Click here to switch to the map view.

The map label for this gene is 28210610

Identifier: 28210610

GI number: 28210610

Start: 952258

End: 952722

Strand: Direct

Name: 28210610

Synonym: CTC00899

Alternate gene names: NA

Gene position: 952258-952722 (Clockwise)

Preceding gene: 28210609

Following gene: 28210611

Centisome position: 34.02

GC content: 28.39

Gene sequence:

>465_bases
ATGCTTAGGGAAATGAGAAAAAAAGAAAGAAGTATTAATATTTCAGAAGCTATGGAAATGCTAAATGAAGGGCAATATGG
GGTTTTGTCTGTAATAACTAATGAGGGTTATCCCTATGGAGTACCAATTAACTATGTTTATATGGACAATTGCATTTATT
TTCATTGTGCTATAGAAGGATATAAATTAGATAGCATTAAGTTAAATAATAATGTATCCTTTTCTGTAGTTGGTAAAACA
GAGCTCTTACCTAATAAATTTAGCATCAAATATGAAAGTGTAATTATTTTTGGAAAAGCTTTTGAAGTTTTTGATGAAGA
AAAGATTACAGCTTTATCATCTCTTTTAGACAAATATTCAAAAGAATATAAAGAAGCGGGAGCTAAACATGTAAAAGGTT
CTGGTAATAGAACAAAAGTTATTAGAATAGATATAGAACATATTTCAGGTAAGGCAAGAAAATAG

Upstream 100 bases:

>100_bases
GATGAACTAAAAAAATTGGTAGAAAATCCACATATAAAAGTAGCATCTATTGGGGTTATAACAGATAGATATTAGAATAT
AAAATAAGGGGGAGAAATAA

Downstream 100 bases:

>100_bases
AATATAAAGCTAGAATTTTAGTTGCTATAAACTAAAATTCTAGCTTTATTTATAGAAACAATAAAAATGTATTTCTTATT
GTTAGATTTATTGGAGAAGT

Product: 5-nitroimidazole antibiotic resistance protein

Products: NA

Alternate protein names: 5-Nitroimidazole Antibiotic Resistance Protein; 5-Nitroimidazole Resistance Protein NimA; 5-Nitroimidazole Antibiotic Resistance Protein NimB; Antibiotic Resistance Protein; 5-Nitroimidazole Antibiotics Resistance Protein; Nitroimidazole Resistance Protein NimA; Pyridoxamine 5-Phosphate Oxidase Family Protein; Pyridoxamine 5\-Phosphate-Related Protein; Nitroimidazole Resistance-Like Protein; 5-Nitroimidazole Reductase

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MLREMRKKERSINISEAMEMLNEGQYGVLSVITNEGYPYGVPINYVYMDNCIYFHCAIEGYKLDSIKLNNNVSFSVVGKT
ELLPNKFSIKYESVIIFGKAFEVFDEEKITALSSLLDKYSKEYKEAGAKHVKGSGNRTKVIRIDIEHISGKARK

Sequences:

>Translated_154_residues
MLREMRKKERSINISEAMEMLNEGQYGVLSVITNEGYPYGVPINYVYMDNCIYFHCAIEGYKLDSIKLNNNVSFSVVGKT
ELLPNKFSIKYESVIIFGKAFEVFDEEKITALSSLLDKYSKEYKEAGAKHVKGSGNRTKVIRIDIEHISGKARK
>Mature_154_residues
MLREMRKKERSINISEAMEMLNEGQYGVLSVITNEGYPYGVPINYVYMDNCIYFHCAIEGYKLDSIKLNNNVSFSVVGKT
ELLPNKFSIKYESVIIFGKAFEVFDEEKITALSSLLDKYSKEYKEAGAKHVKGSGNRTKVIRIDIEHISGKARK

Specific function: Unknown

COG id: COG3467

COG function: function code R; Predicted flavin-nucleotide-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17577; Mature: 17577

Theoretical pI: Translated: 8.93; Mature: 8.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLREMRKKERSINISEAMEMLNEGQYGVLSVITNEGYPYGVPINYVYMDNCIYFHCAIEG
CCHHHHHHHHCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEEEEECCEEEEEEEECC
YKLDSIKLNNNVSFSVVGKTELLPNKFSIKYESVIIFGKAFEVFDEEKITALSSLLDKYS
EEEEEEEECCCEEEEEEECCCCCCCCEEEEEEEEEEEECCHHHHCHHHHHHHHHHHHHHH
KEYKEAGAKHVKGSGNRTKVIRIDIEHISGKARK
HHHHHCCCCCCCCCCCEEEEEEEEEEECCCCCCC
>Mature Secondary Structure
MLREMRKKERSINISEAMEMLNEGQYGVLSVITNEGYPYGVPINYVYMDNCIYFHCAIEG
CCHHHHHHHHCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEEEEECCEEEEEEEECC
YKLDSIKLNNNVSFSVVGKTELLPNKFSIKYESVIIFGKAFEVFDEEKITALSSLLDKYS
EEEEEEEECCCEEEEEEECCCCCCCCEEEEEEEEEEEECCHHHHCHHHHHHHHHHHHHHH
KEYKEAGAKHVKGSGNRTKVIRIDIEHISGKARK
HHHHHCCCCCCCCCCCEEEEEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA