| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is 28210738
Identifier: 28210738
GI number: 28210738
Start: 1103797
End: 1105155
Strand: Direct
Name: 28210738
Synonym: CTC01034
Alternate gene names: NA
Gene position: 1103797-1105155 (Clockwise)
Preceding gene: 28210737
Following gene: 28210739
Centisome position: 39.43
GC content: 35.39
Gene sequence:
>1359_bases TTGATTAATTCATACGATATACTTGAAACTATAAGAATGATAGAAAAAGAAAAATTAGATATAAGAACTATAACCATGGG AATATCACTGTTAGATTGTGCAGACTTAGATGGAGAAAAGGCTAGAAGGAAGATTTACGATAAAATATGTAAGAATGCAG AAAGACTAGTAAAAACCGGAGAAGAAATAGAAGAGGAATATGGTATTCCAATAATACATAAAAGAATTTCAGTTACTCCA ATATCTATTATAGCAGGTGCATCTCAGGATACAAACTATGTAGAATTTGCTAAGGTATTAGATAAAGCAGCAAGTACTGT GGGAGTAAATTTCATAGGGGGATTTTCTTCATTAGTACAAAAAGGCTACACAAAAGGTGATAGAATTTTAATAGAATCTA TTCCTGAAGCATTAGCCAGTACTGAAAAAGTGTGTTCTTCAGTAAATATAGGTTGCACTAAAAGCGGTATAAATATGGAT GCTGTTAAACAAATGGGAGAAATTATAAAGAAAACTGCAGAACTTACAAAGGAAAATGCAGGCATAGGAAGTGCAAAACT TGTTGTGTTTGCAAATGCTGTAGAAGACAATCCTTTCATGGCAGGAGCCTTTCACGGTGTTGGAGAAGGAGATTGCGTAA TAAATGTAGGTGTTAGTGGACCAGGGGTTGTTAAAGCAGCCTTAGAACATGTAAAGGGACAAAGTTTTGATGTAGTTGCA GAAACTATAAAGAAAACATCCTTTAAGATTACAAGAATGGGACAATTAGTAGCTAAAGAAGCATCTAGAAGATTAAATGT ACCTTTTGGTATAGTAGACTTATCCTTAGCCCCAACTCCTTTTGTGGGAGATAGTGTTGCTCATATTTTAGAAGAGATGG GACTTGAGAGATGTGGAGCACCAGGAACTACAGCAGCCCTTGCACTTTTAAATGATGCTGTTAAAAAAGGAGGAGTAATG GCTTGTAGTCATGTTGGCGGTTTAAGTGGAGCTTTTATACCTGTTAGCGAAGATATTGGAATGATTGATGCTGTAAATAA AGGAGCATTATCTATAGAAAAGCTAGAAGCTATGACTTGTGTATGCTCTGTTGGATTAGATATGATAGCAATACCAGGAG ATACTTCTGCAGAAACCATATCTGGTATTATAGCAGATGAGGCTGCTATTGGAGTTATAAACAATAAAACTACAGCAGTA AGAATTATACCAGTGCCAGGAAAAGGTTTAGGCGATGAAGTAGAGTTTGGAGGACTTTTAGGAAGAGCTCCAATTATGAA AGTTAGCAAATTTTCAAGTGTAGACTTTGTAAAAAGAGGAGGAAGAATTCCTGCACCTATACATAGCTTTAAAAACTAA
Upstream 100 bases:
>100_bases GAGTTAATTAAAAAGGGAGAAGAATTAAAGGTTTCTATAAAAGTTCAACACGAAGATATATTTAATTCTATGCACAGAAT ATAGAAAAGGGGGACTATAA
Downstream 100 bases:
>100_bases GGGGTGATTTTTATGAGTGAAAGACTAGTATACAGCGGATGGCTAAAATTATATAAAAGGTTAATTGGAAATAAAGAATA TGAAATTTTAAAAAATCATG
Product: hypothetical protein
Products: glycerone phosphate; NADH; NADPH; H+
Alternate protein names: NA
Number of amino acids: Translated: 452; Mature: 452
Protein sequence:
>452_residues MINSYDILETIRMIEKEKLDIRTITMGISLLDCADLDGEKARRKIYDKICKNAERLVKTGEEIEEEYGIPIIHKRISVTP ISIIAGASQDTNYVEFAKVLDKAASTVGVNFIGGFSSLVQKGYTKGDRILIESIPEALASTEKVCSSVNIGCTKSGINMD AVKQMGEIIKKTAELTKENAGIGSAKLVVFANAVEDNPFMAGAFHGVGEGDCVINVGVSGPGVVKAALEHVKGQSFDVVA ETIKKTSFKITRMGQLVAKEASRRLNVPFGIVDLSLAPTPFVGDSVAHILEEMGLERCGAPGTTAALALLNDAVKKGGVM ACSHVGGLSGAFIPVSEDIGMIDAVNKGALSIEKLEAMTCVCSVGLDMIAIPGDTSAETISGIIADEAAIGVINNKTTAV RIIPVPGKGLGDEVEFGGLLGRAPIMKVSKFSSVDFVKRGGRIPAPIHSFKN
Sequences:
>Translated_452_residues MINSYDILETIRMIEKEKLDIRTITMGISLLDCADLDGEKARRKIYDKICKNAERLVKTGEEIEEEYGIPIIHKRISVTP ISIIAGASQDTNYVEFAKVLDKAASTVGVNFIGGFSSLVQKGYTKGDRILIESIPEALASTEKVCSSVNIGCTKSGINMD AVKQMGEIIKKTAELTKENAGIGSAKLVVFANAVEDNPFMAGAFHGVGEGDCVINVGVSGPGVVKAALEHVKGQSFDVVA ETIKKTSFKITRMGQLVAKEASRRLNVPFGIVDLSLAPTPFVGDSVAHILEEMGLERCGAPGTTAALALLNDAVKKGGVM ACSHVGGLSGAFIPVSEDIGMIDAVNKGALSIEKLEAMTCVCSVGLDMIAIPGDTSAETISGIIADEAAIGVINNKTTAV RIIPVPGKGLGDEVEFGGLLGRAPIMKVSKFSSVDFVKRGGRIPAPIHSFKN >Mature_452_residues MINSYDILETIRMIEKEKLDIRTITMGISLLDCADLDGEKARRKIYDKICKNAERLVKTGEEIEEEYGIPIIHKRISVTP ISIIAGASQDTNYVEFAKVLDKAASTVGVNFIGGFSSLVQKGYTKGDRILIESIPEALASTEKVCSSVNIGCTKSGINMD AVKQMGEIIKKTAELTKENAGIGSAKLVVFANAVEDNPFMAGAFHGVGEGDCVINVGVSGPGVVKAALEHVKGQSFDVVA ETIKKTSFKITRMGQLVAKEASRRLNVPFGIVDLSLAPTPFVGDSVAHILEEMGLERCGAPGTTAALALLNDAVKKGGVM ACSHVGGLSGAFIPVSEDIGMIDAVNKGALSIEKLEAMTCVCSVGLDMIAIPGDTSAETISGIIADEAAIGVINNKTTAV RIIPVPGKGLGDEVEFGGLLGRAPIMKVSKFSSVDFVKRGGRIPAPIHSFKN
Specific function: Unknown
COG id: COG2848
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0210 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007841 [H]
Pfam domain/function: PF05167 DUF711 [H]
EC number: 1.1.1.94
Molecular weight: Translated: 47611; Mature: 47611
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINSYDILETIRMIEKEKLDIRTITMGISLLDCADLDGEKARRKIYDKICKNAERLVKTG CCCCHHHHHHHHHHHHHCCCEEEEEECCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCH EEIEEEYGIPIIHKRISVTPISIIAGASQDTNYVEFAKVLDKAASTVGVNFIGGFSSLVQ HHHHHHCCCCEEEEEEECCEEEEEECCCCCCCHHHHHHHHHHHHHHHCHHHHCCHHHHHH KGYTKGDRILIESIPEALASTEKVCSSVNIGCTKSGINMDAVKQMGEIIKKTAELTKENA HCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC GIGSAKLVVFANAVEDNPFMAGAFHGVGEGDCVINVGVSGPGVVKAALEHVKGQSFDVVA CCCCEEEEEEEECCCCCCEEEEECCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCHHHHH ETIKKTSFKITRMGQLVAKEASRRLNVPFGIVDLSLAPTPFVGDSVAHILEEMGLERCGA HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCHHHCCC PGTTAALALLNDAVKKGGVMACSHVGGLSGAFIPVSEDIGMIDAVNKGALSIEKLEAMTC CCHHHHHHHHHHHHHCCCCEEECCCCCCCCCEEECCCCCCCHHCCCCCCCHHHHHHHHHH VCSVGLDMIAIPGDTSAETISGIIADEAAIGVINNKTTAVRIIPVPGKGLGDEVEFGGLL HHHCCCCEEEECCCCCHHHHHHHHHCCCEEEEEECCCEEEEEEECCCCCCCCCCCCCCHH GRAPIMKVSKFSSVDFVKRGGRIPAPIHSFKN CCCCHHHHHHCCCHHHHHCCCCCCCCHHCCCC >Mature Secondary Structure MINSYDILETIRMIEKEKLDIRTITMGISLLDCADLDGEKARRKIYDKICKNAERLVKTG CCCCHHHHHHHHHHHHHCCCEEEEEECCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCH EEIEEEYGIPIIHKRISVTPISIIAGASQDTNYVEFAKVLDKAASTVGVNFIGGFSSLVQ HHHHHHCCCCEEEEEEECCEEEEEECCCCCCCHHHHHHHHHHHHHHHCHHHHCCHHHHHH KGYTKGDRILIESIPEALASTEKVCSSVNIGCTKSGINMDAVKQMGEIIKKTAELTKENA HCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC GIGSAKLVVFANAVEDNPFMAGAFHGVGEGDCVINVGVSGPGVVKAALEHVKGQSFDVVA CCCCEEEEEEEECCCCCCEEEEECCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCHHHHH ETIKKTSFKITRMGQLVAKEASRRLNVPFGIVDLSLAPTPFVGDSVAHILEEMGLERCGA HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCHHHCCC PGTTAALALLNDAVKKGGVMACSHVGGLSGAFIPVSEDIGMIDAVNKGALSIEKLEAMTC CCHHHHHHHHHHHHHCCCCEEECCCCCCCCCEEECCCCCCCHHCCCCCCCHHHHHHHHHH VCSVGLDMIAIPGDTSAETISGIIADEAAIGVINNKTTAVRIIPVPGKGLGDEVEFGGLL HHHCCCCEEEECCCCCHHHHHHHHHCCCEEEEEECCCEEEEEEECCCCCCCCCCCCCCHH GRAPIMKVSKFSSVDFVKRGGRIPAPIHSFKN CCCCHHHHHHCCCHHHHHCCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: sn-glycerol 3-phosphate; NAD+; NADP+
Specific reaction: sn-glycerol 3-phosphate + NAD(P)+ = glycerone phosphate + NAD(P)H + H+
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA