Definition Clostridium tetani E88 chromosome, complete genome.
Accession NC_004557
Length 2,799,251

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The map label for this gene is 28210549

Identifier: 28210549

GI number: 28210549

Start: 880851

End: 881933

Strand: Direct

Name: 28210549

Synonym: CTC00832

Alternate gene names: NA

Gene position: 880851-881933 (Clockwise)

Preceding gene: 28210547

Following gene: 28210550

Centisome position: 31.47

GC content: 26.22

Gene sequence:

>1083_bases
ATGGATAAATCTATATGGGTTAGATCTCTAGTAAATAAACAATTTAGCCCTGAAGAATTCTTTAAACATGTAGTTTCTAC
TATAGGTAAAGAATTTAAACTTGAAACTTATGTAAGTATACATACAGAAGCATATAAATTTTTCATGGAAGAGTTTGAAA
TAATAATAAGTAAGAAACAAGTTAAAAGATTTCAAGAATCTGGGTTGTATTTGTTGGACAAGTATATATTAGATGAATTA
GAAGATCAAGGACTTGAATTTAACATAAATAGAAGTAAATACGTAAGATGCTGCTATGGAATCTTTGATGATGATTATAC
TAAAGATAAGATAACTACAAGATTTAATCAAATATTTAATATACCCGTAAAAGAAGGAAGTCTTTTTTATCCTTGCTGCG
GATTAGATACATATGAACCATTAGCACTATTTATGAATAGTATAAATGAGTTTCATTTTGCTCATGGAGAAAGTATAATA
CTACCTACATTAGAATGTGAAGTAAAGAAAGGAACTATGATCAGAAATAAGTCTTATAATAAGAAAAAGAATGAACTTTC
TATAGATACAATTCCATTTGCCATACAGATGGAAAATAAGAAGAATTATGAAATATTAAAGGAATTAGAAGAAGAATATT
TAGATTCTTTTGCATTTATTAAAATAGAAGATATAAGTACTAAAGAGATATGGAAAACTAAGTTTTCTAAAAATCCTAAA
ATAGAAATATATTCTCATAAATTTGAAGGATTTATTTCTTTATATGCAATAGAGAACATAGCTGTATTTTATTATAGAAC
ATATCAAATAGGTGAGGATACATTAGATATGTCTCCATTTAATTGGTTATCTCCAATAGCTTTTAATGCTATATTAGATA
AATTAGTGGATGGTGCTATTTTAATATTAGATGGTGAAGATCCAGAAATAGGGTATGAAGTTCCTTGGAGTGGTTTATGG
AGAGAAAAATATTATAAAGATTTTATATATAGAGAAAAAAGGTTTTCTTATATAGGGGAATTTGGGGAAAGATACGATAA
AATGAAAGTTTGGAAAGTGGATTTCATTAAAAATAAAGCTTGA

Upstream 100 bases:

>100_bases
ATATTCCACAACTAAATTTTTACTTGTAGAATTTGACTTTACTAAGCTATAATATATAATTTAATTAGTATAAAATTATT
TATAAGAAAAGGAGAAATAT

Downstream 100 bases:

>100_bases
AAAAAATATACAAGATGATATAATTAAGAATAATAAGAGTATAAAGAAATTCGTTGATAAGGAAGAGTAGTTAAAATTGA
TTATTTAAAGAGAGTTGAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 360; Mature: 360

Protein sequence:

>360_residues
MDKSIWVRSLVNKQFSPEEFFKHVVSTIGKEFKLETYVSIHTEAYKFFMEEFEIIISKKQVKRFQESGLYLLDKYILDEL
EDQGLEFNINRSKYVRCCYGIFDDDYTKDKITTRFNQIFNIPVKEGSLFYPCCGLDTYEPLALFMNSINEFHFAHGESII
LPTLECEVKKGTMIRNKSYNKKKNELSIDTIPFAIQMENKKNYEILKELEEEYLDSFAFIKIEDISTKEIWKTKFSKNPK
IEIYSHKFEGFISLYAIENIAVFYYRTYQIGEDTLDMSPFNWLSPIAFNAILDKLVDGAILILDGEDPEIGYEVPWSGLW
REKYYKDFIYREKRFSYIGEFGERYDKMKVWKVDFIKNKA

Sequences:

>Translated_360_residues
MDKSIWVRSLVNKQFSPEEFFKHVVSTIGKEFKLETYVSIHTEAYKFFMEEFEIIISKKQVKRFQESGLYLLDKYILDEL
EDQGLEFNINRSKYVRCCYGIFDDDYTKDKITTRFNQIFNIPVKEGSLFYPCCGLDTYEPLALFMNSINEFHFAHGESII
LPTLECEVKKGTMIRNKSYNKKKNELSIDTIPFAIQMENKKNYEILKELEEEYLDSFAFIKIEDISTKEIWKTKFSKNPK
IEIYSHKFEGFISLYAIENIAVFYYRTYQIGEDTLDMSPFNWLSPIAFNAILDKLVDGAILILDGEDPEIGYEVPWSGLW
REKYYKDFIYREKRFSYIGEFGERYDKMKVWKVDFIKNKA
>Mature_360_residues
MDKSIWVRSLVNKQFSPEEFFKHVVSTIGKEFKLETYVSIHTEAYKFFMEEFEIIISKKQVKRFQESGLYLLDKYILDEL
EDQGLEFNINRSKYVRCCYGIFDDDYTKDKITTRFNQIFNIPVKEGSLFYPCCGLDTYEPLALFMNSINEFHFAHGESII
LPTLECEVKKGTMIRNKSYNKKKNELSIDTIPFAIQMENKKNYEILKELEEEYLDSFAFIKIEDISTKEIWKTKFSKNPK
IEIYSHKFEGFISLYAIENIAVFYYRTYQIGEDTLDMSPFNWLSPIAFNAILDKLVDGAILILDGEDPEIGYEVPWSGLW
REKYYKDFIYREKRFSYIGEFGERYDKMKVWKVDFIKNKA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42878; Mature: 42878

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKSIWVRSLVNKQFSPEEFFKHVVSTIGKEFKLETYVSIHTEAYKFFMEEFEIIISKKQ
CCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHH
VKRFQESGLYLLDKYILDELEDQGLEFNINRSKYVRCCYGIFDDDYTKDKITTRFNQIFN
HHHHHHCCCHHHHHHHHHHHHCCCCEEEECHHHEEEEEEECCCCCCCHHHHHHHHHHHEE
IPVKEGSLFYPCCGLDTYEPLALFMNSINEFHFAHGESIILPTLECEVKKGTMIRNKSYN
CEECCCCEEEEECCCCCHHHHHHHHHHHHHHEECCCCEEEEEEEEEEECCCEEEECCCCC
KKKNELSIDTIPFAIQMENKKNYEILKELEEEYLDSFAFIKIEDISTKEIWKTKFSKNPK
CCCCCEEEEEEEEEEEECCCCCHHHHHHHHHHHHCCEEEEEEECCCHHHHHHHHCCCCCC
IEIYSHKFEGFISLYAIENIAVFYYRTYQIGEDTLDMSPFNWLSPIAFNAILDKLVDGAI
EEEEEECCCCEEEEEEECCEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCEE
LILDGEDPEIGYEVPWSGLWREKYYKDFIYREKRFSYIGEFGERYDKMKVWKVDFIKNKA
EEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCC
>Mature Secondary Structure
MDKSIWVRSLVNKQFSPEEFFKHVVSTIGKEFKLETYVSIHTEAYKFFMEEFEIIISKKQ
CCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHH
VKRFQESGLYLLDKYILDELEDQGLEFNINRSKYVRCCYGIFDDDYTKDKITTRFNQIFN
HHHHHHCCCHHHHHHHHHHHHCCCCEEEECHHHEEEEEEECCCCCCCHHHHHHHHHHHEE
IPVKEGSLFYPCCGLDTYEPLALFMNSINEFHFAHGESIILPTLECEVKKGTMIRNKSYN
CEECCCCEEEEECCCCCHHHHHHHHHHHHHHEECCCCEEEEEEEEEEECCCEEEECCCCC
KKKNELSIDTIPFAIQMENKKNYEILKELEEEYLDSFAFIKIEDISTKEIWKTKFSKNPK
CCCCCEEEEEEEEEEEECCCCCHHHHHHHHHHHHCCEEEEEEECCCHHHHHHHHCCCCCC
IEIYSHKFEGFISLYAIENIAVFYYRTYQIGEDTLDMSPFNWLSPIAFNAILDKLVDGAI
EEEEEECCCCEEEEEEECCEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCEE
LILDGEDPEIGYEVPWSGLWREKYYKDFIYREKRFSYIGEFGERYDKMKVWKVDFIKNKA
EEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA