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The map label for this gene is ydfS [H]

Identifier: 28210168

GI number: 28210168

Start: 410409

End: 411149

Strand: Direct

Name: ydfS [H]

Synonym: CTC00415

Alternate gene names: 28210168

Gene position: 410409-411149 (Clockwise)

Preceding gene: 28210167

Following gene: 28210169

Centisome position: 14.66

GC content: 29.82

Gene sequence:

>741_bases
ATGAAAATGAATGAAGGTTTAGTAGTAGTCATCAGATCTATTATAGGATTTTTTTCTCTTCTTATTTTTGCTAGAGTTCT
AGGAAAGCAACAAGTAAGTCAACTTACATTTTTCGAATATGTACTAGGTATTACAATTGGTTCTACCGCTAGTACATTAA
GTACGGATTTATCAACTAGAGCATGGCCACATTGGGTTGCGCTAATAAGTTGGGCAATACTTGGTTACATAATGCAGCTT
ATAACATTGAAACAGAGAACAATGGCAAAATATATAGATGGCGAACCCACAATTGTAATTGTTAATGGTAAAATAATGGA
AGAAGCATTGAAAACCATGAAGTATAGAGCAGCAGATATTTTACAACTTCTTAGAAACAAAGATATATTTGATTTAAAAC
AGGTTAAATTTGCAATAATAGAGCCAAATGGTCAAATTTCTGTTCTTAAAAAGGAAGAATATTTACCTGTAACGCCTCAG
GATATGAATATATCACCTTCTCCATCAGATATAAGTATAGAAGTAATTTATGATGGTTTAATTATAGAAGAACATTTAAA
ATGGTTTAAAAAAGATAAAAAGTGGTTAAAGAAAGAATTGAAAAAACGAAATATAAATGATCCATCAGAAGTATTTTTAG
CTACTATGGATAATACGGGAAATTTCTATGCAGATAAATATAATGACTTAATGAAAAAAGAAAATGTAACTAAGGATGGT
ACCTATAAAGGACCGCTATAA

Upstream 100 bases:

>100_bases
TATTGTTTAGATAGCCTATTTTTTATTAAGTTTTTACTACATTTTAGTATAATTATATAATTTTGATAGACAATAATATG
TAAGTAACAAAAAAGGGGAA

Downstream 100 bases:

>100_bases
TAGTAAGAAAGGTGATATTATGAGTGATAAAATGAAAAAAAATTTAGCTAAAGGTATCCCTATTATTACATTAGTCATTT
TTATATTAGTTATGCTTAGT

Product: membrane-associated protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MKMNEGLVVVIRSIIGFFSLLIFARVLGKQQVSQLTFFEYVLGITIGSTASTLSTDLSTRAWPHWVALISWAILGYIMQL
ITLKQRTMAKYIDGEPTIVIVNGKIMEEALKTMKYRAADILQLLRNKDIFDLKQVKFAIIEPNGQISVLKKEEYLPVTPQ
DMNISPSPSDISIEVIYDGLIIEEHLKWFKKDKKWLKKELKKRNINDPSEVFLATMDNTGNFYADKYNDLMKKENVTKDG
TYKGPL

Sequences:

>Translated_246_residues
MKMNEGLVVVIRSIIGFFSLLIFARVLGKQQVSQLTFFEYVLGITIGSTASTLSTDLSTRAWPHWVALISWAILGYIMQL
ITLKQRTMAKYIDGEPTIVIVNGKIMEEALKTMKYRAADILQLLRNKDIFDLKQVKFAIIEPNGQISVLKKEEYLPVTPQ
DMNISPSPSDISIEVIYDGLIIEEHLKWFKKDKKWLKKELKKRNINDPSEVFLATMDNTGNFYADKYNDLMKKENVTKDG
TYKGPL
>Mature_246_residues
MKMNEGLVVVIRSIIGFFSLLIFARVLGKQQVSQLTFFEYVLGITIGSTASTLSTDLSTRAWPHWVALISWAILGYIMQL
ITLKQRTMAKYIDGEPTIVIVNGKIMEEALKTMKYRAADILQLLRNKDIFDLKQVKFAIIEPNGQISVLKKEEYLPVTPQ
DMNISPSPSDISIEVIYDGLIIEEHLKWFKKDKKWLKKELKKRNINDPSEVFLATMDNTGNFYADKYNDLMKKENVTKDG
TYKGPL

Specific function: Unknown

COG id: COG2323

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0702 family [H]

Homologues:

Organism=Escherichia coli, GI1787135, Length=140, Percent_Identity=26.4285714285714, Blast_Score=66, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007353
- InterPro:   IPR023090 [H]

Pfam domain/function: PF04239 DUF421 [H]

EC number: NA

Molecular weight: Translated: 28173; Mature: 28173

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMNEGLVVVIRSIIGFFSLLIFARVLGKQQVSQLTFFEYVLGITIGSTASTLSTDLSTR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHC
AWPHWVALISWAILGYIMQLITLKQRTMAKYIDGEPTIVIVNGKIMEEALKTMKYRAADI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHH
LQLLRNKDIFDLKQVKFAIIEPNGQISVLKKEEYLPVTPQDMNISPSPSDISIEVIYDGL
HHHHHCCCCCCHHHEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCC
IIEEHLKWFKKDKKWLKKELKKRNINDPSEVFLATMDNTGNFYADKYNDLMKKENVTKDG
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEEEEECCCCCCCHHHHHHHHHHCCCCCCC
TYKGPL
CCCCCC
>Mature Secondary Structure
MKMNEGLVVVIRSIIGFFSLLIFARVLGKQQVSQLTFFEYVLGITIGSTASTLSTDLSTR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHC
AWPHWVALISWAILGYIMQLITLKQRTMAKYIDGEPTIVIVNGKIMEEALKTMKYRAADI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHH
LQLLRNKDIFDLKQVKFAIIEPNGQISVLKKEEYLPVTPQDMNISPSPSDISIEVIYDGL
HHHHHCCCCCCHHHEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCC
IIEEHLKWFKKDKKWLKKELKKRNINDPSEVFLATMDNTGNFYADKYNDLMKKENVTKDG
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEEEEECCCCCCCHHHHHHHHHHCCCCCCC
TYKGPL
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]