Click here to switch to the map view.

The map label for this gene is 28210810

Identifier: 28210810

GI number: 28210810

Start: 1177611

End: 1178489

Strand: Direct

Name: 28210810

Synonym: CTC01111

Alternate gene names: NA

Gene position: 1177611-1178489 (Clockwise)

Preceding gene: 28210809

Following gene: 28210811

Centisome position: 42.07

GC content: 28.1

Gene sequence:

>879_bases
TTGAATAAAAAAAAATACTCTTTGAATTTTAAAAGTGATGGTTATATTTTTTTCGATAACTTTCCAAAGTTTGGAGATAA
CTACACCTTGCAAATTTGGATTAATAGCAATTCGAATTCTTTTAACGCTTGGTCAGGGTTATTTATGCGTGGTGACTTAA
ATACTTCTCAAGGATTATATTGGTACGGTAAAGACTTGTGTTTTACTAATGCTGTAAGTGGAAGAGTAGTAATAGATACT
GTAGACAATTTTCCAATAGGAAGTTGGCACAATATAACAATTGCCCATGAGAAACAATTCATAAAATATTATAGAGATGG
AAACTTTATTAGAAAATTTCAAGTTGGTAAATCTATTAATAGTTTAGATGATTTGTATATAGGTGTTTGGGACAATTATT
CAAGATATAATGGAAAAGTATCCGAAGCTAGAGTATGGAGTAAAGCACTAAATGACCAAGAAGTATTATTTACTTATAAT
AAAGAACTAACAGGAAACAATAGACATTTAGTTGCTCATTGGGGAATAAACGAGGGTAATCTTACGGAGATATATGATTA
TTCTAATAATGGATATAACGGAAGGGTTTACGGTGGAGAATGGGTTGAAGATTCTCCAAGTATTTATTGTTATAAATATC
TGATTAAACAAGATTCAAATTATTACTCAATTAAACCTGAATATATCCAAGAAGAAGTGTTTAAGTCTTTAATTTTAGAT
GGTGGTAAAAAACCTAATAGAGATGATTTTAATAAATATGGATTTAATAATTTAAATGATTTATTAATAGAATATAATTT
AGAAAAGCTGTTTAAACCTGCAGATATATTAAAGAAGATCAATAGTGGCAAGTTTCATATAGTTATGATGGAGATGTAA

Upstream 100 bases:

>100_bases
AAAATTTATGATAAATTAGATAATGAATTTGAAATAATGATGGATGTGTAAAGAAAAACTTGATTAATAAACAAATTTTA
TTACGAAAGGATGATATAGT

Downstream 100 bases:

>100_bases
TAAATTAATCAATAAAAGTAGATTTAAAAAGAATACTAGACTAGAAAGAGTCTTTTTTCAATGCAAAAATAGGAGCAATG
CTACGTTGCCATTGCTCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MNKKKYSLNFKSDGYIFFDNFPKFGDNYTLQIWINSNSNSFNAWSGLFMRGDLNTSQGLYWYGKDLCFTNAVSGRVVIDT
VDNFPIGSWHNITIAHEKQFIKYYRDGNFIRKFQVGKSINSLDDLYIGVWDNYSRYNGKVSEARVWSKALNDQEVLFTYN
KELTGNNRHLVAHWGINEGNLTEIYDYSNNGYNGRVYGGEWVEDSPSIYCYKYLIKQDSNYYSIKPEYIQEEVFKSLILD
GGKKPNRDDFNKYGFNNLNDLLIEYNLEKLFKPADILKKINSGKFHIVMMEM

Sequences:

>Translated_292_residues
MNKKKYSLNFKSDGYIFFDNFPKFGDNYTLQIWINSNSNSFNAWSGLFMRGDLNTSQGLYWYGKDLCFTNAVSGRVVIDT
VDNFPIGSWHNITIAHEKQFIKYYRDGNFIRKFQVGKSINSLDDLYIGVWDNYSRYNGKVSEARVWSKALNDQEVLFTYN
KELTGNNRHLVAHWGINEGNLTEIYDYSNNGYNGRVYGGEWVEDSPSIYCYKYLIKQDSNYYSIKPEYIQEEVFKSLILD
GGKKPNRDDFNKYGFNNLNDLLIEYNLEKLFKPADILKKINSGKFHIVMMEM
>Mature_292_residues
MNKKKYSLNFKSDGYIFFDNFPKFGDNYTLQIWINSNSNSFNAWSGLFMRGDLNTSQGLYWYGKDLCFTNAVSGRVVIDT
VDNFPIGSWHNITIAHEKQFIKYYRDGNFIRKFQVGKSINSLDDLYIGVWDNYSRYNGKVSEARVWSKALNDQEVLFTYN
KELTGNNRHLVAHWGINEGNLTEIYDYSNNGYNGRVYGGEWVEDSPSIYCYKYLIKQDSNYYSIKPEYIQEEVFKSLILD
GGKKPNRDDFNKYGFNNLNDLLIEYNLEKLFKPADILKKINSGKFHIVMMEM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34237; Mature: 34237

Theoretical pI: Translated: 7.58; Mature: 7.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKKKYSLNFKSDGYIFFDNFPKFGDNYTLQIWINSNSNSFNAWSGLFMRGDLNTSQGLY
CCCCEEEEEECCCCEEEECCCCCCCCCEEEEEEEECCCCCCCCEEEEEEECCCCCCCCEE
WYGKDLCFTNAVSGRVVIDTVDNFPIGSWHNITIAHEKQFIKYYRDGNFIRKFQVGKSIN
EEECCEEEECCCCCEEEEEECCCCCCCCEEEEEEECHHHHHHHHCCCCEEEEEECCCCCC
SLDDLYIGVWDNYSRYNGKVSEARVWSKALNDQEVLFTYNKELTGNNRHLVAHWGINEGN
CCCCEEEEEECCCHHCCCCHHHHHHHHHHCCCCEEEEEECCEECCCCCEEEEEECCCCCC
LTEIYDYSNNGYNGRVYGGEWVEDSPSIYCYKYLIKQDSNYYSIKPEYIQEEVFKSLILD
EEEEEECCCCCCCEEEECCCCCCCCCCEEEEEEEEECCCCEEEECHHHHHHHHHHHHHHC
GGKKPNRDDFNKYGFNNLNDLLIEYNLEKLFKPADILKKINSGKFHIVMMEM
CCCCCCCCCHHHCCCCCCCCEEEEECHHHHCCHHHHHHHCCCCCEEEEEEEC
>Mature Secondary Structure
MNKKKYSLNFKSDGYIFFDNFPKFGDNYTLQIWINSNSNSFNAWSGLFMRGDLNTSQGLY
CCCCEEEEEECCCCEEEECCCCCCCCCEEEEEEEECCCCCCCCEEEEEEECCCCCCCCEE
WYGKDLCFTNAVSGRVVIDTVDNFPIGSWHNITIAHEKQFIKYYRDGNFIRKFQVGKSIN
EEECCEEEECCCCCEEEEEECCCCCCCCEEEEEEECHHHHHHHHCCCCEEEEEECCCCCC
SLDDLYIGVWDNYSRYNGKVSEARVWSKALNDQEVLFTYNKELTGNNRHLVAHWGINEGN
CCCCEEEEEECCCHHCCCCHHHHHHHHHHCCCCEEEEEECCEECCCCCEEEEEECCCCCC
LTEIYDYSNNGYNGRVYGGEWVEDSPSIYCYKYLIKQDSNYYSIKPEYIQEEVFKSLILD
EEEEEECCCCCCCEEEECCCCCCCCCCEEEEEEEEECCCCEEEECHHHHHHHHHHHHHHC
GGKKPNRDDFNKYGFNNLNDLLIEYNLEKLFKPADILKKINSGKFHIVMMEM
CCCCCCCCCHHHCCCCCCCCEEEEECHHHHCCHHHHHHHCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA