Definition Clostridium tetani E88 chromosome, complete genome.
Accession NC_004557
Length 2,799,251

Click here to switch to the map view.

The map label for this gene is 28210291

Identifier: 28210291

GI number: 28210291

Start: 572773

End: 573228

Strand: Direct

Name: 28210291

Synonym: CTC00552

Alternate gene names: NA

Gene position: 572773-573228 (Clockwise)

Preceding gene: 28210290

Following gene: 28210292

Centisome position: 20.46

GC content: 21.71

Gene sequence:

>456_bases
ATGAATAATGATACCAGTAATTTTAAAATAAATAAATATTATTTAGAAAAGAAAAAAGAAAAAATACAGAACTTAGATAA
AAAAAATAAAAAATATAGTAAAGACATATATGAGATGAAAGAAAAAATAAAATCAAAGAGAGAAGAAGTCGATAAACTAA
AAGAGGAATATAGTGAATATAAAGAAAAATATGATAGATTTATCAATATATTTAACGAAAGAGGAATAACTATAAACATA
ATAAATAAAGATTATGATTTAAGGGAGTGGGACAATCTTTATTTTAAAAAACAAGGAGATATAGGGGTTATTACTTCAAA
AGATGGTAATATAGTTAAGAGCTTTGATAAAGATGTTACTGATGTTTTAGAAGAAATATTACATGATAAAAAATCTAGTA
TTGTAATAACCAGGGTAACAACTAATCTTATAAAAGCTCAACTACAAATAAGATAA

Upstream 100 bases:

>100_bases
TTTGATAAAATTAAGATAAATCTATTAATAAAATCTAATATTTTTTTCAATATTAACACCTCTTTTGTTCTAGAATATAA
TGGAATAAGGATGTGTATTC

Downstream 100 bases:

>100_bases
GTTTTAAAATAAGAAAATTTTAATAAAAATGAAGCGAAATTGCAATGTATTTCGTTTTATTTATAGGGGAGGAGGAAAAT
ATCCCTTCGGATATTTATGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MNNDTSNFKINKYYLEKKKEKIQNLDKKNKKYSKDIYEMKEKIKSKREEVDKLKEEYSEYKEKYDRFINIFNERGITINI
INKDYDLREWDNLYFKKQGDIGVITSKDGNIVKSFDKDVTDVLEEILHDKKSSIVITRVTTNLIKAQLQIR

Sequences:

>Translated_151_residues
MNNDTSNFKINKYYLEKKKEKIQNLDKKNKKYSKDIYEMKEKIKSKREEVDKLKEEYSEYKEKYDRFINIFNERGITINI
INKDYDLREWDNLYFKKQGDIGVITSKDGNIVKSFDKDVTDVLEEILHDKKSSIVITRVTTNLIKAQLQIR
>Mature_151_residues
MNNDTSNFKINKYYLEKKKEKIQNLDKKNKKYSKDIYEMKEKIKSKREEVDKLKEEYSEYKEKYDRFINIFNERGITINI
INKDYDLREWDNLYFKKQGDIGVITSKDGNIVKSFDKDVTDVLEEILHDKKSSIVITRVTTNLIKAQLQIR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18202; Mature: 18202

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNDTSNFKINKYYLEKKKEKIQNLDKKNKKYSKDIYEMKEKIKSKREEVDKLKEEYSEY
CCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KEKYDRFINIFNERGITINIINKDYDLREWDNLYFKKQGDIGVITSKDGNIVKSFDKDVT
HHHHHHHHHHHHCCCCEEEEECCCCCCHHHHCHHEEECCCEEEEECCCCCHHHHHHHHHH
DVLEEILHDKKSSIVITRVTTNLIKAQLQIR
HHHHHHHCCCCCCEEEEHHHHHHHHHHHCCC
>Mature Secondary Structure
MNNDTSNFKINKYYLEKKKEKIQNLDKKNKKYSKDIYEMKEKIKSKREEVDKLKEEYSEY
CCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KEKYDRFINIFNERGITINIINKDYDLREWDNLYFKKQGDIGVITSKDGNIVKSFDKDVT
HHHHHHHHHHHHCCCCEEEEECCCCCCHHHHCHHEEECCCEEEEECCCCCHHHHHHHHHH
DVLEEILHDKKSSIVITRVTTNLIKAQLQIR
HHHHHHHCCCCCCEEEEHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA