| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is mglC [H]
Identifier: 28210578
GI number: 28210578
Start: 915473
End: 916483
Strand: Direct
Name: mglC [H]
Synonym: CTC00862
Alternate gene names: 28210578
Gene position: 915473-916483 (Clockwise)
Preceding gene: 28210577
Following gene: 28210579
Centisome position: 32.7
GC content: 31.65
Gene sequence:
>1011_bases ATGTCGGAATTTGTAAACAAGGAGAAAAAAATAAATACAAAAAATATAAAAGAATTTGCAGGTAAGTATGCAATATATTT GGTTCTTTTAGCTTTGTTATTATCCATAGGATTTCTAGATAGTAATTTCCTTTCAAAACGAAATATTATAAATGTATTAA TTATAGCATCTGTACGTGTAATAATAGCACTAGGTGTTGGTGGAGCATTGATTACCAGAGGAACAGATTTATCAGCAGGA CGTGTAGTTGGATTTACTGCATGTATATCGGCTAGTTTATTACAAAGACCAGATTATGCATATAAACTATTTAAAAATGC ACCTCAACTACCTTTAATAATACCTATATTATTAGTAATATTTATAGGGCTTCTTATAGGTGTAATAAATGGATTAGTTG TAGCTTACTTAAAAGTACCTCCTTTTATAGCTACTTTAGGAATGATGGTTATAGTATATGGAGCAGCATGTATATATACT AATGCTCAACCTATAGGAGGTCTAAGAAAAGATTTTTCAGAACTGGGAACAGGGTCAACGCTAGGTATACCTAATTTAAT AATAATTGCTGGACTAGTAATACTTGTAATGTGGTTTATATTAAATAAAACTAAGTTTGGAAAACATATATATGCCATAG GGGGAAATCCAAATGCTGCAGAAGTTTCAGGGGTAAATGTAGATCTTACACTTGTAAAAGTTTATGCATTAGCGGGAGCT TTATATGGATTAGCAGGAGCATTACTAGCTGCAAGAACAGGTGGAGCTACAAATAATTATGGTCTAATGTATGAATTAGA TGCCATAGCTGCGGCTACTATAGGAGGAGTTTCAACTTCAGGTGGAATTGGAACGGTTCAAGGTATAATAACAGGTGTTT TAATATTTGAGGTTTTAAATAATGGATTAGTTATCTTAGGTGTATCTGCATATTGGCAACAAGTTATAAAGGGAATTATA ATCATAGGAGCTGTAGCCTTTGATATTAGAAAATATATTGCTAAAAAATAA
Upstream 100 bases:
>100_bases GATGGAAGATTAAGCGGAATAATAGAGGGTGAAGAAGCTACCCAAGAAGAAATAATGAAATATGCTACTCGATTTATTTA GTATGTAAGGAGGTTTTTAT
Downstream 100 bases:
>100_bases TATTTTCAATAATTTAATAGAATTTGCCATAATGAAGTGATAGAATAAATTAAAGGAATAATTGTAACTAACTAAAGATG CCAAAAGGATGATTTAATGA
Product: beta-methylgalactoside transporter inner membrane component
Products: ADP; phosphate; beta-D-galactose [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 336; Mature: 335
Protein sequence:
>336_residues MSEFVNKEKKINTKNIKEFAGKYAIYLVLLALLLSIGFLDSNFLSKRNIINVLIIASVRVIIALGVGGALITRGTDLSAG RVVGFTACISASLLQRPDYAYKLFKNAPQLPLIIPILLVIFIGLLIGVINGLVVAYLKVPPFIATLGMMVIVYGAACIYT NAQPIGGLRKDFSELGTGSTLGIPNLIIIAGLVILVMWFILNKTKFGKHIYAIGGNPNAAEVSGVNVDLTLVKVYALAGA LYGLAGALLAARTGGATNNYGLMYELDAIAAATIGGVSTSGGIGTVQGIITGVLIFEVLNNGLVILGVSAYWQQVIKGII IIGAVAFDIRKYIAKK
Sequences:
>Translated_336_residues MSEFVNKEKKINTKNIKEFAGKYAIYLVLLALLLSIGFLDSNFLSKRNIINVLIIASVRVIIALGVGGALITRGTDLSAG RVVGFTACISASLLQRPDYAYKLFKNAPQLPLIIPILLVIFIGLLIGVINGLVVAYLKVPPFIATLGMMVIVYGAACIYT NAQPIGGLRKDFSELGTGSTLGIPNLIIIAGLVILVMWFILNKTKFGKHIYAIGGNPNAAEVSGVNVDLTLVKVYALAGA LYGLAGALLAARTGGATNNYGLMYELDAIAAATIGGVSTSGGIGTVQGIITGVLIFEVLNNGLVILGVSAYWQQVIKGII IIGAVAFDIRKYIAKK >Mature_335_residues SEFVNKEKKINTKNIKEFAGKYAIYLVLLALLLSIGFLDSNFLSKRNIINVLIIASVRVIIALGVGGALITRGTDLSAGR VVGFTACISASLLQRPDYAYKLFKNAPQLPLIIPILLVIFIGLLIGVINGLVVAYLKVPPFIATLGMMVIVYGAACIYTN AQPIGGLRKDFSELGTGSTLGIPNLIIIAGLVILVMWFILNKTKFGKHIYAIGGNPNAAEVSGVNVDLTLVKVYALAGAL YGLAGALLAARTGGATNNYGLMYELDAIAAATIGGVSTSGGIGTVQGIITGVLIFEVLNNGLVILGVSAYWQQVIKGIII IGAVAFDIRKYIAKK
Specific function: Part of the binding-protein-dependent transport system for galactoside. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4211
COG function: function code G; ABC-type glucose/galactose transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788471, Length=335, Percent_Identity=51.044776119403, Blast_Score=254, Evalue=8e-69, Organism=Escherichia coli, GI1790191, Length=307, Percent_Identity=37.4592833876222, Blast_Score=177, Evalue=1e-45, Organism=Escherichia coli, GI1790524, Length=323, Percent_Identity=34.3653250773994, Blast_Score=159, Evalue=2e-40, Organism=Escherichia coli, GI1788896, Length=337, Percent_Identity=33.2344213649852, Blast_Score=137, Evalue=1e-33, Organism=Escherichia coli, GI145693152, Length=207, Percent_Identity=36.7149758454106, Blast_Score=127, Evalue=1e-30, Organism=Escherichia coli, GI1789992, Length=395, Percent_Identity=27.8481012658228, Blast_Score=120, Evalue=9e-29, Organism=Escherichia coli, GI1787793, Length=296, Percent_Identity=30.7432432432432, Blast_Score=113, Evalue=1e-26, Organism=Escherichia coli, GI87082395, Length=286, Percent_Identity=32.5174825174825, Blast_Score=105, Evalue=4e-24, Organism=Escherichia coli, GI145693214, Length=266, Percent_Identity=34.5864661654135, Blast_Score=104, Evalue=7e-24, Organism=Escherichia coli, GI1787794, Length=221, Percent_Identity=29.4117647058824, Blast_Score=92, Evalue=6e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001851 [H]
Pfam domain/function: PF02653 BPD_transp_2 [H]
EC number: NA
Molecular weight: Translated: 35402; Mature: 35271
Theoretical pI: Translated: 10.09; Mature: 10.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEFVNKEKKINTKNIKEFAGKYAIYLVLLALLLSIGFLDSNFLSKRNIINVLIIASVRV CCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH IIALGVGGALITRGTDLSAGRVVGFTACISASLLQRPDYAYKLFKNAPQLPLIIPILLVI HHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHH FIGLLIGVINGLVVAYLKVPPFIATLGMMVIVYGAACIYTNAQPIGGLRKDFSELGTGST HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHCCCCC LGIPNLIIIAGLVILVMWFILNKTKFGKHIYAIGGNPNAAEVSGVNVDLTLVKVYALAGA CCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCEECCCCCHHHHHHHHHHHHH LYGLAGALLAARTGGATNNYGLMYELDAIAAATIGGVSTSGGIGTVQGIITGVLIFEVLN HHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH NGLVILGVSAYWQQVIKGIIIIGAVAFDIRKYIAKK CCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SEFVNKEKKINTKNIKEFAGKYAIYLVLLALLLSIGFLDSNFLSKRNIINVLIIASVRV CCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH IIALGVGGALITRGTDLSAGRVVGFTACISASLLQRPDYAYKLFKNAPQLPLIIPILLVI HHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHH FIGLLIGVINGLVVAYLKVPPFIATLGMMVIVYGAACIYTNAQPIGGLRKDFSELGTGST HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHCCCCC LGIPNLIIIAGLVILVMWFILNKTKFGKHIYAIGGNPNAAEVSGVNVDLTLVKVYALAGA CCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCEECCCCCHHHHHHHHHHHHH LYGLAGALLAARTGGATNNYGLMYELDAIAAATIGGVSTSGGIGTVQGIITGVLIFEVLN HHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH NGLVILGVSAYWQQVIKGIIIIGAVAFDIRKYIAKK CCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; beta-D-galactose [Periplasm]; H2O [C]
Specific reaction: ATP + beta-D-galactose [Periplasm] + H2O = ADP + phosphate + beta-D-galactose [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]