIEIPSIGLKSVIVEGTEMEKLRYYIGHFKETALPGQLGNFCIAGHSS
CCCEEEECCCEEEEEECCCCHHHHEECCCHHHHHHHHHHHHHHCCCCCCCCCEEEECCCH
SMYSEILNNLHKVKIGDEIKIKTIKEEFNYNIKEKFVVDPTKVSVLNQDKTKRSMTIVTC
HHHHHHHHHHHEEECCCEEEEEEEHHHHCCCCCCEEEECCCEEEEECCCCCCCEEEEEEE
TDNGKNRLIVKGEINKNDK
ECCCCEEEEEEECCCCCCC
>Mature Secondary Structure
MKKIIATLLILIGIIVTLTSFGLKMYSKSKEKALMNHLTNELKLENKKETPKKTDVKDNN
CHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
ENEIINLHGAMAIIEIPSIGLKSVIVEGTEMEKLRYYIGHFKETALPGQLGNFCIAGHSS
CCCEEEECCCEEEEEECCCCHHHHEECCCHHHHHHHHHHHHHHCCCCCCCCCEEEECCCH
SMYSEILNNLHKVKIGDEIKIKTIKEEFNYNIKEKFVVDPTKVSVLNQDKTKRSMTIVTC
HHHHHHHHHHHEEECCCEEEEEEEHHHHCCCCCCEEEECCCEEEEECCCCCCCEEEEEEE
TDNGKNRLIVKGEINKNDK
ECCCCEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969498; 9384377 [H]