Definition Clostridium tetani E88 chromosome, complete genome.
Accession NC_004557
Length 2,799,251

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The map label for this gene is 28210265

Identifier: 28210265

GI number: 28210265

Start: 536938

End: 537777

Strand: Direct

Name: 28210265

Synonym: CTC00525

Alternate gene names: NA

Gene position: 536938-537777 (Clockwise)

Preceding gene: 28210264

Following gene: 28210266

Centisome position: 19.18

GC content: 29.17

Gene sequence:

>840_bases
ATGAAAGACAGAGAAAGTAGGGACAGTTCGCAAAAATATATAGATGTAGAACTCTATTTAGATGAAGATTCCAAAAGAAA
AATTTCTGATGTGCAAAAGGAGTACTTGGAAGAAGAACTAAGAGAAGTTATTCCTAAGGTAGAGGAAGGAAAAATAAATA
TAGCTGGAATATATGCATTTGATCAAGGAGATAAAGTTGAAGTTAAAGCATATTTAGCAAATGGTTTAAGTCAAAAAATT
AATTTTGAAGATGTTCCAATATACATCATAAATTCGAAAGAAGAAAAATTAGCATATCAAGTATTTGACCTTTCAGAAGA
AGGTGATATACCATCAGGCAAGGCTATACCTGTAAAACTTAATTTTAATAAACAAAATATACTTGTGGATAAGATACCAC
AGGATGATTGGAAGGTAGTTTTTGGAGGTAATGATGTTAAAGGAGTTAGATATGTAAATATAGAATTAGAATCTATACCA
GAAGGAATAGAAGAAAGTGAAATAAAAGTATTTAAAGAGTTTTTGGAATCTTTACCTAAGCTTGAAAGAGGACAAGGGAG
TATTTCAGTATTTACAATTACTCAATATGAAAATGGAGACTTACTTATGACTTTACTTGTGAGAAATGCTACAGATGAAG
CAGTAACTATGACAAAAATGCCTATAACTCTAAAAACCCAAAAAGGAGAAACAATTTTATCAGGAGTATTTGATATAGAA
AACTTTACGGTAAATCCTTATAAAGCTAGAGTTTTAAGTCTAATTTTCAAAAAAGAAGTTGTTAATATAGAAGAAGACTT
TGACTTAAGTACTTGTAAGATTATATTCGAAAGAGAATAA

Upstream 100 bases:

>100_bases
AAATTTTAATTGCATAAAATTTTTCTGAACTAAGAGAAGAAAAATCTACTTAACTATTCACTAAAATAAATGGTTTTATT
TACAGAATTGGAGGATATAT

Downstream 100 bases:

>100_bases
AATATTAAGGAATACTAAGGGACAGGTCACAAGAGAACTTCAAAAAATTATAAGAATTTAAGAAGTTCTCTTTATTTTTA
TGGGAATTTAAAGCAACAGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MKDRESRDSSQKYIDVELYLDEDSKRKISDVQKEYLEEELREVIPKVEEGKINIAGIYAFDQGDKVEVKAYLANGLSQKI
NFEDVPIYIINSKEEKLAYQVFDLSEEGDIPSGKAIPVKLNFNKQNILVDKIPQDDWKVVFGGNDVKGVRYVNIELESIP
EGIEESEIKVFKEFLESLPKLERGQGSISVFTITQYENGDLLMTLLVRNATDEAVTMTKMPITLKTQKGETILSGVFDIE
NFTVNPYKARVLSLIFKKEVVNIEEDFDLSTCKIIFERE

Sequences:

>Translated_279_residues
MKDRESRDSSQKYIDVELYLDEDSKRKISDVQKEYLEEELREVIPKVEEGKINIAGIYAFDQGDKVEVKAYLANGLSQKI
NFEDVPIYIINSKEEKLAYQVFDLSEEGDIPSGKAIPVKLNFNKQNILVDKIPQDDWKVVFGGNDVKGVRYVNIELESIP
EGIEESEIKVFKEFLESLPKLERGQGSISVFTITQYENGDLLMTLLVRNATDEAVTMTKMPITLKTQKGETILSGVFDIE
NFTVNPYKARVLSLIFKKEVVNIEEDFDLSTCKIIFERE
>Mature_279_residues
MKDRESRDSSQKYIDVELYLDEDSKRKISDVQKEYLEEELREVIPKVEEGKINIAGIYAFDQGDKVEVKAYLANGLSQKI
NFEDVPIYIINSKEEKLAYQVFDLSEEGDIPSGKAIPVKLNFNKQNILVDKIPQDDWKVVFGGNDVKGVRYVNIELESIP
EGIEESEIKVFKEFLESLPKLERGQGSISVFTITQYENGDLLMTLLVRNATDEAVTMTKMPITLKTQKGETILSGVFDIE
NFTVNPYKARVLSLIFKKEVVNIEEDFDLSTCKIIFERE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31942; Mature: 31942

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDRESRDSSQKYIDVELYLDEDSKRKISDVQKEYLEEELREVIPKVEEGKINIAGIYAF
CCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEE
DQGDKVEVKAYLANGLSQKINFEDVPIYIINSKEEKLAYQVFDLSEEGDIPSGKAIPVKL
CCCCEEEEEEEECCCCCCCCCCCCCCEEEECCCCCEEEEEEEECCCCCCCCCCCEEEEEE
NFNKQNILVDKIPQDDWKVVFGGNDVKGVRYVNIELESIPEGIEESEIKVFKEFLESLPK
ECCCCEEEEECCCCCCCEEEECCCCCCCEEEEEEEHHHCCCCCCHHHHHHHHHHHHHCCH
LERGQGSISVFTITQYENGDLLMTLLVRNATDEAVTMTKMPITLKTQKGETILSGVFDIE
HHCCCCCEEEEEEEEECCCCEEEEEEECCCCCCEEEEEECCEEEEECCCCEEEHEEEECC
NFTVNPYKARVLSLIFKKEVVNIEEDFDLSTCKIIFERE
CEEECHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECC
>Mature Secondary Structure
MKDRESRDSSQKYIDVELYLDEDSKRKISDVQKEYLEEELREVIPKVEEGKINIAGIYAF
CCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEE
DQGDKVEVKAYLANGLSQKINFEDVPIYIINSKEEKLAYQVFDLSEEGDIPSGKAIPVKL
CCCCEEEEEEEECCCCCCCCCCCCCCEEEECCCCCEEEEEEEECCCCCCCCCCCEEEEEE
NFNKQNILVDKIPQDDWKVVFGGNDVKGVRYVNIELESIPEGIEESEIKVFKEFLESLPK
ECCCCEEEEECCCCCCCEEEECCCCCCCEEEEEEEHHHCCCCCCHHHHHHHHHHHHHCCH
LERGQGSISVFTITQYENGDLLMTLLVRNATDEAVTMTKMPITLKTQKGETILSGVFDIE
HHCCCCCEEEEEEEEECCCCEEEEEEECCCCCCEEEEEECCEEEEECCCCEEEHEEEECC
NFTVNPYKARVLSLIFKKEVVNIEEDFDLSTCKIIFERE
CEEECHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA