| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is 28210093
Identifier: 28210093
GI number: 28210093
Start: 321139
End: 321825
Strand: Direct
Name: 28210093
Synonym: CTC00334
Alternate gene names: NA
Gene position: 321139-321825 (Clockwise)
Preceding gene: 28210092
Following gene: 28210095
Centisome position: 11.47
GC content: 27.8
Gene sequence:
>687_bases ATGGCTTTATATGCAATATCGGATTTTCACTTATCTTTTACTACGGATAAACCTATGAATGTTTTCGGAGAAAATTGGAA AGATCACCATAAAAAAATAAAAGAAAATTGGATGAGAACCGTAAAAGAAGAAGATACAGTAATAATAGCTGGGGATATAT CTTGGTCCATGAACATAGAAGATGGTATGGAAGATTTACATTGGATAAGTAAGTTACCAGGAGAAAAAATATTAGTAAAA GGTAATCATGATTATTGGTGGACTTCTATATCTAAACTAAACAATTTATATCCAGATATGAAGTTTATTCAAAATAATTA TTTTCAATATGAAGATTATGCTTTATGTGGTACTAGAGGATGGATATGCCCAAGAGGAGACAACTTTACAGAGCATGATA GTAAAGTTTATAAAAGAGAACTTATAAGATTAAAATTATCATTGGATTCGGCTATAAAAGACGACTATGACAATTTTATA GTAGTACTTCATTATCCACCTTTTAATGGTGCAAAAGTAGATGAAGGTTTTTTAGAAATATTTAAGGATTACAATGTGAA AAAAGTAATTTTTGGGCATTTACATGGAATGCCTAAACAAAATATTTTTAATAGAGAAATTGATGGAATAGAATACCTAT TAACTTCTTGTGATTACTTAGATTTTAACCTTATAAAAATATTATAA
Upstream 100 bases:
>100_bases TAGGCGATGATATTCCTTATGAATTGTACGATGCTGTGGCACAAGTTATTGCTTATGTTATGGATATAGATGAGATTATA GGTAGAAGGTGATTTAATTA
Downstream 100 bases:
>100_bases TTATTGCAAATCATTAAGTAGGGGTATATACGCCCCTACTTAATGACTACCTAAATAATTTTGAAATCCATCCCTTATCA TTGCTATGAGACTTTTCTGA
Product: putative phosphohydrolase
Products: NA
Alternate protein names: Phosphohydrolase; Ser/Thr Protein Phosphatase Family Protein; Phosphoesterase; Phoshohydrolase; Phosphohydrolase Metallophosphoesterase; Ser/Thr Phosphatase Family Protein; Ser/Thr Protein Phosphatase
Number of amino acids: Translated: 228; Mature: 227
Protein sequence:
>228_residues MALYAISDFHLSFTTDKPMNVFGENWKDHHKKIKENWMRTVKEEDTVIIAGDISWSMNIEDGMEDLHWISKLPGEKILVK GNHDYWWTSISKLNNLYPDMKFIQNNYFQYEDYALCGTRGWICPRGDNFTEHDSKVYKRELIRLKLSLDSAIKDDYDNFI VVLHYPPFNGAKVDEGFLEIFKDYNVKKVIFGHLHGMPKQNIFNREIDGIEYLLTSCDYLDFNLIKIL
Sequences:
>Translated_228_residues MALYAISDFHLSFTTDKPMNVFGENWKDHHKKIKENWMRTVKEEDTVIIAGDISWSMNIEDGMEDLHWISKLPGEKILVK GNHDYWWTSISKLNNLYPDMKFIQNNYFQYEDYALCGTRGWICPRGDNFTEHDSKVYKRELIRLKLSLDSAIKDDYDNFI VVLHYPPFNGAKVDEGFLEIFKDYNVKKVIFGHLHGMPKQNIFNREIDGIEYLLTSCDYLDFNLIKIL >Mature_227_residues ALYAISDFHLSFTTDKPMNVFGENWKDHHKKIKENWMRTVKEEDTVIIAGDISWSMNIEDGMEDLHWISKLPGEKILVKG NHDYWWTSISKLNNLYPDMKFIQNNYFQYEDYALCGTRGWICPRGDNFTEHDSKVYKRELIRLKLSLDSAIKDDYDNFIV VLHYPPFNGAKVDEGFLEIFKDYNVKKVIFGHLHGMPKQNIFNREIDGIEYLLTSCDYLDFNLIKIL
Specific function: Unknown
COG id: COG1768
COG function: function code R; Predicted phosphohydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26964; Mature: 26833
Theoretical pI: Translated: 5.81; Mature: 5.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALYAISDFHLSFTTDKPMNVFGENWKDHHKKIKENWMRTVKEEDTVIIAGDISWSMNIE CEEEEEEEEEEEEECCCCHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCEEEEEHH DGMEDLHWISKLPGEKILVKGNHDYWWTSISKLNNLYPDMKFIQNNYFQYEDYALCGTRG HHHHHHHHHHHCCCCEEEEECCCCEEHHHHHHHHHHCCCHHHHHCCCEEECCEEEECCCC WICPRGDNFTEHDSKVYKRELIRLKLSLDSAIKDDYDNFIVVLHYPPFNGAKVDEGFLEI CCCCCCCCCCHHHHHHHHHHHHHHEEHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHH FKDYNVKKVIFGHLHGMPKQNIFNREIDGIEYLLTSCDYLDFNLIKIL HHCCCHHHEEHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEC >Mature Secondary Structure ALYAISDFHLSFTTDKPMNVFGENWKDHHKKIKENWMRTVKEEDTVIIAGDISWSMNIE EEEEEEEEEEEEECCCCHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCEEEEEHH DGMEDLHWISKLPGEKILVKGNHDYWWTSISKLNNLYPDMKFIQNNYFQYEDYALCGTRG HHHHHHHHHHHCCCCEEEEECCCCEEHHHHHHHHHHCCCHHHHHCCCEEECCEEEECCCC WICPRGDNFTEHDSKVYKRELIRLKLSLDSAIKDDYDNFIVVLHYPPFNGAKVDEGFLEI CCCCCCCCCCHHHHHHHHHHHHHHEEHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHH FKDYNVKKVIFGHLHGMPKQNIFNREIDGIEYLLTSCDYLDFNLIKIL HHCCCHHHEEHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA