Click here to switch to the map view.

The map label for this gene is 28210781

Identifier: 28210781

GI number: 28210781

Start: 1147821

End: 1148450

Strand: Direct

Name: 28210781

Synonym: CTC01080

Alternate gene names: NA

Gene position: 1147821-1148450 (Clockwise)

Preceding gene: 28210780

Following gene: 28210783

Centisome position: 41.0

GC content: 30.63

Gene sequence:

>630_bases
ATGAGTAAAATAAGGGTTATAGCAGACACAGGAGAATTGATACATGAAATAGAGTGTAGCCATTATAACATTCAATATGT
AACATCAGAAAGTGATGGGAAGATACAAAGGATAATTAATCTTAATAATGGCAAATATGGACCTAAGCACTGGATAAAAA
ATGATATTTATCAGCCTATAGCTAGAAAAATTAAAAAGAATCTTATAAATCAAGTTCCAGAGTTAAGTTGTGTAAATGTA
GATAAAATACTGTTTATTGAGGATATAGACTATGTATCTGATGAAATAAATAGAAATACTGATTGGGTGATGAAAATAAA
GAAAGCCCCATCACAATTAACTGAATTTACAGGATATAAATTTATTATAGAGAGCAGAGAATTCTGGATGGAAAGATGTT
CTCATGAACAGATAGTAGCTCATATCTATAGCTGCTTAAAACAAATAGATAAGGACAAGCTTAGGGAACCAGACGTTAAA
GGTTGGAAAGAGGTAATAGGTAACTTAGGATTAGGTTGGGAAACTACTATAAGCCCAATACCTAATCTTATGAATGGATT
TGATGTGGAAGATTTTAAAATGCTTAAGAAAGCAGACAAGCAAATGAAATTTGATTTAAGAGCAAAATAA

Upstream 100 bases:

>100_bases
CGTGGATAGTTAGAAGTCTTAAATACAGTGAAACAGGCTGGATTGAATATGATGAACTTCAAAAGGTTAGAAGAGAAGAA
AAGAAAGGAGCTAAAAATAA

Downstream 100 bases:

>100_bases
CAGAGGTGATGCAATGGCAGTAGATACAGTAGCAATAGCACAGGAAATATATACAGTTGCTAAGATTACAAAAGATTGGA
TAGGCTGGGAATATTGTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 209; Mature: 208

Protein sequence:

>209_residues
MSKIRVIADTGELIHEIECSHYNIQYVTSESDGKIQRIINLNNGKYGPKHWIKNDIYQPIARKIKKNLINQVPELSCVNV
DKILFIEDIDYVSDEINRNTDWVMKIKKAPSQLTEFTGYKFIIESREFWMERCSHEQIVAHIYSCLKQIDKDKLREPDVK
GWKEVIGNLGLGWETTISPIPNLMNGFDVEDFKMLKKADKQMKFDLRAK

Sequences:

>Translated_209_residues
MSKIRVIADTGELIHEIECSHYNIQYVTSESDGKIQRIINLNNGKYGPKHWIKNDIYQPIARKIKKNLINQVPELSCVNV
DKILFIEDIDYVSDEINRNTDWVMKIKKAPSQLTEFTGYKFIIESREFWMERCSHEQIVAHIYSCLKQIDKDKLREPDVK
GWKEVIGNLGLGWETTISPIPNLMNGFDVEDFKMLKKADKQMKFDLRAK
>Mature_208_residues
SKIRVIADTGELIHEIECSHYNIQYVTSESDGKIQRIINLNNGKYGPKHWIKNDIYQPIARKIKKNLINQVPELSCVNVD
KILFIEDIDYVSDEINRNTDWVMKIKKAPSQLTEFTGYKFIIESREFWMERCSHEQIVAHIYSCLKQIDKDKLREPDVKG
WKEVIGNLGLGWETTISPIPNLMNGFDVEDFKMLKKADKQMKFDLRAK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24480; Mature: 24348

Theoretical pI: Translated: 7.96; Mature: 7.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKIRVIADTGELIHEIECSHYNIQYVTSESDGKIQRIINLNNGKYGPKHWIKNDIYQPI
CCCEEEEECCHHHHHHHCCCCEEEEEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHHHH
ARKIKKNLINQVPELSCVNVDKILFIEDIDYVSDEINRNTDWVMKIKKAPSQLTEFTGYK
HHHHHHHHHHHCCCCCCCCCCCEEEEECHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHH
FIIESREFWMERCSHEQIVAHIYSCLKQIDKDKLREPDVKGWKEVIGNLGLGWETTISPI
EEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHH
PNLMNGFDVEDFKMLKKADKQMKFDLRAK
HHHHCCCCHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SKIRVIADTGELIHEIECSHYNIQYVTSESDGKIQRIINLNNGKYGPKHWIKNDIYQPI
CCEEEEECCHHHHHHHCCCCEEEEEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHHHH
ARKIKKNLINQVPELSCVNVDKILFIEDIDYVSDEINRNTDWVMKIKKAPSQLTEFTGYK
HHHHHHHHHHHCCCCCCCCCCCEEEEECHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHH
FIIESREFWMERCSHEQIVAHIYSCLKQIDKDKLREPDVKGWKEVIGNLGLGWETTISPI
EEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHH
PNLMNGFDVEDFKMLKKADKQMKFDLRAK
HHHHCCCCHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA