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The map label for this gene is ytlD [H]

Identifier: 28210159

GI number: 28210159

Start: 400654

End: 401451

Strand: Direct

Name: ytlD [H]

Synonym: CTC00406

Alternate gene names: 28210159

Gene position: 400654-401451 (Clockwise)

Preceding gene: 28210158

Following gene: 28210160

Centisome position: 14.31

GC content: 28.45

Gene sequence:

>798_bases
ATGAAAAGTAATGATTTAACTCCCTATGAACAATTTTTAAGAAATAAAAAGAGGGAAAAAAGAAAAATACTATTTTGGCA
AATATTTATTCTTATAATATTCCTACTTCAATGGGAGATACTAGCGAAAAATAAAATAATTGATGTTTTTTTATTTAGCA
AACCTTCAGATATACATTGTCTTTTCAAAGAATATGTAAAAAACGGTGAACTTTTTAGACATATAGGTATATCTCTTTGG
GAAACTATCTTAGGATTTACTATAGGTACTATTTTGGGAATTTTAATAGCTATATTACTTTGGTGGTTTGAAACTGCATC
TAAAATTTTAGATCCATTTTTAGTTGTTTTAAATGCATTACCTAAAACTGCCCTAGCACCTATTTTAATAGTTTGGGCCG
GTGCTGGTGTTAAAGGAATAGTTGTTATAGCTATAACGTTGTCTATAGTCACTACAATCTTATCTGCATATAACTACTTT
ATGAACGCAGACGAAGAAAAAATTAAGATGTTAAAGAGTTTTGGAGCAACTAAAGGACAAATATTAACTAAACTTATATT
ACCCTCAAATGTTGGAAATATCATTAATATTATAAAAATAAACATAGGTTTATCCTGGGTAGGAGTTATAGTAGGGGAGT
TCTTAGTATCTAGATATGGTATTGGATATTTAATAGTATACGGTGGACAAGTGTTTAAATTAGATTTAGTTATGATGGGA
GTTGCTGTATTAGCAGTTTGTGCTTTAGTTATGTATCAAATTGTAAATGCAATAGAAAAAAGATATAAAGAAGGGTGA

Upstream 100 bases:

>100_bases
ATTAACCTTACAGTTAATGGAGAAAAGACACCTTTATCTGCTCGTAAGGCACCAGAATTTAAAGATTATTTTGATCTTTT
ATGGAAGGAGTTAGATATAT

Downstream 100 bases:

>100_bases
AATCATGAGGAAAATTAAAAAAATATTATTAATATTAATTTGTATTACAATGACTACATTAATGTTTACTGGATGTTCTA
AAGAGGATGAAAAAACTAAA

Product: ABC transporter permease protein

Products: taurine [Cytoplasm]; ADP; phosphate [C]

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MKSNDLTPYEQFLRNKKREKRKILFWQIFILIIFLLQWEILAKNKIIDVFLFSKPSDIHCLFKEYVKNGELFRHIGISLW
ETILGFTIGTILGILIAILLWWFETASKILDPFLVVLNALPKTALAPILIVWAGAGVKGIVVIAITLSIVTTILSAYNYF
MNADEEKIKMLKSFGATKGQILTKLILPSNVGNIINIIKINIGLSWVGVIVGEFLVSRYGIGYLIVYGGQVFKLDLVMMG
VAVLAVCALVMYQIVNAIEKRYKEG

Sequences:

>Translated_265_residues
MKSNDLTPYEQFLRNKKREKRKILFWQIFILIIFLLQWEILAKNKIIDVFLFSKPSDIHCLFKEYVKNGELFRHIGISLW
ETILGFTIGTILGILIAILLWWFETASKILDPFLVVLNALPKTALAPILIVWAGAGVKGIVVIAITLSIVTTILSAYNYF
MNADEEKIKMLKSFGATKGQILTKLILPSNVGNIINIIKINIGLSWVGVIVGEFLVSRYGIGYLIVYGGQVFKLDLVMMG
VAVLAVCALVMYQIVNAIEKRYKEG
>Mature_265_residues
MKSNDLTPYEQFLRNKKREKRKILFWQIFILIIFLLQWEILAKNKIIDVFLFSKPSDIHCLFKEYVKNGELFRHIGISLW
ETILGFTIGTILGILIAILLWWFETASKILDPFLVVLNALPKTALAPILIVWAGAGVKGIVVIAITLSIVTTILSAYNYF
MNADEEKIKMLKSFGATKGQILTKLILPSNVGNIINIIKINIGLSWVGVIVGEFLVSRYGIGYLIVYGGQVFKLDLVMMG
VAVLAVCALVMYQIVNAIEKRYKEG

Specific function: Part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1786564, Length=263, Percent_Identity=23.574144486692, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI87081802, Length=231, Percent_Identity=23.3766233766234, Blast_Score=77, Evalue=9e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 29887; Mature: 29887

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSNDLTPYEQFLRNKKREKRKILFWQIFILIIFLLQWEILAKNKIIDVFLFSKPSDIHC
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHH
LFKEYVKNGELFRHIGISLWETILGFTIGTILGILIAILLWWFETASKILDPFLVVLNAL
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PKTALAPILIVWAGAGVKGIVVIAITLSIVTTILSAYNYFMNADEEKIKMLKSFGATKGQ
CHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHH
ILTKLILPSNVGNIINIIKINIGLSWVGVIVGEFLVSRYGIGYLIVYGGQVFKLDLVMMG
HHHHHHCCCCCCHHEEHHEEECCHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHH
VAVLAVCALVMYQIVNAIEKRYKEG
HHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKSNDLTPYEQFLRNKKREKRKILFWQIFILIIFLLQWEILAKNKIIDVFLFSKPSDIHC
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHH
LFKEYVKNGELFRHIGISLWETILGFTIGTILGILIAILLWWFETASKILDPFLVVLNAL
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PKTALAPILIVWAGAGVKGIVVIAITLSIVTTILSAYNYFMNADEEKIKMLKSFGATKGQ
CHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHH
ILTKLILPSNVGNIINIIKINIGLSWVGVIVGEFLVSRYGIGYLIVYGGQVFKLDLVMMG
HHHHHHCCCCCCHHEEHHEEECCHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHH
VAVLAVCALVMYQIVNAIEKRYKEG
HHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: taurine [Periplasm]; ATP; H2O [C]

Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]