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The map label for this gene is apeA [H]

Identifier: 28210717

GI number: 28210717

Start: 1081442

End: 1082842

Strand: Direct

Name: apeA [H]

Synonym: CTC01012

Alternate gene names: 28210717

Gene position: 1081442-1082842 (Clockwise)

Preceding gene: 28210716

Following gene: 28210719

Centisome position: 38.63

GC content: 30.41

Gene sequence:

>1401_bases
ATGAAACAAAATATTTTAGAAAAAAAATATAATTATGTTTGGAATAATTATGATGAAAATGATATGAAAAATGTATTTGA
AATAGCTGAAAGATATAAGAGATTTTTATCAGAATGTAAAACAGAAAGAGAGTGTATAAAAGAATTTATAAAAATAGCAG
AAGAAAACGAATATAAAAATTTAGAAGATATATTTAGAAAAGGTGAAAAATTAAATCCAGGACAAAAGGTATATGTAAAT
AATAAAGATAAGACATTAGCTTTATTTGTAATTGGTAAAAAACCTATGGTGGAAGGAATGAATATACTTGGAGCTCATGT
GGATTCTCCACGATTGGATTTAAAACAAAATCCTCTTTATGAAGATACAGATTTGGCTTTTTTTGAAACTCATTACTATG
GCGGTATAAAAAAATATCAATGGGTAACACTTCCTTTAGCATTGCACGGAGTGGTTGTTAAAAAAGATGGAACTAAAAAA
GAAATAGTAATAGGAGAAGAGGATGATGAGCCAGTTATAGGAATATCAGATCTTTTAATTCATCTAGCAGGAGATCAACT
AGAAAAGAAGTTAAAAAAGGGAATAGAAGGAGAAGATTTAAATATACTAATAGGAAGTATTCCATTAAAGAATGGAGAGT
CAAAAAATCCTGTTAAAGATAATATTTTAAAAATATTAAATGAAAAATATGATATATGCGAAGAAGACTTTGTATCAGCA
GAATTGGAAGTTGTACCTGCGGGAAAAGCTAGAGATTATGGATTAGACAAAAGTATGGTAATAGGTTATGGTCAAGATGA
TAGAATTTGTTCCTATACTTCTTTTGAAGCTATAATGAGTTTAGAAAATACTGAAAAAACTTGTATTACTTTATTAGTTG
ATAAAGAGGAAATAGGAAGCGTTGGGGCTACAGGTATGCAATCGAAGTTCTTTGAAAATGCTGTAGCTGAAGTAATGGAT
TGTTCTAATCAATATAGTGAATTAAATTTAAGAAAAGCCTTAGCTAATTCTAGAATGCTATCTGCTGATGTAAGTGCAGC
CTATGATCCAAATTATCCATCAGTAATGGAAAAAAGAAATGCGGCTTATTTTGGAAAAGGATTAGTATTTAATAAATATA
CAGGAGCTAGAGGAAAATCTGGTTGTAATGATGCTAATCCAGAATTTATTGCAGAACTAAGACGGATTATGGATGAACAC
AATGTGTATTGGCAAACAGCTGAACTTGGAAAAGTAGATCAAGGTGGAGGGGGGACTATAGCCTATATATTAGCTCACTA
TGGAATGGAAGTTATAGACTGTGGTATAGCTCTTCAAAATATGCATGCTCCTTGGGAAGTAGCAAGCAAGGCAGATATAT
ATGAAGCCTTAAAAGGATACTATGCATTTTTGATTAGCTAA

Upstream 100 bases:

>100_bases
ATGAATGGGATGTAAGAATTAATGATATAATAGTAAATGAGTAAATTTAAACCTAAATATATAAATGGAGGTGAATACTC
TAATTAATTAGAGTGCGGAT

Downstream 100 bases:

>100_bases
CCAAAAATAGTGAATAACTAATAGTGAATAGTGAATAACTAAGGAGAACTTTTCCAGATAGTCATTACGAAAAGTTTTTA
ATTGTATATAATTCATGTTC

Product: putative aminopeptidase 1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 466; Mature: 466

Protein sequence:

>466_residues
MKQNILEKKYNYVWNNYDENDMKNVFEIAERYKRFLSECKTERECIKEFIKIAEENEYKNLEDIFRKGEKLNPGQKVYVN
NKDKTLALFVIGKKPMVEGMNILGAHVDSPRLDLKQNPLYEDTDLAFFETHYYGGIKKYQWVTLPLALHGVVVKKDGTKK
EIVIGEEDDEPVIGISDLLIHLAGDQLEKKLKKGIEGEDLNILIGSIPLKNGESKNPVKDNILKILNEKYDICEEDFVSA
ELEVVPAGKARDYGLDKSMVIGYGQDDRICSYTSFEAIMSLENTEKTCITLLVDKEEIGSVGATGMQSKFFENAVAEVMD
CSNQYSELNLRKALANSRMLSADVSAAYDPNYPSVMEKRNAAYFGKGLVFNKYTGARGKSGCNDANPEFIAELRRIMDEH
NVYWQTAELGKVDQGGGGTIAYILAHYGMEVIDCGIALQNMHAPWEVASKADIYEALKGYYAFLIS

Sequences:

>Translated_466_residues
MKQNILEKKYNYVWNNYDENDMKNVFEIAERYKRFLSECKTERECIKEFIKIAEENEYKNLEDIFRKGEKLNPGQKVYVN
NKDKTLALFVIGKKPMVEGMNILGAHVDSPRLDLKQNPLYEDTDLAFFETHYYGGIKKYQWVTLPLALHGVVVKKDGTKK
EIVIGEEDDEPVIGISDLLIHLAGDQLEKKLKKGIEGEDLNILIGSIPLKNGESKNPVKDNILKILNEKYDICEEDFVSA
ELEVVPAGKARDYGLDKSMVIGYGQDDRICSYTSFEAIMSLENTEKTCITLLVDKEEIGSVGATGMQSKFFENAVAEVMD
CSNQYSELNLRKALANSRMLSADVSAAYDPNYPSVMEKRNAAYFGKGLVFNKYTGARGKSGCNDANPEFIAELRRIMDEH
NVYWQTAELGKVDQGGGGTIAYILAHYGMEVIDCGIALQNMHAPWEVASKADIYEALKGYYAFLIS
>Mature_466_residues
MKQNILEKKYNYVWNNYDENDMKNVFEIAERYKRFLSECKTERECIKEFIKIAEENEYKNLEDIFRKGEKLNPGQKVYVN
NKDKTLALFVIGKKPMVEGMNILGAHVDSPRLDLKQNPLYEDTDLAFFETHYYGGIKKYQWVTLPLALHGVVVKKDGTKK
EIVIGEEDDEPVIGISDLLIHLAGDQLEKKLKKGIEGEDLNILIGSIPLKNGESKNPVKDNILKILNEKYDICEEDFVSA
ELEVVPAGKARDYGLDKSMVIGYGQDDRICSYTSFEAIMSLENTEKTCITLLVDKEEIGSVGATGMQSKFFENAVAEVMD
CSNQYSELNLRKALANSRMLSADVSAAYDPNYPSVMEKRNAAYFGKGLVFNKYTGARGKSGCNDANPEFIAELRRIMDEH
NVYWQTAELGKVDQGGGGTIAYILAHYGMEVIDCGIALQNMHAPWEVASKADIYEALKGYYAFLIS

Specific function: Unknown

COG id: COG1362

COG function: function code E; Aspartyl aminopeptidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M18 family [H]

Homologues:

Organism=Caenorhabditis elegans, GI17552916, Length=418, Percent_Identity=26.0765550239234, Blast_Score=93, Evalue=3e-19,
Organism=Saccharomyces cerevisiae, GI6322746, Length=465, Percent_Identity=24.3010752688172, Blast_Score=105, Evalue=2e-23,
Organism=Saccharomyces cerevisiae, GI6321905, Length=468, Percent_Identity=24.5726495726496, Blast_Score=79, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022983
- InterPro:   IPR001948 [H]

Pfam domain/function: PF02127 Peptidase_M18 [H]

EC number: NA

Molecular weight: Translated: 52589; Mature: 52589

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQNILEKKYNYVWNNYDENDMKNVFEIAERYKRFLSECKTERECIKEFIKIAEENEYKN
CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
LEDIFRKGEKLNPGQKVYVNNKDKTLALFVIGKKPMVEGMNILGAHVDSPRLDLKQNPLY
HHHHHHCCCCCCCCCEEEECCCCCEEEEEEECCCCHHHCCHHHCCCCCCCCCCCCCCCCC
EDTDLAFFETHYYGGIKKYQWVTLPLALHGVVVKKDGTKKEIVIGEEDDEPVIGISDLLI
CCCCCEEEEHHHHCCCCEEEEEEEEEEEEEEEEECCCCCCEEEECCCCCCCEEEHHHHHH
HLAGDQLEKKLKKGIEGEDLNILIGSIPLKNGESKNPVKDNILKILNEKYDICEEDFVSA
HHCCHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCHHHHCCC
ELEVVPAGKARDYGLDKSMVIGYGQDDRICSYTSFEAIMSLENTEKTCITLLVDKEEIGS
EEEEEECCCCCCCCCCCCEEEEECCCCCEECHHHHHHHHHHCCCCCEEEEEEECHHHHCC
VGATGMQSKFFENAVAEVMDCSNQYSELNLRKALANSRMLSADVSAAYDPNYPSVMEKRN
CCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHHCC
AAYFGKGLVFNKYTGARGKSGCNDANPEFIAELRRIMDEHNVYWQTAELGKVDQGGGGTI
CHHCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHH
AYILAHYGMEVIDCGIALQNMHAPWEVASKADIYEALKGYYAFLIS
HHHHHHHCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKQNILEKKYNYVWNNYDENDMKNVFEIAERYKRFLSECKTERECIKEFIKIAEENEYKN
CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
LEDIFRKGEKLNPGQKVYVNNKDKTLALFVIGKKPMVEGMNILGAHVDSPRLDLKQNPLY
HHHHHHCCCCCCCCCEEEECCCCCEEEEEEECCCCHHHCCHHHCCCCCCCCCCCCCCCCC
EDTDLAFFETHYYGGIKKYQWVTLPLALHGVVVKKDGTKKEIVIGEEDDEPVIGISDLLI
CCCCCEEEEHHHHCCCCEEEEEEEEEEEEEEEEECCCCCCEEEECCCCCCCEEEHHHHHH
HLAGDQLEKKLKKGIEGEDLNILIGSIPLKNGESKNPVKDNILKILNEKYDICEEDFVSA
HHCCHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCHHHHCCC
ELEVVPAGKARDYGLDKSMVIGYGQDDRICSYTSFEAIMSLENTEKTCITLLVDKEEIGS
EEEEEECCCCCCCCCCCCEEEEECCCCCEECHHHHHHHHHHCCCCCEEEEEEECHHHHCC
VGATGMQSKFFENAVAEVMDCSNQYSELNLRKALANSRMLSADVSAAYDPNYPSVMEKRN
CCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHHCC
AAYFGKGLVFNKYTGARGKSGCNDANPEFIAELRRIMDEHNVYWQTAELGKVDQGGGGTI
CHHCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHH
AYILAHYGMEVIDCGIALQNMHAPWEVASKADIYEALKGYYAFLIS
HHHHHHHCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11466286 [H]