Click here to switch to the map view.

The map label for this gene is 28210287

Identifier: 28210287

GI number: 28210287

Start: 564030

End: 564518

Strand: Direct

Name: 28210287

Synonym: CTC00548

Alternate gene names: NA

Gene position: 564030-564518 (Clockwise)

Preceding gene: 28210286

Following gene: 28210290

Centisome position: 20.15

GC content: 31.08

Gene sequence:

>489_bases
ATGGATGATATAAATATTTATAAAGGAAATATAGAAGTTGATAACTTTTCTGTTGCTGAAGAATTTAATTTAAGTAGCTT
TTGTGAAAATGATTCAATGACACAATCTGTTCATTTTAGTCCTTGTGAATTGTGTAAAAGTACTAGTTTAGACCCTATGG
ATATTAGTAAATCAGAAACTAGGTTACTAAGGACAAGAGTAGTATTAAGAAATGTATGCTATGGTAGAGAAATAACTGTA
GGATGTATAGTTATGAATAGATCTGGCCAAGTTTTAGCTTTTAAAGCAGACACATTTATTGCAAGTAGAAATCAATATAC
ATCTAATGTAGATGATGATTTAGTATATGATAAAGGTTGTTGTGGACATGGAAACAGTTGCGGAACAGTGCGCAGATCAT
TTGACTTTTTATTACCACAACATGATTTATGCGAGGCATTAGATTTAAGAGTTAGAGTTGTAGCAAACTACACTTCACCT
TGTAGCTAA

Upstream 100 bases:

>100_bases
GAAATTAGTTGGGAATAATGTAAACAAATTAGGATAAACGTCATATACTGTATCATAGGTATTAAAAATACTAACTAATA
TTATTGGTGGTGAGATATAT

Downstream 100 bases:

>100_bases
TAGATTTTTTAAAAAGAAGCCCTATGTGAATGCATAGGGTTTCTTCTATATATTGTTTTTCAAGTTAAAAGTAGAAGTAT
TCACATAAACTTTATCTGGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MDDINIYKGNIEVDNFSVAEEFNLSSFCENDSMTQSVHFSPCELCKSTSLDPMDISKSETRLLRTRVVLRNVCYGREITV
GCIVMNRSGQVLAFKADTFIASRNQYTSNVDDDLVYDKGCCGHGNSCGTVRRSFDFLLPQHDLCEALDLRVRVVANYTSP
CS

Sequences:

>Translated_162_residues
MDDINIYKGNIEVDNFSVAEEFNLSSFCENDSMTQSVHFSPCELCKSTSLDPMDISKSETRLLRTRVVLRNVCYGREITV
GCIVMNRSGQVLAFKADTFIASRNQYTSNVDDDLVYDKGCCGHGNSCGTVRRSFDFLLPQHDLCEALDLRVRVVANYTSP
CS
>Mature_162_residues
MDDINIYKGNIEVDNFSVAEEFNLSSFCENDSMTQSVHFSPCELCKSTSLDPMDISKSETRLLRTRVVLRNVCYGREITV
GCIVMNRSGQVLAFKADTFIASRNQYTSNVDDDLVYDKGCCGHGNSCGTVRRSFDFLLPQHDLCEALDLRVRVVANYTSP
CS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18162; Mature: 18162

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
8.6 %Cys+Met (Translated Protein)
6.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
8.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDINIYKGNIEVDNFSVAEEFNLSSFCENDSMTQSVHFSPCELCKSTSLDPMDISKSET
CCCCEEEECCEEECCCCCHHHCCCHHHCCCCCCCCEECCCHHHHHHCCCCCCCCCCHHHH
RLLRTRVVLRNVCYGREITVGCIVMNRSGQVLAFKADTFIASRNQYTSNVDDDLVYDKGC
HHHHHHHHHHHHCCCCEEEEEEEEECCCCCEEEEECCEEEECCCCCCCCCCCCEEECCCC
CGHGNSCGTVRRSFDFLLPQHDLCEALDLRVRVVANYTSPCS
CCCCCCCCHHHHHHHHCCCCHHHHHHHCCEEEEEEECCCCCC
>Mature Secondary Structure
MDDINIYKGNIEVDNFSVAEEFNLSSFCENDSMTQSVHFSPCELCKSTSLDPMDISKSET
CCCCEEEECCEEECCCCCHHHCCCHHHCCCCCCCCEECCCHHHHHHCCCCCCCCCCHHHH
RLLRTRVVLRNVCYGREITVGCIVMNRSGQVLAFKADTFIASRNQYTSNVDDDLVYDKGC
HHHHHHHHHHHHCCCCEEEEEEEEECCCCCEEEEECCEEEECCCCCCCCCCCCEEECCCC
CGHGNSCGTVRRSFDFLLPQHDLCEALDLRVRVVANYTSPCS
CCCCCCCCHHHHHHHHCCCCHHHHHHHCCEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA