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The map label for this gene is tmpC [H]

Identifier: 28210125

GI number: 28210125

Start: 356136

End: 357215

Strand: Direct

Name: tmpC [H]

Synonym: CTC00369

Alternate gene names: 28210125

Gene position: 356136-357215 (Clockwise)

Preceding gene: 28210124

Following gene: 28210126

Centisome position: 12.72

GC content: 33.98

Gene sequence:

>1080_bases
ATGAATAAGAAAAAAGTTGTAGCACTTCTATCAGCAGCAATAATGACTGTGTCATTATTTGCCGGTTGTGGTGGAGCAGA
AAAGAAATCTGCTGAAGCAGGAAAAGAGCAATTAAAAGTTGGTCTTGTAACAGACCAAGGAGGAGTAAATGATGGTTCCT
TTAACCAATCAGCTCATGAAGGAATTTCTAAGGCAGAAAAAGAACTAGGAATAACACAAATAAATGCCATAGAATCAAAA
CAACAAGAACAATACCAACCAAATTTAAAAATTATGGCAGGTGAAGCTGATTTAACCGTAGGTTGTGGATTCATGATGGT
TAAAGCTATGGAAAACGTATCCAAAGAAATAAAAGATAAGAAATTTTTAATCGTTGACCAGGAAGTTAAAACACCAAATA
CCCTATCAATAACTTTTAAAGAAGAAGAAGGATCTTTCTTAGCTGGAGTTATAGCAGGTAAGATGACAAAAACTAATAAA
GTTGGTTTCGTAGGTGGAAAAGAAAGTGAAGTTATAAATAGATTTGAAACAGGATTTGCAGCTGGGGTTATGTCAGTTAA
TCCAGAAGCAGGAAAATTATTAAAACCAGTTAATGAAAAAACTCCTGGTAAAAATGTAAAATATGTAGATTCCTTTGAAG
ATCAACAAAAAGGAACAGAAGCTGCTAAAATGCTTTATAATTCAGGTTGTGATATAGTATTCCACGCAGCAGGAGGAGTA
GGGCTTGGAGTATTTAAAGCTGCAAAGGAAATGAATAAATGGGCTATAGGGGTTGACTCTGACCAAGCAGCAGCATTACC
AGAATATAAGGATATAATACTTATCTCTATGGAAAAACAAGTAGGAGAAGCTGTTATAGATACTATAAAGAGTATTCAAG
AAGACAAGTTTGAAGGTGGAAAGCATAAAGTTCTTGGAATAAAAGAAGATAGAGTTGGAATAGCACCAACAAAACATCCA
GATCTTACTAAGGAAGCAGATGAACTATCAGAAAAATACAAAGCAGCTATAAAAGCAGATAAATTTAAAGTTCCAGGAAC
AAGAAAAGAACTTTTACAGTTTAAAGCTCCAGAAATTTAA

Upstream 100 bases:

>100_bases
TATTAATGTAAAATAAGAAGGAAATACCATTATTATGTAGAAATATTATATTACTAGTAGAAATTATAATTTAAATTTAA
ACATAGGGAGGAATAATTAA

Downstream 100 bases:

>100_bases
ATTTAAGAGAGAAAGCTAGGTGCTTTTGCATCTAGCTTTTTTAATCAATAGGAAGGAGGCCCAAAATGGAAAAAGTTGTT
GAAATGAAGGGAATAACAAA

Product: membrane lipoprotein tmpC precursor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 359; Mature: 359

Protein sequence:

>359_residues
MNKKKVVALLSAAIMTVSLFAGCGGAEKKSAEAGKEQLKVGLVTDQGGVNDGSFNQSAHEGISKAEKELGITQINAIESK
QQEQYQPNLKIMAGEADLTVGCGFMMVKAMENVSKEIKDKKFLIVDQEVKTPNTLSITFKEEEGSFLAGVIAGKMTKTNK
VGFVGGKESEVINRFETGFAAGVMSVNPEAGKLLKPVNEKTPGKNVKYVDSFEDQQKGTEAAKMLYNSGCDIVFHAAGGV
GLGVFKAAKEMNKWAIGVDSDQAAALPEYKDIILISMEKQVGEAVIDTIKSIQEDKFEGGKHKVLGIKEDRVGIAPTKHP
DLTKEADELSEKYKAAIKADKFKVPGTRKELLQFKAPEI

Sequences:

>Translated_359_residues
MNKKKVVALLSAAIMTVSLFAGCGGAEKKSAEAGKEQLKVGLVTDQGGVNDGSFNQSAHEGISKAEKELGITQINAIESK
QQEQYQPNLKIMAGEADLTVGCGFMMVKAMENVSKEIKDKKFLIVDQEVKTPNTLSITFKEEEGSFLAGVIAGKMTKTNK
VGFVGGKESEVINRFETGFAAGVMSVNPEAGKLLKPVNEKTPGKNVKYVDSFEDQQKGTEAAKMLYNSGCDIVFHAAGGV
GLGVFKAAKEMNKWAIGVDSDQAAALPEYKDIILISMEKQVGEAVIDTIKSIQEDKFEGGKHKVLGIKEDRVGIAPTKHP
DLTKEADELSEKYKAAIKADKFKVPGTRKELLQFKAPEI
>Mature_359_residues
MNKKKVVALLSAAIMTVSLFAGCGGAEKKSAEAGKEQLKVGLVTDQGGVNDGSFNQSAHEGISKAEKELGITQINAIESK
QQEQYQPNLKIMAGEADLTVGCGFMMVKAMENVSKEIKDKKFLIVDQEVKTPNTLSITFKEEEGSFLAGVIAGKMTKTNK
VGFVGGKESEVINRFETGFAAGVMSVNPEAGKLLKPVNEKTPGKNVKYVDSFEDQQKGTEAAKMLYNSGCDIVFHAAGGV
GLGVFKAAKEMNKWAIGVDSDQAAALPEYKDIILISMEKQVGEAVIDTIKSIQEDKFEGGKHKVLGIKEDRVGIAPTKHP
DLTKEADELSEKYKAAIKADKFKVPGTRKELLQFKAPEI

Specific function: Unknown

COG id: COG1744

COG function: function code R; Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BMP lipoprotein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003760 [H]

Pfam domain/function: PF02608 Bmp [H]

EC number: NA

Molecular weight: Translated: 38681; Mature: 38681

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKKKVVALLSAAIMTVSLFAGCGGAEKKSAEAGKEQLKVGLVTDQGGVNDGSFNQSAHE
CCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHHEEEEEEECCCCCCCCCCCCHHHH
GISKAEKELGITQINAIESKQQEQYQPNLKIMAGEADLTVGCGFMMVKAMENVSKEIKDK
HHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEECCCCEEECHHHHHHHHHHHHHHHHCCC
KFLIVDQEVKTPNTLSITFKEEEGSFLAGVIAGKMTKTNKVGFVGGKESEVINRFETGFA
EEEEEECCCCCCCEEEEEEECCCCCEEEEHHHCCCCCCCCEEECCCCHHHHHHHHHHHHH
AGVMSVNPEAGKLLKPVNEKTPGKNVKYVDSFEDQQKGTEAAKMLYNSGCDIVFHAAGGV
HCEEEECCCHHHHHCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCC
GLGVFKAAKEMNKWAIGVDSDQAAALPEYKDIILISMEKQVGEAVIDTIKSIQEDKFEGG
CHHHHHHHHHHHHEEECCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCC
KHKVLGIKEDRVGIAPTKHPDLTKEADELSEKYKAAIKADKFKVPGTRKELLQFKAPEI
CEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEECCCCHHHHHHHCCCCC
>Mature Secondary Structure
MNKKKVVALLSAAIMTVSLFAGCGGAEKKSAEAGKEQLKVGLVTDQGGVNDGSFNQSAHE
CCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHHEEEEEEECCCCCCCCCCCCHHHH
GISKAEKELGITQINAIESKQQEQYQPNLKIMAGEADLTVGCGFMMVKAMENVSKEIKDK
HHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEECCCCEEECHHHHHHHHHHHHHHHHCCC
KFLIVDQEVKTPNTLSITFKEEEGSFLAGVIAGKMTKTNKVGFVGGKESEVINRFETGFA
EEEEEECCCCCCCEEEEEEECCCCCEEEEHHHCCCCCCCCEEECCCCHHHHHHHHHHHHH
AGVMSVNPEAGKLLKPVNEKTPGKNVKYVDSFEDQQKGTEAAKMLYNSGCDIVFHAAGGV
HCEEEECCCHHHHHCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCC
GLGVFKAAKEMNKWAIGVDSDQAAALPEYKDIILISMEKQVGEAVIDTIKSIQEDKFEGG
CHHHHHHHHHHHHEEECCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCC
KHKVLGIKEDRVGIAPTKHPDLTKEADELSEKYKAAIKADKFKVPGTRKELLQFKAPEI
CEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEECCCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377 [H]