| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is 28210485
Identifier: 28210485
GI number: 28210485
Start: 802597
End: 805125
Strand: Direct
Name: 28210485
Synonym: CTC00766
Alternate gene names: NA
Gene position: 802597-805125 (Clockwise)
Preceding gene: 28210484
Following gene: 28210486
Centisome position: 28.67
GC content: 25.11
Gene sequence:
>2529_bases TTGGGTATTAACATGAATTTTAATACACAAATATTAATTATATTTATTTTTGTAATTCTTTATTTTATATATGAAGCTTT TAAAAATAGAAAACTGTGGAGTAAGAAAAAAACTATATACTGGGGAATTACAAGGATTTTAATAATATTACTGCTATTTC TAAGTGCGATAAACTTTGAATTTAATTTAAAGAACAGGGATATAACTACTATATTTTTAGTGGATAAATCTTTAAGTGCA AATAAATATGAAAAAAAAATTGAGGAATATGTAAATTATCAAATAGATAATAAGAGTAAAAAAGATAAGGTAGCAGTTAT GACTTTTGGGGGAGATATAGCTATAGAATTACCACTTACAAATGAAAAAGAAAAGGTGAAGTTTTCTGCTAATATAAATA AGAATTTTACAGATATAGAAAAGGCAGTGGATTTTTCAATAAACTATTTTCCTAAAAATAATAATAGAAGATTGGTAATT ATAACAGATAAAAAAGAAAACAGTGGGAATATAAAAAAAATCAAAAATAAAATAAAAAAAGAAAATATAAACTTAATAAT AAAAGAAGTAAAAAATAATTTAGAACAAGATGCACAGCTTGAAAAAGTTATAATTCCTAAAAATATATATAAAAGTGGAA ATATAGCTGTAAAAGTCAAGGTATATAGTAATTATAAGGATATTGGGAATTTATATATACATTTAAATAATAAAAAAATA CTGCAAAAAAATGTATCAATTAAAAAAGGAGAAAATGAGTTTGAGTTCAACTTACCTATAAAAGATGAAAATAAAATACT TTTAAAAGCAGAAATTGACTTTCCAAAAGATAAAAATACTTTAAATAATGTATATACTTTAGAAAAAAATCTATCAAAAG ATCCTAAGATACTTTTAATAGGTGATAAAAATGAAGAGTTAGAAAATATATATAGGCTTTTAAAAAATGTGAATATAGAT AGCCAAAAATATTTTTCAAATGAAGTATCTGGAGATGTAAATTTTTTATCTGATTTTAATGAAATTATATTGGTTAATAC AGATTATAAAAATCTCCCTAAAGATTTTGACACTAATTTAGAAAAGGTAGTTAAGGAATTTGGTAGCGGATTAATGGTTA TAGGTGGAGAAAACTCATTTGCATTAGGATCATATGAAAACACTAAATTCGAAGAGTTACTACCAGTTTCTTGTAATGTG AAAAATAAAAGAAAACAAGGTGATGCAGGAATAGTCTTACTCATAGATTGTTCAGGAAGTATGGATGATGAAAGTGGAGG AGTAAAGAAAATAGAACTTGCAAAACAAGGTGCAATAGAGACAATAAAAGCCTTAGAGTCAGAAGATTATATAGGAATAT TAGGATTTTCAGATACTATAGATTGGGTAGTTCCTTTTCAAAAAGCAGAAAATAAGGAAAAGTTAATCAAAGAAGTTGGA AAACTAAAGCCTAAAGGAGGAACTTTAATTATTCCTGGATTAATTGAAGGAGTAAAAACTTTATCAAGTGCAAAAACAAA GGTAAAACATATGATACTTTTAACGGATGGACAAGCAGAAAAAAATGGATTTGATAAATATCTAGAAAATATGAAAAAAA ATAATATGACTTTATCCACGGTAGGTCTAGGAGAAGATAGTGATAGAGAAGTTTTAACTCATTTATCAGATTTCACAGGT GGAAGAAAATATTTTTCTAATGATTTTAAAAGTGTACCTATTATATTTGCAAAAGAAACCCGTATATCTCAAAAAAAATA TATAAATAATGAAGTATTTACTCCAAAAGAAATACAAAATGATTTTAACAAGGAAGGTAATATACTACCACAGTTAAGAG GATATATGGGAACAGGAATAAAACAAGGTGCCAATCTCATATTAGAAAGCCCTAAGGAAGATCCAATACTTGCAACTTGG AACTGTGGCATTGGAAAAGTAGGGGTCTGGACTTCAGACTTAAATGGTAAGTGGTCAGCAGATTGGATATCTTGGCAAGG CTTTGAAAAATATTGGTCATCCATAATTAATAATTTACTAAAAAATAATAAAGGAGAACTAATGGATGTAGAGATTAATA GAACTGGAGGCAATGTTGAAATACTTGGTAATATAAAAAAACATATTAAGAATGGAGATTTAGAATGTATTGCTATAGGA CCTGATAATAAAGAAGAAAAAATAACCATGTTTATAGAAGAAAAAAATAAGTTTAAAGGTAATTTTTCTTTAAACAATGT AGGAAAGTACAAGTTTTTTATAAATTTAAAAGAAGAAGAGCAGATTTTAAATAGAGTAGAGGAAGGCGTTTACCTTGATT ACTCACCTGAACATGCTATAGAAAATAATAATTATAATTTAGATGAAATTTTATTAGAGTATAATGGCAAGTATTTATCT GGAAATGAAAATGTTTTTAACGAAAATATAGTTAATAGAAATATATCCTATATTAATTTAGATTTTATATTATTACCATT AGCATTTTTAATATTTTTAATTGATATATTTTTAAGATTTAACTATTAA
Upstream 100 bases:
>100_bases AATAAGGAAAGTTTTATATCTTATATAAATACAAGTTTAAAGAATATAGCAATAATAATAGTTCTAATATTGTTAATAGT AGAATGGCAGGTGTTTAAGC
Downstream 100 bases:
>100_bases AGGAGGCAACAAGGCATTGGAAAAGAAAAAAAGTTTTAAGGGTATCATAGTCTTTCTTATATTGGCTATTACTCTTGGAG GATTTGGCTATAGAAATAGT
Product: membrane-associated protein
Products: NA
Alternate protein names: Von Willebrand Factor Type A Domain-Containing Protein; Chloride Channel; Mg-Chelatase Subunit Chld; Membrane-Associated Protein; Von Willebrand Factor; Von Willebrand Factor Type A Domain Protein
Number of amino acids: Translated: 842; Mature: 841
Protein sequence:
>842_residues MGINMNFNTQILIIFIFVILYFIYEAFKNRKLWSKKKTIYWGITRILIILLLFLSAINFEFNLKNRDITTIFLVDKSLSA NKYEKKIEEYVNYQIDNKSKKDKVAVMTFGGDIAIELPLTNEKEKVKFSANINKNFTDIEKAVDFSINYFPKNNNRRLVI ITDKKENSGNIKKIKNKIKKENINLIIKEVKNNLEQDAQLEKVIIPKNIYKSGNIAVKVKVYSNYKDIGNLYIHLNNKKI LQKNVSIKKGENEFEFNLPIKDENKILLKAEIDFPKDKNTLNNVYTLEKNLSKDPKILLIGDKNEELENIYRLLKNVNID SQKYFSNEVSGDVNFLSDFNEIILVNTDYKNLPKDFDTNLEKVVKEFGSGLMVIGGENSFALGSYENTKFEELLPVSCNV KNKRKQGDAGIVLLIDCSGSMDDESGGVKKIELAKQGAIETIKALESEDYIGILGFSDTIDWVVPFQKAENKEKLIKEVG KLKPKGGTLIIPGLIEGVKTLSSAKTKVKHMILLTDGQAEKNGFDKYLENMKKNNMTLSTVGLGEDSDREVLTHLSDFTG GRKYFSNDFKSVPIIFAKETRISQKKYINNEVFTPKEIQNDFNKEGNILPQLRGYMGTGIKQGANLILESPKEDPILATW NCGIGKVGVWTSDLNGKWSADWISWQGFEKYWSSIINNLLKNNKGELMDVEINRTGGNVEILGNIKKHIKNGDLECIAIG PDNKEEKITMFIEEKNKFKGNFSLNNVGKYKFFINLKEEEQILNRVEEGVYLDYSPEHAIENNNYNLDEILLEYNGKYLS GNENVFNENIVNRNISYINLDFILLPLAFLIFLIDIFLRFNY
Sequences:
>Translated_842_residues MGINMNFNTQILIIFIFVILYFIYEAFKNRKLWSKKKTIYWGITRILIILLLFLSAINFEFNLKNRDITTIFLVDKSLSA NKYEKKIEEYVNYQIDNKSKKDKVAVMTFGGDIAIELPLTNEKEKVKFSANINKNFTDIEKAVDFSINYFPKNNNRRLVI ITDKKENSGNIKKIKNKIKKENINLIIKEVKNNLEQDAQLEKVIIPKNIYKSGNIAVKVKVYSNYKDIGNLYIHLNNKKI LQKNVSIKKGENEFEFNLPIKDENKILLKAEIDFPKDKNTLNNVYTLEKNLSKDPKILLIGDKNEELENIYRLLKNVNID SQKYFSNEVSGDVNFLSDFNEIILVNTDYKNLPKDFDTNLEKVVKEFGSGLMVIGGENSFALGSYENTKFEELLPVSCNV KNKRKQGDAGIVLLIDCSGSMDDESGGVKKIELAKQGAIETIKALESEDYIGILGFSDTIDWVVPFQKAENKEKLIKEVG KLKPKGGTLIIPGLIEGVKTLSSAKTKVKHMILLTDGQAEKNGFDKYLENMKKNNMTLSTVGLGEDSDREVLTHLSDFTG GRKYFSNDFKSVPIIFAKETRISQKKYINNEVFTPKEIQNDFNKEGNILPQLRGYMGTGIKQGANLILESPKEDPILATW NCGIGKVGVWTSDLNGKWSADWISWQGFEKYWSSIINNLLKNNKGELMDVEINRTGGNVEILGNIKKHIKNGDLECIAIG PDNKEEKITMFIEEKNKFKGNFSLNNVGKYKFFINLKEEEQILNRVEEGVYLDYSPEHAIENNNYNLDEILLEYNGKYLS GNENVFNENIVNRNISYINLDFILLPLAFLIFLIDIFLRFNY >Mature_841_residues GINMNFNTQILIIFIFVILYFIYEAFKNRKLWSKKKTIYWGITRILIILLLFLSAINFEFNLKNRDITTIFLVDKSLSAN KYEKKIEEYVNYQIDNKSKKDKVAVMTFGGDIAIELPLTNEKEKVKFSANINKNFTDIEKAVDFSINYFPKNNNRRLVII TDKKENSGNIKKIKNKIKKENINLIIKEVKNNLEQDAQLEKVIIPKNIYKSGNIAVKVKVYSNYKDIGNLYIHLNNKKIL QKNVSIKKGENEFEFNLPIKDENKILLKAEIDFPKDKNTLNNVYTLEKNLSKDPKILLIGDKNEELENIYRLLKNVNIDS QKYFSNEVSGDVNFLSDFNEIILVNTDYKNLPKDFDTNLEKVVKEFGSGLMVIGGENSFALGSYENTKFEELLPVSCNVK NKRKQGDAGIVLLIDCSGSMDDESGGVKKIELAKQGAIETIKALESEDYIGILGFSDTIDWVVPFQKAENKEKLIKEVGK LKPKGGTLIIPGLIEGVKTLSSAKTKVKHMILLTDGQAEKNGFDKYLENMKKNNMTLSTVGLGEDSDREVLTHLSDFTGG RKYFSNDFKSVPIIFAKETRISQKKYINNEVFTPKEIQNDFNKEGNILPQLRGYMGTGIKQGANLILESPKEDPILATWN CGIGKVGVWTSDLNGKWSADWISWQGFEKYWSSIINNLLKNNKGELMDVEINRTGGNVEILGNIKKHIKNGDLECIAIGP DNKEEKITMFIEEKNKFKGNFSLNNVGKYKFFINLKEEEQILNRVEEGVYLDYSPEHAIENNNYNLDEILLEYNGKYLSG NENVFNENIVNRNISYINLDFILLPLAFLIFLIDIFLRFNY
Specific function: Unknown
COG id: COG2304
COG function: function code R; Uncharacterized protein containing a von Willebrand factor type A (vWA) domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 96466; Mature: 96335
Theoretical pI: Translated: 8.71; Mature: 8.71
Prosite motif: PS50234 VWFA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGINMNFNTQILIIFIFVILYFIYEAFKNRKLWSKKKTIYWGITRILIILLLFLSAINFE CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECHHHHHHHHHHHHHHCCEE FNLKNRDITTIFLVDKSLSANKYEKKIEEYVNYQIDNKSKKDKVAVMTFGGDIAIELPLT EEECCCCEEEEEEEECCCCCHHHHHHHHHHHCEEECCCCCCCEEEEEEECCCEEEEECCC NEKEKVKFSANINKNFTDIEKAVDFSINYFPKNNNRRLVIITDKKENSGNIKKIKNKIKK CCCCEEEEEECCCCCHHHHHHHHCCEEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHH ENINLIIKEVKNNLEQDAQLEKVIIPKNIYKSGNIAVKVKVYSNYKDIGNLYIHLNNKKI CCHHHHHHHHHCCHHHCCCHHEEEECCHHCCCCCEEEEEEEECCCCCCCEEEEEECCCEE LQKNVSIKKGENEFEFNLPIKDENKILLKAEIDFPKDKNTLNNVYTLEKNLSKDPKILLI ECCCCCEECCCCCEEEECCCCCCCEEEEEEECCCCCCCCCCCCEEEEHHCCCCCCCEEEE GDKNEELENIYRLLKNVNIDSQKYFSNEVSGDVNFLSDFNEIILVNTDYKNLPKDFDTNL ECCCHHHHHHHHHHHCCCCCCHHHHCCCCCCCHHHHCCCCCEEEEECCCCCCCCCCCCCH EKVVKEFGSGLMVIGGENSFALGSYENTKFEELLPVSCNVKNKRKQGDAGIVLLIDCSGS HHHHHHHCCCEEEEECCCCEEECCCCCCCHHHEECCCCCCCCCCCCCCCCEEEEEECCCC MDDESGGVKKIELAKQGAIETIKALESEDYIGILGFSDTIDWVVPFQKAENKEKLIKEVG CCCCCCCEEEEEHHHCCHHHHHHHHCCCCCEEEEECCCCCCEEEECHHCCCHHHHHHHHH KLKPKGGTLIIPGLIEGVKTLSSAKTKVKHMILLTDGQAEKNGFDKYLENMKKNNMTLST CCCCCCCEEEECHHHHHHHHHHHHHHEEEEEEEEECCCCCCCHHHHHHHHHHHCCEEEEE VGLGEDSDREVLTHLSDFTGGRKYFSNDFKSVPIIFAKETRISQKKYINNEVFTPKEIQN EECCCCCCHHHHHHHHHCCCCHHHHCCCCCCCCEEEEECCCCHHHHHCCCCCCCHHHHHH DFNKEGNILPQLRGYMGTGIKQGANLILESPKEDPILATWNCGIGKVGVWTSDLNGKWSA HCCCCCCCCHHHHHHHCCCHHHCCCEEEECCCCCCEEEEECCCCCCCEEEECCCCCCCCC DWISWQGFEKYWSSIINNLLKNNKGELMDVEINRTGGNVEILGNIKKHIKNGDLECIAIG CEECCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEECHHHHCCCCCEEEEEEC PDNKEEKITMFIEEKNKFKGNFSLNNVGKYKFFINLKEEEQILNRVEEGVYLDYSPEHAI CCCCCCEEEEEEEECCCCCCCEEECCCCEEEEEEEECHHHHHHHHHHCCEEEECCCCCCC ENNNYNLDEILLEYNGKYLSGNENVFNENIVNRNISYINLDFILLPLAFLIFLIDIFLRF CCCCCCHHHHHEEECCEEECCCCCCCCCHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHC NY CC >Mature Secondary Structure GINMNFNTQILIIFIFVILYFIYEAFKNRKLWSKKKTIYWGITRILIILLLFLSAINFE CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECHHHHHHHHHHHHHHCCEE FNLKNRDITTIFLVDKSLSANKYEKKIEEYVNYQIDNKSKKDKVAVMTFGGDIAIELPLT EEECCCCEEEEEEEECCCCCHHHHHHHHHHHCEEECCCCCCCEEEEEEECCCEEEEECCC NEKEKVKFSANINKNFTDIEKAVDFSINYFPKNNNRRLVIITDKKENSGNIKKIKNKIKK CCCCEEEEEECCCCCHHHHHHHHCCEEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHH ENINLIIKEVKNNLEQDAQLEKVIIPKNIYKSGNIAVKVKVYSNYKDIGNLYIHLNNKKI CCHHHHHHHHHCCHHHCCCHHEEEECCHHCCCCCEEEEEEEECCCCCCCEEEEEECCCEE LQKNVSIKKGENEFEFNLPIKDENKILLKAEIDFPKDKNTLNNVYTLEKNLSKDPKILLI ECCCCCEECCCCCEEEECCCCCCCEEEEEEECCCCCCCCCCCCEEEEHHCCCCCCCEEEE GDKNEELENIYRLLKNVNIDSQKYFSNEVSGDVNFLSDFNEIILVNTDYKNLPKDFDTNL ECCCHHHHHHHHHHHCCCCCCHHHHCCCCCCCHHHHCCCCCEEEEECCCCCCCCCCCCCH EKVVKEFGSGLMVIGGENSFALGSYENTKFEELLPVSCNVKNKRKQGDAGIVLLIDCSGS HHHHHHHCCCEEEEECCCCEEECCCCCCCHHHEECCCCCCCCCCCCCCCCEEEEEECCCC MDDESGGVKKIELAKQGAIETIKALESEDYIGILGFSDTIDWVVPFQKAENKEKLIKEVG CCCCCCCEEEEEHHHCCHHHHHHHHCCCCCEEEEECCCCCCEEEECHHCCCHHHHHHHHH KLKPKGGTLIIPGLIEGVKTLSSAKTKVKHMILLTDGQAEKNGFDKYLENMKKNNMTLST CCCCCCCEEEECHHHHHHHHHHHHHHEEEEEEEEECCCCCCCHHHHHHHHHHHCCEEEEE VGLGEDSDREVLTHLSDFTGGRKYFSNDFKSVPIIFAKETRISQKKYINNEVFTPKEIQN EECCCCCCHHHHHHHHHCCCCHHHHCCCCCCCCEEEEECCCCHHHHHCCCCCCCHHHHHH DFNKEGNILPQLRGYMGTGIKQGANLILESPKEDPILATWNCGIGKVGVWTSDLNGKWSA HCCCCCCCCHHHHHHHCCCHHHCCCEEEECCCCCCEEEEECCCCCCCEEEECCCCCCCCC DWISWQGFEKYWSSIINNLLKNNKGELMDVEINRTGGNVEILGNIKKHIKNGDLECIAIG CEECCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEECHHHHCCCCCEEEEEEC PDNKEEKITMFIEEKNKFKGNFSLNNVGKYKFFINLKEEEQILNRVEEGVYLDYSPEHAI CCCCCCEEEEEEEECCCCCCCEEECCCCEEEEEEEECHHHHHHHHHHCCEEEECCCCCCC ENNNYNLDEILLEYNGKYLSGNENVFNENIVNRNISYINLDFILLPLAFLIFLIDIFLRF CCCCCCHHHHHEEECCEEECCCCCCCCCHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHC NY CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA