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The map label for this gene is yhbA [H]

Identifier: 28210109

GI number: 28210109

Start: 338583

End: 339566

Strand: Direct

Name: yhbA [H]

Synonym: CTC00352

Alternate gene names: 28210109

Gene position: 338583-339566 (Clockwise)

Preceding gene: 28210108

Following gene: 28210110

Centisome position: 12.1

GC content: 27.64

Gene sequence:

>984_bases
ATGAAAGATAAGAAAAAATTGATTTTAGATTATTGTAAAGATTTAGGACTAGATACAGTTGGTATGACAGATGTTAGAAA
AATCAATGAGCTAGAGGATTATTTGGTCTATAGAAAAGAAAAAGGATATGAAAATGAATTTGAAGAAGAAAATATAGAAA
AGAGAATAAATTTAGGAGAAGTATGTAGTTGGGGAAAGGTGATAATAAGTATCGCCTTTCCTTATATGTTTAATTTTAAG
TTTGAAGATGGAGTATATTTTTCTAAATACACTCAAGGGAGAGATTATCACAAGGTAGTAGGAGAATATTTAAAAAAAAT
ATGCTGCTTTATAGAAAGTCTAGGTGGAAAAGCTGAATACTTTGTGGATAGTAATTGTCTTCCAGAAAGATATATTGCAA
AGCTTTGTGGAATTGGTTTCATAGGAAAGAATAATATGTTAATAACGGAGAAGTACGGTTCTTATGTATTTTTAGGAGAA
ATTATAACAGATTTCTCTTTACCTAAAGATAATGAAAAAAATAATAAATGCGGACAATGTGACTTATGTTTAAAAGCTTG
TCCTACGAAATCTATAAAAGAAAAAGAAAGTAATCCAAATATATGCCTGTCTTACTTAACACAGAAAAAAGATTTAGAAG
ATATGTGGTTAGATAAATTAAAAGGTAGATTATTTGGATGTGATACTTGTCAAAGAGTGTGTCCTTTCAATATGGAAGTA
GAAAAATCACCTTTAATGGAATTAAAGCCTTTAGATTTTATGACAAATTTGCATTTAGAAGAATTAATATCTTTAAATAA
TAGAGAATTTAAAGATAAGTATGCCGTATCTTCTTGTGGGTGGAGAGGTAAGAATATTTTAATAAGGAATGCACTTATTA
ATGAATTTTATTATAATAAGGACGGAACTTTAGAAGGGAAAAATTTCAACTCTCCTTACATAAAGGATTATTACAGTAGA
CTTTTAAAGTTACACAATTTATAA

Upstream 100 bases:

>100_bases
TGCAGTAGGGGCACCGGCTAAAATAGTTGGAGAAAAGAAATCTGAAGTTGTAGATATGAATCTATACAGAACTATAGTAA
GATAATGGAGTGTAAATCTT

Downstream 100 bases:

>100_bases
TTTAATTATAAAAGTATGAAAGGTGGAACAATTTATGATTTCTCCTAAGTTAGCAAAGTTAATATCTTACTTACCTGATA
GTATTGTAAGGAAGATATCC

Product: iron-sulfur cluster-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MKDKKKLILDYCKDLGLDTVGMTDVRKINELEDYLVYRKEKGYENEFEEENIEKRINLGEVCSWGKVIISIAFPYMFNFK
FEDGVYFSKYTQGRDYHKVVGEYLKKICCFIESLGGKAEYFVDSNCLPERYIAKLCGIGFIGKNNMLITEKYGSYVFLGE
IITDFSLPKDNEKNNKCGQCDLCLKACPTKSIKEKESNPNICLSYLTQKKDLEDMWLDKLKGRLFGCDTCQRVCPFNMEV
EKSPLMELKPLDFMTNLHLEELISLNNREFKDKYAVSSCGWRGKNILIRNALINEFYYNKDGTLEGKNFNSPYIKDYYSR
LLKLHNL

Sequences:

>Translated_327_residues
MKDKKKLILDYCKDLGLDTVGMTDVRKINELEDYLVYRKEKGYENEFEEENIEKRINLGEVCSWGKVIISIAFPYMFNFK
FEDGVYFSKYTQGRDYHKVVGEYLKKICCFIESLGGKAEYFVDSNCLPERYIAKLCGIGFIGKNNMLITEKYGSYVFLGE
IITDFSLPKDNEKNNKCGQCDLCLKACPTKSIKEKESNPNICLSYLTQKKDLEDMWLDKLKGRLFGCDTCQRVCPFNMEV
EKSPLMELKPLDFMTNLHLEELISLNNREFKDKYAVSSCGWRGKNILIRNALINEFYYNKDGTLEGKNFNSPYIKDYYSR
LLKLHNL
>Mature_327_residues
MKDKKKLILDYCKDLGLDTVGMTDVRKINELEDYLVYRKEKGYENEFEEENIEKRINLGEVCSWGKVIISIAFPYMFNFK
FEDGVYFSKYTQGRDYHKVVGEYLKKICCFIESLGGKAEYFVDSNCLPERYIAKLCGIGFIGKNNMLITEKYGSYVFLGE
IITDFSLPKDNEKNNKCGQCDLCLKACPTKSIKEKESNPNICLSYLTQKKDLEDMWLDKLKGRLFGCDTCQRVCPFNMEV
EKSPLMELKPLDFMTNLHLEELISLNNREFKDKYAVSSCGWRGKNILIRNALINEFYYNKDGTLEGKNFNSPYIKDYYSR
LLKLHNL

Specific function: Unknown

COG id: COG1600

COG function: function code C; Uncharacterized Fe-S protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 HEAT-like PBS-type repeats [H]

Homologues:

Organism=Escherichia coli, GI1790608, Length=274, Percent_Identity=31.7518248175182, Blast_Score=121, Evalue=7e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004453
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR011989
- InterPro:   IPR016024
- InterPro:   IPR013542
- InterPro:   IPR009051
- InterPro:   IPR004155 [H]

Pfam domain/function: PF08331 DUF1730; PF03130 HEAT_PBS [H]

EC number: NA

Molecular weight: Translated: 38177; Mature: 38177

Theoretical pI: Translated: 7.44; Mature: 7.44

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
4.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDKKKLILDYCKDLGLDTVGMTDVRKINELEDYLVYRKEKGYENEFEEENIEKRINLGE
CCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHH
VCSWGKVIISIAFPYMFNFKFEDGVYFSKYTQGRDYHKVVGEYLKKICCFIESLGGKAEY
HHHHHHHHHHHHHHHHEEEEECCCEEEEHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEE
FVDSNCLPERYIAKLCGIGFIGKNNMLITEKYGSYVFLGEIITDFSLPKDNEKNNKCGQC
EECCCCCCHHHHHHHHCCCEECCCCEEEEECCCCEEEEHHHHHHCCCCCCCCCCCCCCCH
DLCLKACPTKSIKEKESNPNICLSYLTQKKDLEDMWLDKLKGRLFGCDTCQRVCPFNMEV
HHHHHHCCCCHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHCCCEECCHHHHHHCCCCCCC
EKSPLMELKPLDFMTNLHLEELISLNNREFKDKYAVSSCGWRGKNILIRNALINEFYYNK
CCCCCCCCCCHHHHHHCCHHHHHHCCCCCHHHHHHHHHCCCCCCCEEEHHHHHHHHHCCC
DGTLEGKNFNSPYIKDYYSRLLKLHNL
CCCCCCCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKDKKKLILDYCKDLGLDTVGMTDVRKINELEDYLVYRKEKGYENEFEEENIEKRINLGE
CCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHH
VCSWGKVIISIAFPYMFNFKFEDGVYFSKYTQGRDYHKVVGEYLKKICCFIESLGGKAEY
HHHHHHHHHHHHHHHHEEEEECCCEEEEHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEE
FVDSNCLPERYIAKLCGIGFIGKNNMLITEKYGSYVFLGEIITDFSLPKDNEKNNKCGQC
EECCCCCCHHHHHHHHCCCEECCCCEEEEECCCCEEEEHHHHHHCCCCCCCCCCCCCCCH
DLCLKACPTKSIKEKESNPNICLSYLTQKKDLEDMWLDKLKGRLFGCDTCQRVCPFNMEV
HHHHHHCCCCHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHCCCEECCHHHHHHCCCCCCC
EKSPLMELKPLDFMTNLHLEELISLNNREFKDKYAVSSCGWRGKNILIRNALINEFYYNK
CCCCCCCCCCHHHHHHCCHHHHHHCCCCCHHHHHHHHHCCCCCCCEEEHHHHHHHHHCCC
DGTLEGKNFNSPYIKDYYSRLLKLHNL
CCCCCCCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]