| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is lctP [H]
Identifier: 28210680
GI number: 28210680
Start: 1038823
End: 1040343
Strand: Direct
Name: lctP [H]
Synonym: CTC00972
Alternate gene names: 28210680
Gene position: 1038823-1040343 (Clockwise)
Preceding gene: 28210679
Following gene: 28210681
Centisome position: 37.11
GC content: 33.33
Gene sequence:
>1521_bases ATGAATAGTTATTTGTTATTTTTTATTGCCATGATACCTATTGTCTGTTTGATGGTTGCCTTAGGAGTTTTTAAAATCTC TGCCCATAAAGCTTGTCCTGCGGTTTTGGTTATAACTTTTGTTTTGGCAATGCTATTTTGGAAAATGAGATTTATAGATG CTTTTACTGCAATTTTAGAAGGGGGAGCTTTAGGATTATGGCCCATAATGTTGGTCATAATATCTGCAGTATTTATTTAC AACGTATCCATAAAGACAGGGAGTATGGAAACCATAAAAAACATGATAACTGGTATTACTAATGATAAGCGCATATTAGT ACTTATATTAGCTTGGGGTTTTGGGGGATTTCTAGAAGCAATTGCAGGCTTTGGAACAGCAGTTGCAATACCTGCAAGCA TTATGGCAGCTTTGGGTTTTGATCCAGTTTTCGCGGCTATTATTTGTCTAATTGCCAATACTACACCTACAGCTTTTGGA GCTATAGGAATACCTATTACAACTTTAGCAAAAATAACAGGACTAGATGTTAATATCTTAAGCTATGCTGTTGGTCTACA ATTATCAGGACTAATAGTAATAGTACCTATACTTTTAGTTATGCTTGCTGGAAGAAGTGTAAAAGCTATAAAAGGAGTTT TTGGAATATCCATTATGTCTGGACTAGCCTTTGCAATACCAGAAGTACTACTAGCTAAATACATGGGTGCAGAATTACCT GCAATTGTAGGTAGTCTCTGTAGCATGATCGTTACAATTCTTATTGCAAAAACATTCTATAAAGACACAGCGATAAAAGA AAATAAGATTCCTATGGAAGATATTCTACTATCATGGCTGTCCTTTATATTGGTTTTTGTATTCATATTATTTTCAAGTT CATTATTCCCTACAATTAATAAACTACTCTCATCTGTAAGTACATCTTTAAATATATATACAGGACAAGATGCGGAACCA TATACTTTTCTTTGGATAGCAACACCAGGAACACTTATTATAATTGCAACATTTATTGGAGGAGTGATTCAAGGAGCTAA AGTTAAAGAGATATTTGATATTTTAGTAGGTACCTTTAAACAAATGAAAAATTCCTTTATAACTATTTTATCCATAGTGG CATTAGCCAAAGTTATGGGATACAGTGGAATGATAAAATCAATAGCTGTAGTTTTAGTATTAATTACAGGAGACTTTTAT CCATTATTTGCACCATTGATTGGAGCTTTAGGCACCTTTGTAACAGGAAGTGATACTTCAGCCAATGTATTATTTGGAGG ATTACAAGTAGAAGTTGCAAATAGTCTTAACTTGAATCCTTATTGGCTAGCAGCGGCAAATACAGGAGGTGCAACAGCTG GTAAAATGATATCGCCTCAAAGTATTGCAGTGGCAACAGCAGCAACTGGATTAGAAGGTACTGAAGGATATATTTTAAAA GCTACACTAAAATTTTGTATATTTTACGTAGTAATTTTAGGACTAATATCTTATTTAGGAGGATCATTATTTAATATTTA A
Upstream 100 bases:
>100_bases TTTTTATTTTAAAATATATAGCAATGTTCTAAAAATTGTGATAATATATATTTAACTGGTACTATGGTATGACCAGTAAC ATTAAATAAGGAGAGGTAAT
Downstream 100 bases:
>100_bases ATGTAATAAAGAATATTAATTTAAATCTAAAAAATAGGGGGTATTAATATGAGAATATTGGTATGTATTAAACAAGTACC TGGAACTTCTAAAGTGGAAG
Product: L-lactate permease
Products: lactate [Cytoplasm]; Proton [Cytoplasm]; glycolate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 506; Mature: 506
Protein sequence:
>506_residues MNSYLLFFIAMIPIVCLMVALGVFKISAHKACPAVLVITFVLAMLFWKMRFIDAFTAILEGGALGLWPIMLVIISAVFIY NVSIKTGSMETIKNMITGITNDKRILVLILAWGFGGFLEAIAGFGTAVAIPASIMAALGFDPVFAAIICLIANTTPTAFG AIGIPITTLAKITGLDVNILSYAVGLQLSGLIVIVPILLVMLAGRSVKAIKGVFGISIMSGLAFAIPEVLLAKYMGAELP AIVGSLCSMIVTILIAKTFYKDTAIKENKIPMEDILLSWLSFILVFVFILFSSSLFPTINKLLSSVSTSLNIYTGQDAEP YTFLWIATPGTLIIIATFIGGVIQGAKVKEIFDILVGTFKQMKNSFITILSIVALAKVMGYSGMIKSIAVVLVLITGDFY PLFAPLIGALGTFVTGSDTSANVLFGGLQVEVANSLNLNPYWLAAANTGGATAGKMISPQSIAVATAATGLEGTEGYILK ATLKFCIFYVVILGLISYLGGSLFNI
Sequences:
>Translated_506_residues MNSYLLFFIAMIPIVCLMVALGVFKISAHKACPAVLVITFVLAMLFWKMRFIDAFTAILEGGALGLWPIMLVIISAVFIY NVSIKTGSMETIKNMITGITNDKRILVLILAWGFGGFLEAIAGFGTAVAIPASIMAALGFDPVFAAIICLIANTTPTAFG AIGIPITTLAKITGLDVNILSYAVGLQLSGLIVIVPILLVMLAGRSVKAIKGVFGISIMSGLAFAIPEVLLAKYMGAELP AIVGSLCSMIVTILIAKTFYKDTAIKENKIPMEDILLSWLSFILVFVFILFSSSLFPTINKLLSSVSTSLNIYTGQDAEP YTFLWIATPGTLIIIATFIGGVIQGAKVKEIFDILVGTFKQMKNSFITILSIVALAKVMGYSGMIKSIAVVLVLITGDFY PLFAPLIGALGTFVTGSDTSANVLFGGLQVEVANSLNLNPYWLAAANTGGATAGKMISPQSIAVATAATGLEGTEGYILK ATLKFCIFYVVILGLISYLGGSLFNI >Mature_506_residues MNSYLLFFIAMIPIVCLMVALGVFKISAHKACPAVLVITFVLAMLFWKMRFIDAFTAILEGGALGLWPIMLVIISAVFIY NVSIKTGSMETIKNMITGITNDKRILVLILAWGFGGFLEAIAGFGTAVAIPASIMAALGFDPVFAAIICLIANTTPTAFG AIGIPITTLAKITGLDVNILSYAVGLQLSGLIVIVPILLVMLAGRSVKAIKGVFGISIMSGLAFAIPEVLLAKYMGAELP AIVGSLCSMIVTILIAKTFYKDTAIKENKIPMEDILLSWLSFILVFVFILFSSSLFPTINKLLSSVSTSLNIYTGQDAEP YTFLWIATPGTLIIIATFIGGVIQGAKVKEIFDILVGTFKQMKNSFITILSIVALAKVMGYSGMIKSIAVVLVLITGDFY PLFAPLIGALGTFVTGSDTSANVLFGGLQVEVANSLNLNPYWLAAANTGGATAGKMISPQSIAVATAATGLEGTEGYILK ATLKFCIFYVVILGLISYLGGSLFNI
Specific function: Plays a role in L-lactate utilization [H]
COG id: COG1620
COG function: function code C; L-lactate permease
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lactate permease family [H]
Homologues:
Organism=Escherichia coli, GI1789347, Length=540, Percent_Identity=34.6296296296296, Blast_Score=269, Evalue=2e-73, Organism=Escherichia coli, GI1790031, Length=532, Percent_Identity=34.0225563909774, Blast_Score=254, Evalue=8e-69,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003804 [H]
Pfam domain/function: PF02652 Lactate_perm [H]
EC number: NA
Molecular weight: Translated: 53598; Mature: 53598
Theoretical pI: Translated: 8.84; Mature: 8.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSYLLFFIAMIPIVCLMVALGVFKISAHKACPAVLVITFVLAMLFWKMRFIDAFTAILE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC GGALGLWPIMLVIISAVFIYNVSIKTGSMETIKNMITGITNDKRILVLILAWGFGGFLEA CCCHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHCCCCCCEEEEEEEHHCHHHHHHH IAGFGTAVAIPASIMAALGFDPVFAAIICLIANTTPTAFGAIGIPITTLAKITGLDVNIL HHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHCCCCCCHHHHHHHCCCCHHHH SYAVGLQLSGLIVIVPILLVMLAGRSVKAIKGVFGISIMSGLAFAIPEVLLAKYMGAELP HHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH AIVGSLCSMIVTILIAKTFYKDTAIKENKIPMEDILLSWLSFILVFVFILFSSSLFPTIN HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHH KLLSSVSTSLNIYTGQDAEPYTFLWIATPGTLIIIATFIGGVIQGAKVKEIFDILVGTFK HHHHHHHHCEEEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH QMKNSFITILSIVALAKVMGYSGMIKSIAVVLVLITGDFYPLFAPLIGALGTFVTGSDTS HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCC ANVLFGGLQVEVANSLNLNPYWLAAANTGGATAGKMISPQSIAVATAATGLEGTEGYILK CCEEEECEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHH ATLKFCIFYVVILGLISYLGGSLFNI HHHHHHHHHHHHHHHHHHHCCHHCCC >Mature Secondary Structure MNSYLLFFIAMIPIVCLMVALGVFKISAHKACPAVLVITFVLAMLFWKMRFIDAFTAILE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC GGALGLWPIMLVIISAVFIYNVSIKTGSMETIKNMITGITNDKRILVLILAWGFGGFLEA CCCHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHCCCCCCEEEEEEEHHCHHHHHHH IAGFGTAVAIPASIMAALGFDPVFAAIICLIANTTPTAFGAIGIPITTLAKITGLDVNIL HHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHCCCCCCHHHHHHHCCCCHHHH SYAVGLQLSGLIVIVPILLVMLAGRSVKAIKGVFGISIMSGLAFAIPEVLLAKYMGAELP HHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH AIVGSLCSMIVTILIAKTFYKDTAIKENKIPMEDILLSWLSFILVFVFILFSSSLFPTIN HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHH KLLSSVSTSLNIYTGQDAEPYTFLWIATPGTLIIIATFIGGVIQGAKVKEIFDILVGTFK HHHHHHHHCEEEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH QMKNSFITILSIVALAKVMGYSGMIKSIAVVLVLITGDFYPLFAPLIGALGTFVTGSDTS HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCC ANVLFGGLQVEVANSLNLNPYWLAAANTGGATAGKMISPQSIAVATAATGLEGTEGYILK CCEEEECEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHH ATLKFCIFYVVILGLISYLGGSLFNI HHHHHHHHHHHHHHHHHHHCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: lactate [Periplasm]; Proton [Periplasm]; glycolate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + lactate [Periplasm] = Proton [Cytoplasm] + lactate [Cytoplasm] Proton [Periplasm] + glycolate [Periplasm] = Proton [Cytoplasm] + glycolate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10508058 [H]