| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is 28210471
Identifier: 28210471
GI number: 28210471
Start: 786561
End: 787463
Strand: Direct
Name: 28210471
Synonym: CTC00751
Alternate gene names: NA
Gene position: 786561-787463 (Clockwise)
Preceding gene: 28210470
Following gene: 28210472
Centisome position: 28.1
GC content: 24.03
Gene sequence:
>903_bases ATGTTTACGTACAAAAATAGAAATACTTTTTTGCAAAAACTTCACCCATTAGTAAGTATACTTATAATTTTTACATACAT AATTTCTTTTATAGTTGTTAACAACCCAATTTATTTGTTTATAATACTTTTGAGTTTAATACTTTTATCGTATATTGATG AATCTATAAAAGATTTATTTAAATATGGGAAATTAGTGTTACCCTTTGCAGTACTTGTAGTGATTTTAAATCCGTTATTA GTAAGAAGTGGAAGTACAATACTATATGTAGGAAGAATAAGATTTCCAGTGTTAGGCTCTATAGTAATAACATTAGAAGC TATTATATATGGTATATTTAGTGGAATAAGAATTATATGTATTACTTTAGCCTTTGGCTTTGGAAATTTAATTATACATC CGGATAGAACTTTTGGATTTTTTTCAAGATATTTAAAAAAATCTTCTTTACTTATGAGTATGGTTATAAAAATGTTTCCC AATATGATGAAATCTTATGAAAATATAAGGGATGTAGAAAAGCTTAGGGGAAATATGTTAATTGATAAGAAAATGAAAAA TACTATACAAAATGGTGGAAATATAATTAATATTTTATTTTTATCAAGCCTTGAAGATTCCTTAGATATTGCAGAATCTA TGTATTCAAGGGGATATGGTAGTTTAAAAAAAAGAAGCTCATATTTTGTTGAAAGATTTGAATTAAAAGATAAAATTCTA ATGATAAGTTTAATAATATCATTCATAGGAATAATGGTATTAGCTTATAAAGGAGTATTTTATATGAATTTTTATCCAAG AGTGGACAATCCTTTTAAACTAATATCTATTAAGGGAATAATATTTTGTATTCTATTATTTATTCCTTCAATAATAAATT GGTGGTGGAAAAGTTGGAAATAA
Upstream 100 bases:
>100_bases CTATTAGTTAATAGGTATGTTGTTTTGATAATAAATTTATAATATAATCTAAAGTAGAGAATTATGTGATTATATAAAAA TAGAAAGGCGATTTTAAGAG
Downstream 100 bases:
>100_bases TAAATATAAATAATTTAACATTTAATTATCCTGATAGTAAACAAAGTGCTATAAAGAATATAAATTTAACTGTAAATGAA GGAGAATTTATACTAATAGT
Product: cobalt transport protein
Products: NA
Alternate protein names: Cobalt ABC Transporter Permease; Cobalt Transport Protein Cbiq
Number of amino acids: Translated: 300; Mature: 300
Protein sequence:
>300_residues MFTYKNRNTFLQKLHPLVSILIIFTYIISFIVVNNPIYLFIILLSLILLSYIDESIKDLFKYGKLVLPFAVLVVILNPLL VRSGSTILYVGRIRFPVLGSIVITLEAIIYGIFSGIRIICITLAFGFGNLIIHPDRTFGFFSRYLKKSSLLMSMVIKMFP NMMKSYENIRDVEKLRGNMLIDKKMKNTIQNGGNIINILFLSSLEDSLDIAESMYSRGYGSLKKRSSYFVERFELKDKIL MISLIISFIGIMVLAYKGVFYMNFYPRVDNPFKLISIKGIIFCILLFIPSIINWWWKSWK
Sequences:
>Translated_300_residues MFTYKNRNTFLQKLHPLVSILIIFTYIISFIVVNNPIYLFIILLSLILLSYIDESIKDLFKYGKLVLPFAVLVVILNPLL VRSGSTILYVGRIRFPVLGSIVITLEAIIYGIFSGIRIICITLAFGFGNLIIHPDRTFGFFSRYLKKSSLLMSMVIKMFP NMMKSYENIRDVEKLRGNMLIDKKMKNTIQNGGNIINILFLSSLEDSLDIAESMYSRGYGSLKKRSSYFVERFELKDKIL MISLIISFIGIMVLAYKGVFYMNFYPRVDNPFKLISIKGIIFCILLFIPSIINWWWKSWK >Mature_300_residues MFTYKNRNTFLQKLHPLVSILIIFTYIISFIVVNNPIYLFIILLSLILLSYIDESIKDLFKYGKLVLPFAVLVVILNPLL VRSGSTILYVGRIRFPVLGSIVITLEAIIYGIFSGIRIICITLAFGFGNLIIHPDRTFGFFSRYLKKSSLLMSMVIKMFP NMMKSYENIRDVEKLRGNMLIDKKMKNTIQNGGNIINILFLSSLEDSLDIAESMYSRGYGSLKKRSSYFVERFELKDKIL MISLIISFIGIMVLAYKGVFYMNFYPRVDNPFKLISIKGIIFCILLFIPSIINWWWKSWK
Specific function: Unknown
COG id: COG0619
COG function: function code P; ABC-type cobalt transport system, permease component CbiQ and related transporters
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34786; Mature: 34786
Theoretical pI: Translated: 10.33; Mature: 10.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFTYKNRNTFLQKLHPLVSILIIFTYIISFIVVNNPIYLFIILLSLILLSYIDESIKDLF CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH KYGKLVLPFAVLVVILNPLLVRSGSTILYVGRIRFPVLGSIVITLEAIIYGIFSGIRIIC HHCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ITLAFGFGNLIIHPDRTFGFFSRYLKKSSLLMSMVIKMFPNMMKSYENIRDVEKLRGNML HHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC IDKKMKNTIQNGGNIINILFLSSLEDSLDIAESMYSRGYGSLKKRSSYFVERFELKDKIL HHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH MISLIISFIGIMVLAYKGVFYMNFYPRVDNPFKLISIKGIIFCILLFIPSIINWWWKSWK HHHHHHHHHHHHHHHHCCHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MFTYKNRNTFLQKLHPLVSILIIFTYIISFIVVNNPIYLFIILLSLILLSYIDESIKDLF CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH KYGKLVLPFAVLVVILNPLLVRSGSTILYVGRIRFPVLGSIVITLEAIIYGIFSGIRIIC HHCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ITLAFGFGNLIIHPDRTFGFFSRYLKKSSLLMSMVIKMFPNMMKSYENIRDVEKLRGNML HHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC IDKKMKNTIQNGGNIINILFLSSLEDSLDIAESMYSRGYGSLKKRSSYFVERFELKDKIL HHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH MISLIISFIGIMVLAYKGVFYMNFYPRVDNPFKLISIKGIIFCILLFIPSIINWWWKSWK HHHHHHHHHHHHHHHHCCHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA