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The map label for this gene is ydiF [H]

Identifier: 28210430

GI number: 28210430

Start: 730766

End: 732340

Strand: Direct

Name: ydiF [H]

Synonym: CTC00708

Alternate gene names: 28210430

Gene position: 730766-732340 (Clockwise)

Preceding gene: 28210429

Following gene: 28210431

Centisome position: 26.11

GC content: 32.7

Gene sequence:

>1575_bases
ATGAGTTTAAAAGTTAAAACAGTTGAAGAAGCTATTTCAATGATTAAAAACGAAGATGTTGTTGCTGTTGGAGGATTTGT
TGGATCTTTGCATCCGGAAGAACTTACTAGTGAATTAGAAAGAAATTTTTTAGAAAAAGGATCACCTAACAAATTAACAC
TAATTTATGCAGCAGGACAAGGAGATTCAAAAGAAAAAGGGTTAAATCATTTAGGATATGAGGGATTAGTAAGAAGAGTG
ATTGGAGGACATTGGGGATTAGTTCCTAAACTTCAAAAGTTAGCTGTTGAAAATAAGATAGAAGCTTATAATTTACCACA
GGGAGTTATAACTCATCTATTTAGGGATATAGCAGCAGGAAAGGTTGGAACTATAACCCATGTAGGATTAAAAACTTTTG
TAGATCCAAGACTTGAAGGTGGAAAGTTAAATGAAAAAACTAAGGAAGACATAGTTAAGGTAATAGCAATAGAAGGACAA
GAAAAACTTCTATATAAATCAATGCCTATTAATATTGCACTTTTAAAGGGAACCTATGCTGATGAAAAAGGTAATGTTTC
TTTAGAAAAGGAAGCAGTGACTTTAGAAGTGCTGTCCATTGCTCAAGCTGTAAAAAATTCAGGAGGAAAGGTAATTGTAC
AAGTTGAAAAGGTTGTAGAGAATGGAACCTTAGATCCTAAATTAGTAAAAATACCTAGTATATATGTAGATGCTGTTGTA
GTAGGAAGGGAAGAAAATAATTTTCAGACTTTCTCAGAAAAATATAATCCATCCTATAGTGGACAAGTGAAGATTCCTCT
AAGTGATATAAAATCCCTTCCTTTAGATGAAAGAAAAATAATATCTAGAAGAGCAGTTAAAGAACTTGAAAAAGACTCTA
TAGTAAATTTAGGAATAGGAATTCCAGAAGGGGTGTCTATTGTAGCAAATGAAGAAGGAATAGGAGATAGCTTAACCTTA
ACTGTAGAGGCGGGGCCAGTTGGAGGGATTCCCGCAGGAGGACTAAGTTTTGGGGCCTCAACAAATGTAGAGGCAATACT
AGATCAAGGATATCAATTTGATTTTTATGATGGCGGTGGATTGGATTCAGCATTTTTAGGGTTAGCTCAATGTGATAAAT
ATGGGAATATAAATGTAAGTAAATTTGGCACTGTAATTCCGGGTTGTGGTGGATTTATAAATATATCTCAGAATTCAAAA
AATATGATATTCTGTGGTACTTTCACAGCGGGAGGATTAAGAGTAAAAGTAGAGGATGGAAAATTAATTATAGAAAAAGA
GGGAAAGGTTAAAAAATTCCTTAAACATGTAGAGCAAATCACATTTAGTGGAGAGTATGCTAATGAAATTGGACAATCTG
TCTTGTATATAACAGAAAGAGCGGTATTTAAATTAGAAAATAGAGGGCTTGTATTAAAGGAAATTGCTCCAGGAATTAGT
TTGGAAAAAGATGTATTAGAACAAATGGAGTTTAAACCAATTATTGATGAGGATTTAAAGTTAATGGATGAAAAAATTTT
TTTAGATAAATTAATGGGAATTAATAAAAATAATGGAGTTGAAGAGGTGAGCTAA

Upstream 100 bases:

>100_bases
TTCATCCCGCAATAAATAATTAATAAAATAAAGAATATTATGTTGGCATAATAATTGCTTTTAAATATATTGTAAATGTT
TTAAGGGGAGGAATTTATAT

Downstream 100 bases:

>100_bases
ATGTTAGGAGTAATAGGAATTATATTATCACTAGTTTTACTTATGTACTTAGCATATAGGGGAATAACCGTACTAATTCT
GGCACCGATATTATCATTAT

Product: acetoacetyl-COA transferase subunit alpha

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 524; Mature: 523

Protein sequence:

>524_residues
MSLKVKTVEEAISMIKNEDVVAVGGFVGSLHPEELTSELERNFLEKGSPNKLTLIYAAGQGDSKEKGLNHLGYEGLVRRV
IGGHWGLVPKLQKLAVENKIEAYNLPQGVITHLFRDIAAGKVGTITHVGLKTFVDPRLEGGKLNEKTKEDIVKVIAIEGQ
EKLLYKSMPINIALLKGTYADEKGNVSLEKEAVTLEVLSIAQAVKNSGGKVIVQVEKVVENGTLDPKLVKIPSIYVDAVV
VGREENNFQTFSEKYNPSYSGQVKIPLSDIKSLPLDERKIISRRAVKELEKDSIVNLGIGIPEGVSIVANEEGIGDSLTL
TVEAGPVGGIPAGGLSFGASTNVEAILDQGYQFDFYDGGGLDSAFLGLAQCDKYGNINVSKFGTVIPGCGGFINISQNSK
NMIFCGTFTAGGLRVKVEDGKLIIEKEGKVKKFLKHVEQITFSGEYANEIGQSVLYITERAVFKLENRGLVLKEIAPGIS
LEKDVLEQMEFKPIIDEDLKLMDEKIFLDKLMGINKNNGVEEVS

Sequences:

>Translated_524_residues
MSLKVKTVEEAISMIKNEDVVAVGGFVGSLHPEELTSELERNFLEKGSPNKLTLIYAAGQGDSKEKGLNHLGYEGLVRRV
IGGHWGLVPKLQKLAVENKIEAYNLPQGVITHLFRDIAAGKVGTITHVGLKTFVDPRLEGGKLNEKTKEDIVKVIAIEGQ
EKLLYKSMPINIALLKGTYADEKGNVSLEKEAVTLEVLSIAQAVKNSGGKVIVQVEKVVENGTLDPKLVKIPSIYVDAVV
VGREENNFQTFSEKYNPSYSGQVKIPLSDIKSLPLDERKIISRRAVKELEKDSIVNLGIGIPEGVSIVANEEGIGDSLTL
TVEAGPVGGIPAGGLSFGASTNVEAILDQGYQFDFYDGGGLDSAFLGLAQCDKYGNINVSKFGTVIPGCGGFINISQNSK
NMIFCGTFTAGGLRVKVEDGKLIIEKEGKVKKFLKHVEQITFSGEYANEIGQSVLYITERAVFKLENRGLVLKEIAPGIS
LEKDVLEQMEFKPIIDEDLKLMDEKIFLDKLMGINKNNGVEEVS
>Mature_523_residues
SLKVKTVEEAISMIKNEDVVAVGGFVGSLHPEELTSELERNFLEKGSPNKLTLIYAAGQGDSKEKGLNHLGYEGLVRRVI
GGHWGLVPKLQKLAVENKIEAYNLPQGVITHLFRDIAAGKVGTITHVGLKTFVDPRLEGGKLNEKTKEDIVKVIAIEGQE
KLLYKSMPINIALLKGTYADEKGNVSLEKEAVTLEVLSIAQAVKNSGGKVIVQVEKVVENGTLDPKLVKIPSIYVDAVVV
GREENNFQTFSEKYNPSYSGQVKIPLSDIKSLPLDERKIISRRAVKELEKDSIVNLGIGIPEGVSIVANEEGIGDSLTLT
VEAGPVGGIPAGGLSFGASTNVEAILDQGYQFDFYDGGGLDSAFLGLAQCDKYGNINVSKFGTVIPGCGGFINISQNSKN
MIFCGTFTAGGLRVKVEDGKLIIEKEGKVKKFLKHVEQITFSGEYANEIGQSVLYITERAVFKLENRGLVLKEIAPGISL
EKDVLEQMEFKPIIDEDLKLMDEKIFLDKLMGINKNNGVEEVS

Specific function: Unknown

COG id: COG4670

COG function: function code I; Acyl CoA:acetate/3-ketoacid CoA transferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae AtoD [H]

Homologues:

Organism=Homo sapiens, GI4557817, Length=500, Percent_Identity=25, Blast_Score=84, Evalue=3e-16,
Organism=Escherichia coli, GI1787985, Length=513, Percent_Identity=46.3937621832359, Blast_Score=468, Evalue=1e-133,
Organism=Escherichia coli, GI1788551, Length=244, Percent_Identity=27.4590163934426, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1788552, Length=220, Percent_Identity=29.0909090909091, Blast_Score=68, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17531517, Length=529, Percent_Identity=25.7088846880907, Blast_Score=84, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014388
- InterPro:   IPR004165 [H]

Pfam domain/function: PF01144 CoA_trans [H]

EC number: NA

Molecular weight: Translated: 56895; Mature: 56764

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLKVKTVEEAISMIKNEDVVAVGGFVGSLHPEELTSELERNFLEKGSPNKLTLIYAAGQ
CCEEEHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECC
GDSKEKGLNHLGYEGLVRRVIGGHWGLVPKLQKLAVENKIEAYNLPQGVITHLFRDIAAG
CCCHHHCCHHCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCC
KVGTITHVGLKTFVDPRLEGGKLNEKTKEDIVKVIAIEGQEKLLYKSMPINIALLKGTYA
CCCEEEEHHHHHHCCCCCCCCCCCCHHHHHHEEEEEECCCHHEEEECCCEEEEEEECCCC
DEKGNVSLEKEAVTLEVLSIAQAVKNSGGKVIVQVEKVVENGTLDPKLVKIPSIYVDAVV
CCCCCEEEEHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHCCCCCCEEEECCCEEEEEEE
VGREENNFQTFSEKYNPSYSGQVKIPLSDIKSLPLDERKIISRRAVKELEKDSIVNLGIG
EECCCCCCHHHHHHCCCCCCCEEEEEHHHHHCCCCCHHHHHHHHHHHHHHHCCEEEECCC
IPEGVSIVANEEGIGDSLTLTVEAGPVGGIPAGGLSFGASTNVEAILDQGYQFDFYDGGG
CCCCCEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHCCCCEEEECCCCC
LDSAFLGLAQCDKYGNINVSKFGTVIPGCGGFINISQNSKNMIFCGTFTAGGLRVKVEDG
CCHHHHHHHHHCCCCCCCHHHCCCCCCCCCCEEEECCCCCCEEEEEEECCCCEEEEEECC
KLIIEKEGKVKKFLKHVEQITFSGEYANEIGQSVLYITERAVFKLENRGLVLKEIAPGIS
EEEEECCCHHHHHHHHHHHHCCCCHHHHHHCCCEEEEEHHHEEEECCCCEEHHHHCCCCC
LEKDVLEQMEFKPIIDEDLKLMDEKIFLDKLMGINKNNGVEEVS
CCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
SLKVKTVEEAISMIKNEDVVAVGGFVGSLHPEELTSELERNFLEKGSPNKLTLIYAAGQ
CEEEHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECC
GDSKEKGLNHLGYEGLVRRVIGGHWGLVPKLQKLAVENKIEAYNLPQGVITHLFRDIAAG
CCCHHHCCHHCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCC
KVGTITHVGLKTFVDPRLEGGKLNEKTKEDIVKVIAIEGQEKLLYKSMPINIALLKGTYA
CCCEEEEHHHHHHCCCCCCCCCCCCHHHHHHEEEEEECCCHHEEEECCCEEEEEEECCCC
DEKGNVSLEKEAVTLEVLSIAQAVKNSGGKVIVQVEKVVENGTLDPKLVKIPSIYVDAVV
CCCCCEEEEHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHCCCCCCEEEECCCEEEEEEE
VGREENNFQTFSEKYNPSYSGQVKIPLSDIKSLPLDERKIISRRAVKELEKDSIVNLGIG
EECCCCCCHHHHHHCCCCCCCEEEEEHHHHHCCCCCHHHHHHHHHHHHHHHCCEEEECCC
IPEGVSIVANEEGIGDSLTLTVEAGPVGGIPAGGLSFGASTNVEAILDQGYQFDFYDGGG
CCCCCEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHCCCCEEEECCCCC
LDSAFLGLAQCDKYGNINVSKFGTVIPGCGGFINISQNSKNMIFCGTFTAGGLRVKVEDG
CCHHHHHHHHHCCCCCCCHHHCCCCCCCCCCEEEECCCCCCEEEEEEECCCCEEEEEECC
KLIIEKEGKVKKFLKHVEQITFSGEYANEIGQSVLYITERAVFKLENRGLVLKEIAPGIS
EEEEECCCHHHHHHHHHHHHCCCCHHHHHHCCCEEEEEHHHEEEECCCCEEHHHHCCCCC
LEKDVLEQMEFKPIIDEDLKLMDEKIFLDKLMGINKNNGVEEVS
CCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503; 3541912; 7984428 [H]