| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is 28210720
Identifier: 28210720
GI number: 28210720
Start: 1084725
End: 1085048
Strand: Direct
Name: 28210720
Synonym: CTC01015
Alternate gene names: NA
Gene position: 1084725-1085048 (Clockwise)
Preceding gene: 28210719
Following gene: 28210724
Centisome position: 38.75
GC content: 39.81
Gene sequence:
>324_bases ATGCCTATTGGAGAAGATACTTTTGCAGATCACTTGGAAGATTTTGTGGGAAAAGTAGTTACAATCTTTACTACTAGCGG AGGAGATTCAGGAGCTGGATTTACAGGAGTTCTTTTAGCAGTTAATGAAGATTTTGTAAGACTTTTAACTAGAATGGGAC CAGCACCTGCATGTGCTCTTGGAAACTGTTGTTCAGGTATTCAAGAGGGTGTAGAACCCGGACAAAGTGTACCAGGAGGA CCTATTTGTGGAGGAACTAACACTGGATCAATAGCAGATATTCCTATTGATAGAATAGCATCCTTTGCTCATAATACCAT ATAG
Upstream 100 bases:
>100_bases ACATAAAAATATTAAAAGTAACAATTTAAGATTAAAAACATAATATAGAGTAAAGACTAAAAAGAGTCTGAAAATATACT ACTATAGGAGGTAAAGTGAA
Downstream 100 bases:
>100_bases ATTTATTTAATATAATAAGAAACTAAAGAAATTTTAAAATAAAAAAGCTAGTTGATATATTAATAAAAAACTAATATATC CAACTAGTTTTTTATCGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 107; Mature: 106
Protein sequence:
>107_residues MPIGEDTFADHLEDFVGKVVTIFTTSGGDSGAGFTGVLLAVNEDFVRLLTRMGPAPACALGNCCSGIQEGVEPGQSVPGG PICGGTNTGSIADIPIDRIASFAHNTI
Sequences:
>Translated_107_residues MPIGEDTFADHLEDFVGKVVTIFTTSGGDSGAGFTGVLLAVNEDFVRLLTRMGPAPACALGNCCSGIQEGVEPGQSVPGG PICGGTNTGSIADIPIDRIASFAHNTI >Mature_106_residues PIGEDTFADHLEDFVGKVVTIFTTSGGDSGAGFTGVLLAVNEDFVRLLTRMGPAPACALGNCCSGIQEGVEPGQSVPGGP ICGGTNTGSIADIPIDRIASFAHNTI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10823; Mature: 10692
Theoretical pI: Translated: 4.02; Mature: 4.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIGEDTFADHLEDFVGKVVTIFTTSGGDSGAGFTGVLLAVNEDFVRLLTRMGPAPACAL CCCCCHHHHHHHHHHHHHEEEEEECCCCCCCCCCEEEEEEECHHHHHHHHHCCCCCHHHH GNCCSGIQEGVEPGQSVPGGPICGGTNTGSIADIPIDRIASFAHNTI HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCC >Mature Secondary Structure PIGEDTFADHLEDFVGKVVTIFTTSGGDSGAGFTGVLLAVNEDFVRLLTRMGPAPACAL CCCCHHHHHHHHHHHHHEEEEEECCCCCCCCCCEEEEEEECHHHHHHHHHCCCCCHHHH GNCCSGIQEGVEPGQSVPGGPICGGTNTGSIADIPIDRIASFAHNTI HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA