| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
Click here to switch to the map view.
The map label for this gene is 28210221
Identifier: 28210221
GI number: 28210221
Start: 477101
End: 477976
Strand: Direct
Name: 28210221
Synonym: CTC00472
Alternate gene names: NA
Gene position: 477101-477976 (Clockwise)
Preceding gene: 28210220
Following gene: 28210223
Centisome position: 17.04
GC content: 25.91
Gene sequence:
>876_bases ATGAAGAAGTTTTTTAGAGGATTTCTAACTATCGTTTTTTTATTTTCATATTCAAACATTTGTTATGCTAAGAATATAAG TTCCAATATAGAATTTATTAATAAAAATATTTCAGCAGTTAATAGCTTATGTGCTTCTACTAATACACAAAATTGCAGAC AAGCATCATCAATACAGCAACTTAAACCATTATTAAAAACAGCCATGGAAAATAGAGAAGTTAATATAGTGATAAAATAT ACTGGTATGGATTGTTATAACAAAAGAAATGTAGATATAAATAAAATAAAAGATATTACAGAAAAACTATTAGATGAAGA CCATTATTTAAAATATTCAATTATAGGATATCGTATTGGAACATCAGGATATTATGGAAATGTAAATATTAAATTTAATT TTGACTATTTAACCACAAAAGCTCAGGAAGAATATGTAGATAAAAGGGTTGAAAGTATATTATCAGATATAATAACTGAT GGAATGAATGATTATGCAAAAGAAAAGGCTATACACGATTATATAGTAGCTAATGTTCAATATGATACATCCTTACAAGA ATATAGTGCTTATTCAGCATTAGCTAAAGGAAAATCAGTTTGCCAAGGATATTCTCTTTTAATGGTTAAAATGCTACAAA ACGTAGGAATTAAAAGTATAATTGTAGAAAGTATACCTATGAATCATGCTTGGAATATGGTTTATATAGACAATAAATGG TATCATGTAGATGCTACTTGGAATGACCCTATTCCAAATGTGCCTAATAGAGTTTTATATGACTATTATAATCTTACAGA TTATGAAATAAGTCAAAATATAAATGGAAAAATGCATGTATGGAATAGATATGAATATCCATCAACTAAACATTGA
Upstream 100 bases:
>100_bases TAATCGTGATTTCCACGATAAAGGCAAAACTATTGAAAGATAGTGACGCAAAGCTATAGGGTCTGTAAAATGACAGCCAG TTATCGAAAGGAGAATTTTT
Downstream 100 bases:
>100_bases TGGAAGTTTATAATACTTGGTTAAGTGATTATATAGATGATTATAATATAGTAGTTTATTAAATGAATACAAAAAGGAAC CAATGTTAATAAGTTGGTTC
Product: transglutaminase-like protease
Products: NA
Alternate protein names: S-Layer Protein; Transglutaminase/Protease; Transglutaminase Domain Protein; Protease; S-Layer Domain-Containing Protein; Ig Domain-Containing Domain-Containing Protein; S-Layer Domain Protein; Transglutaminase-Like Superfamily Protein; Peptidoglycan Endo-Beta-N-Acetylglucosaminidase; Murein Endopeptidase; S-Layer-Like Domain-Containing Protein; Cellulose 1 4-Beta-Cellobiosidase; Transglutaminase Family Protein; Transglutaminase-Like Protease; Protein Involved In Cytokinesis Contains TGc Domain; Bacterial Ig-Like Domain; Ig Domain-Containing Protein; Copper Amine Oxidase Domain Protein
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MKKFFRGFLTIVFLFSYSNICYAKNISSNIEFINKNISAVNSLCASTNTQNCRQASSIQQLKPLLKTAMENREVNIVIKY TGMDCYNKRNVDINKIKDITEKLLDEDHYLKYSIIGYRIGTSGYYGNVNIKFNFDYLTTKAQEEYVDKRVESILSDIITD GMNDYAKEKAIHDYIVANVQYDTSLQEYSAYSALAKGKSVCQGYSLLMVKMLQNVGIKSIIVESIPMNHAWNMVYIDNKW YHVDATWNDPIPNVPNRVLYDYYNLTDYEISQNINGKMHVWNRYEYPSTKH
Sequences:
>Translated_291_residues MKKFFRGFLTIVFLFSYSNICYAKNISSNIEFINKNISAVNSLCASTNTQNCRQASSIQQLKPLLKTAMENREVNIVIKY TGMDCYNKRNVDINKIKDITEKLLDEDHYLKYSIIGYRIGTSGYYGNVNIKFNFDYLTTKAQEEYVDKRVESILSDIITD GMNDYAKEKAIHDYIVANVQYDTSLQEYSAYSALAKGKSVCQGYSLLMVKMLQNVGIKSIIVESIPMNHAWNMVYIDNKW YHVDATWNDPIPNVPNRVLYDYYNLTDYEISQNINGKMHVWNRYEYPSTKH >Mature_291_residues MKKFFRGFLTIVFLFSYSNICYAKNISSNIEFINKNISAVNSLCASTNTQNCRQASSIQQLKPLLKTAMENREVNIVIKY TGMDCYNKRNVDINKIKDITEKLLDEDHYLKYSIIGYRIGTSGYYGNVNIKFNFDYLTTKAQEEYVDKRVESILSDIITD GMNDYAKEKAIHDYIVANVQYDTSLQEYSAYSALAKGKSVCQGYSLLMVKMLQNVGIKSIIVESIPMNHAWNMVYIDNKW YHVDATWNDPIPNVPNRVLYDYYNLTDYEISQNINGKMHVWNRYEYPSTKH
Specific function: Unknown
COG id: COG5279
COG function: function code D; Uncharacterized protein involved in cytokinesis, contains TGc (transglutaminase/protease-like) domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33829; Mature: 33829
Theoretical pI: Translated: 8.15; Mature: 8.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKFFRGFLTIVFLFSYSNICYAKNISSNIEFINKNISAVNSLCASTNTQNCRQASSIQQ CHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH LKPLLKTAMENREVNIVIKYTGMDCYNKRNVDINKIKDITEKLLDEDHYLKYSIIGYRIG HHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEEEEC TSGYYGNVNIKFNFDYLTTKAQEEYVDKRVESILSDIITDGMNDYAKEKAIHDYIVANVQ CCCEEEEEEEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEEEEE YDTSLQEYSAYSALAKGKSVCQGYSLLMVKMLQNVGIKSIIVESIPMNHAWNMVYIDNKW ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEEEECCEE YHVDATWNDPIPNVPNRVLYDYYNLTDYEISQNINGKMHVWNRYEYPSTKH EEEECCCCCCCCCCCCHHEEHHCCCCCEECCCCCCCEEEEEEEECCCCCCC >Mature Secondary Structure MKKFFRGFLTIVFLFSYSNICYAKNISSNIEFINKNISAVNSLCASTNTQNCRQASSIQQ CHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH LKPLLKTAMENREVNIVIKYTGMDCYNKRNVDINKIKDITEKLLDEDHYLKYSIIGYRIG HHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEEEEC TSGYYGNVNIKFNFDYLTTKAQEEYVDKRVESILSDIITDGMNDYAKEKAIHDYIVANVQ CCCEEEEEEEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEEEEE YDTSLQEYSAYSALAKGKSVCQGYSLLMVKMLQNVGIKSIIVESIPMNHAWNMVYIDNKW ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEEEECCEE YHVDATWNDPIPNVPNRVLYDYYNLTDYEISQNINGKMHVWNRYEYPSTKH EEEECCCCCCCCCCCCHHEEHHCCCCCEECCCCCCCEEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA