| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is 28210806
Identifier: 28210806
GI number: 28210806
Start: 1172442
End: 1174334
Strand: Direct
Name: 28210806
Synonym: CTC01106
Alternate gene names: NA
Gene position: 1172442-1174334 (Clockwise)
Preceding gene: 28210805
Following gene: 28210807
Centisome position: 41.88
GC content: 24.25
Gene sequence:
>1893_bases ATGCCCCTACATAAAATACCCCTATGTAGTCTTAAATATGTAGGGGATACTCATTCTGGTGCAACTTTTAAATATGATAT TACAAGCAAAGTGTTAAAACATAAAGAAAAACTATTTTATAAGGATAAGATAGTTGAAATAGATAAGACTAGAGGAGATA AACTCTTATATAAGTATTTTTATAATATAGAAAAGAAGAATAATGAATATTTATATAAAGAAAATCCCATTATGGTAAAA GAATTTGAAAAAGAGCTAAAGTTGCATGACAGAGAAATAAATAAAGATAAAAGTATGCCTTTAGAAGATACAAACATTAT AGAATTTAATAAAAAGAAAAGTATGCAACTAGGGCAAAAGGAATGTATAAATATAAACATAGAAGTAGATACAGAACTCC AACCTAGAGATAGTATAGATATACATGTAGAAACAGACAAGAATTTACTAGAGTTTAGAAATATACAATTAAATAAAGAT AATAAGTGTATAAATCTAAATATAGATAGAGAAAATTTACAATTAGATAAATTTGAAAGTATATATACAAATAAAATAAC AGAAAAAGGATTATCTAAATATCAATTTATACAAAGTTTAAAATTAGAGAAAAACACAGGCATGGAAAAACATGATTATA GATTTTTAAATAGGATTTATTTTAAGGAAATTGACATGTATAAATTAAAGTTTTTTGAAAAGTATAGGGATAAGTATATA GATAAAGATAAATATAATTTTGTAGACAGAGTGAATTTTAAAAAAATAGATACTATAGAAAATCCAGATATTTTAAAAAG AATTGGTATAACTAAAATATTAAAATCTAATATTGTAAATAATTTAGATAGTATAACCATAAGAAGAATTAGTAAAGATT ACAATATTAGATTAATGCATAAGATACTACTTAAGAATATAGAAAAATACAAATATATAGATTGTTTAGATAGAATAAAT ATAAAATCTATAGATAAAGATAAGAATAAAAAGTATTTCTATAGAGAAGGGTTAAAGACTATAGATAAATATTATAATAG ATATTTAGATAGGGAGGCTATAATATCTATACATAGAGATAATGATAAATATTTAGATTATATGCCTTTAATAAATGTCT ATAAACAAATAGAAAAAGATTTATTAGATTTAACTATTTGGGATATATATAAAGAACATGATGAGCAATTACAAGGTACA CTCATGAAAAACATATATAAAGTAGGCAATAATAATAAATTTATTGAGGTGGCCAAAAGATGGTGGTGGCTAAATCCCAC AGATCCAATGGATAAATTAATTATTCCTAATAAAGACTATGAAAAAATGAAAGAGCTATTAGAAAATCCTAACTATGAAT ATCTAAGATATAATGACAATCCTATTGAATGGGGTAAATATTGGGGAATAGATTATAATATCCCACCTATGCCAGTATCA ATAGAAATAATGGTAGATTTAATAAATATATTAATAATGGTATGGCATAAAAATGTACAAGCTTGGATGTGTTGTAGTGG TAAAGAAGCTGTACAATTTATTATGGAATTATTATATGATTGGTATTCTTTAGATACATCCAAACCTAATAAAGACTATA TTAGAGCTTACAGGTGGGTTAGATGGGAAGCTGAAAAAGTATATTTCTTAAACGCTGAAAATGGATTACAAGCTATAGGA ATATTAATAGCTAACTTAATAGATTATATGAAATACCATCATTTTGATTTAGTCCCATTATGGAGAAATCCAAAAGCTAT GGATATAGAAAGAAACTTTAATAGGATAGTACAAAATGGAGATATTATGAAAGATTTAGACAAACTAAAGGGCAGTAGAC ACTATTGCATTGAAACGCAAAATTTTGAAAGAAAAAATATATTTGGAGAGTGA
Upstream 100 bases:
>100_bases TAAACTCACAGCACCTTTTAATTTTCTTAATAATAGTGCAAATATTAATTATTGTATAGCTATAAGGTGTTATAAAACAA CAGAATAGGAGGTTCTTTAT
Downstream 100 bases:
>100_bases TAATATGTTAGAAAGCACAATAGATTTTAAAAAACCAAGACAGAAGATGTGGGGAATATTAAAAGATAAACAACTAATAT CTTTACCATATGGACATGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 630; Mature: 629
Protein sequence:
>630_residues MPLHKIPLCSLKYVGDTHSGATFKYDITSKVLKHKEKLFYKDKIVEIDKTRGDKLLYKYFYNIEKKNNEYLYKENPIMVK EFEKELKLHDREINKDKSMPLEDTNIIEFNKKKSMQLGQKECININIEVDTELQPRDSIDIHVETDKNLLEFRNIQLNKD NKCINLNIDRENLQLDKFESIYTNKITEKGLSKYQFIQSLKLEKNTGMEKHDYRFLNRIYFKEIDMYKLKFFEKYRDKYI DKDKYNFVDRVNFKKIDTIENPDILKRIGITKILKSNIVNNLDSITIRRISKDYNIRLMHKILLKNIEKYKYIDCLDRIN IKSIDKDKNKKYFYREGLKTIDKYYNRYLDREAIISIHRDNDKYLDYMPLINVYKQIEKDLLDLTIWDIYKEHDEQLQGT LMKNIYKVGNNNKFIEVAKRWWWLNPTDPMDKLIIPNKDYEKMKELLENPNYEYLRYNDNPIEWGKYWGIDYNIPPMPVS IEIMVDLINILIMVWHKNVQAWMCCSGKEAVQFIMELLYDWYSLDTSKPNKDYIRAYRWVRWEAEKVYFLNAENGLQAIG ILIANLIDYMKYHHFDLVPLWRNPKAMDIERNFNRIVQNGDIMKDLDKLKGSRHYCIETQNFERKNIFGE
Sequences:
>Translated_630_residues MPLHKIPLCSLKYVGDTHSGATFKYDITSKVLKHKEKLFYKDKIVEIDKTRGDKLLYKYFYNIEKKNNEYLYKENPIMVK EFEKELKLHDREINKDKSMPLEDTNIIEFNKKKSMQLGQKECININIEVDTELQPRDSIDIHVETDKNLLEFRNIQLNKD NKCINLNIDRENLQLDKFESIYTNKITEKGLSKYQFIQSLKLEKNTGMEKHDYRFLNRIYFKEIDMYKLKFFEKYRDKYI DKDKYNFVDRVNFKKIDTIENPDILKRIGITKILKSNIVNNLDSITIRRISKDYNIRLMHKILLKNIEKYKYIDCLDRIN IKSIDKDKNKKYFYREGLKTIDKYYNRYLDREAIISIHRDNDKYLDYMPLINVYKQIEKDLLDLTIWDIYKEHDEQLQGT LMKNIYKVGNNNKFIEVAKRWWWLNPTDPMDKLIIPNKDYEKMKELLENPNYEYLRYNDNPIEWGKYWGIDYNIPPMPVS IEIMVDLINILIMVWHKNVQAWMCCSGKEAVQFIMELLYDWYSLDTSKPNKDYIRAYRWVRWEAEKVYFLNAENGLQAIG ILIANLIDYMKYHHFDLVPLWRNPKAMDIERNFNRIVQNGDIMKDLDKLKGSRHYCIETQNFERKNIFGE >Mature_629_residues PLHKIPLCSLKYVGDTHSGATFKYDITSKVLKHKEKLFYKDKIVEIDKTRGDKLLYKYFYNIEKKNNEYLYKENPIMVKE FEKELKLHDREINKDKSMPLEDTNIIEFNKKKSMQLGQKECININIEVDTELQPRDSIDIHVETDKNLLEFRNIQLNKDN KCINLNIDRENLQLDKFESIYTNKITEKGLSKYQFIQSLKLEKNTGMEKHDYRFLNRIYFKEIDMYKLKFFEKYRDKYID KDKYNFVDRVNFKKIDTIENPDILKRIGITKILKSNIVNNLDSITIRRISKDYNIRLMHKILLKNIEKYKYIDCLDRINI KSIDKDKNKKYFYREGLKTIDKYYNRYLDREAIISIHRDNDKYLDYMPLINVYKQIEKDLLDLTIWDIYKEHDEQLQGTL MKNIYKVGNNNKFIEVAKRWWWLNPTDPMDKLIIPNKDYEKMKELLENPNYEYLRYNDNPIEWGKYWGIDYNIPPMPVSI EIMVDLINILIMVWHKNVQAWMCCSGKEAVQFIMELLYDWYSLDTSKPNKDYIRAYRWVRWEAEKVYFLNAENGLQAIGI LIANLIDYMKYHHFDLVPLWRNPKAMDIERNFNRIVQNGDIMKDLDKLKGSRHYCIETQNFERKNIFGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 76437; Mature: 76306
Theoretical pI: Translated: 9.04; Mature: 9.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLHKIPLCSLKYVGDTHSGATFKYDITSKVLKHKEKLFYKDKIVEIDKTRGDKLLYKYF CCCCCCCCEEEEECCCCCCCCEEEEEHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHH YNIEKKNNEYLYKENPIMVKEFEKELKLHDREINKDKSMPLEDTNIIEFNKKKSMQLGQK HHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCHHHHCCCCC ECININIEVDTELQPRDSIDIHVETDKNLLEFRNIQLNKDNKCINLNIDRENLQLDKFES CEEEEEEEECCCCCCCCCEEEEEECCCCHHHHHCEEECCCCEEEEEEECCCCCCHHHHHH IYTNKITEKGLSKYQFIQSLKLEKNTGMEKHDYRFLNRIYFKEIDMYKLKFFEKYRDKYI HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DKDKYNFVDRVNFKKIDTIENPDILKRIGITKILKSNIVNNLDSITIRRISKDYNIRLMH CCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHEECCCCCCHHHHH KILLKNIEKYKYIDCLDRINIKSIDKDKNKKYFYREGLKTIDKYYNRYLDREAIISIHRD HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHEEEEECC NDKYLDYMPLINVYKQIEKDLLDLTIWDIYKEHDEQLQGTLMKNIYKVGNNNKFIEVAKR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHH WWWLNPTDPMDKLIIPNKDYEKMKELLENPNYEYLRYNDNPIEWGKYWGIDYNIPPMPVS HEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCEECCCCCCCCCCCH IEIMVDLINILIMVWHKNVQAWMCCSGKEAVQFIMELLYDWYSLDTSKPNKDYIRAYRWV HHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHE RWEAEKVYFLNAENGLQAIGILIANLIDYMKYHHFDLVPLWRNPKAMDIERNFNRIVQNG EEECCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEHHHHHHHHHCCC DIMKDLDKLKGSRHYCIETQNFERKNIFGE CHHHHHHHHCCCCEEEEECCCCCCCCCCCC >Mature Secondary Structure PLHKIPLCSLKYVGDTHSGATFKYDITSKVLKHKEKLFYKDKIVEIDKTRGDKLLYKYF CCCCCCCEEEEECCCCCCCCEEEEEHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHH YNIEKKNNEYLYKENPIMVKEFEKELKLHDREINKDKSMPLEDTNIIEFNKKKSMQLGQK HHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCHHHHCCCCC ECININIEVDTELQPRDSIDIHVETDKNLLEFRNIQLNKDNKCINLNIDRENLQLDKFES CEEEEEEEECCCCCCCCCEEEEEECCCCHHHHHCEEECCCCEEEEEEECCCCCCHHHHHH IYTNKITEKGLSKYQFIQSLKLEKNTGMEKHDYRFLNRIYFKEIDMYKLKFFEKYRDKYI HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DKDKYNFVDRVNFKKIDTIENPDILKRIGITKILKSNIVNNLDSITIRRISKDYNIRLMH CCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHEECCCCCCHHHHH KILLKNIEKYKYIDCLDRINIKSIDKDKNKKYFYREGLKTIDKYYNRYLDREAIISIHRD HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHEEEEECC NDKYLDYMPLINVYKQIEKDLLDLTIWDIYKEHDEQLQGTLMKNIYKVGNNNKFIEVAKR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHH WWWLNPTDPMDKLIIPNKDYEKMKELLENPNYEYLRYNDNPIEWGKYWGIDYNIPPMPVS HEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCEECCCCCCCCCCCH IEIMVDLINILIMVWHKNVQAWMCCSGKEAVQFIMELLYDWYSLDTSKPNKDYIRAYRWV HHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHE RWEAEKVYFLNAENGLQAIGILIANLIDYMKYHHFDLVPLWRNPKAMDIERNFNRIVQNG EEECCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEHHHHHHHHHCCC DIMKDLDKLKGSRHYCIETQNFERKNIFGE CHHHHHHHHCCCCEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA