Click here to switch to the map view.

The map label for this gene is yndE [H]

Identifier: 28210048

GI number: 28210048

Start: 270058

End: 271167

Strand: Direct

Name: yndE [H]

Synonym: CTC00286

Alternate gene names: 28210048

Gene position: 270058-271167 (Clockwise)

Preceding gene: 28210047

Following gene: 28210049

Centisome position: 9.65

GC content: 27.57

Gene sequence:

>1110_bases
GTGATAGAATTGAAAGATAAAAATATAATATCTTCCTATGGATTGTTCGTAACTTTGGTAGTAACAATAATAGGTGTAAA
TGTATTTTCTATTCCTAGGGATCTTGCTACTATAGTTGGAGTAGATGGATGGGTTTCTATAATAATTGGAGGAATAATAA
CATATGTAGCGGCCTACTTAATATATAAATGTATACAAAAAAGTGACTATAAGGATTGTTATGATATATTTCAAAATTCC
TTTGGGAAAGTTTTAGGAAACATTGTAGCATTAAGTATTGTTGCATATGGTTTAATATTTATATCAGTAGCATTAAGGGC
ATTCACTGAAGAAATTAAATTGTATCTCTTAAAAGATACTCCTACAGAGTTTATATTTGTAGTAATGATATTATCTGGGG
TATATTTGGTAAGAGCTGAATTAGAGCATTTAATACGGTTTAATGAAATTAGCTTTTGGATTATGTTTATCCCTATTGTT
TTTGTTCTTTTAGTATCTGCTTATGGGGTGGATTTTACAAATTTATTGCCTGTTTTTAAAAACAAACCATTATCATATTT
TAAAGGGTCTATAAATGTTTTTTATAGATTTGGTGGAATTGGTATATTGTTTCTTATTGTTCCAATTCTAAAGAAAAAAG
ACAAAACGCCAAAGGTTATGAAAAAGAGTCTACTATTTATTTCTGTGTTTTATATTGTAATTTTTATATTATCAATAGCT
ACATTTGGGGAAGAACAGTCTAAAATTCTATTATGGCCTACTATAACTATGATAAGCTCCATAGATATTCCTGGATCATT
CATACAAAAATGGGAGGGTATAGTAATGGCTATCTGGATAATGTTTTATTATACAAGTTTTATAAACTATTATTATCTTT
CCTCAGATGTATTAAAAAATATTTTAAAACTAGATGATATAAAATTATCTTCAGCGATTTTAGTTCCCTTTATTTATATT
ATAGGTCTATATCCTGAAAATGTAGCTCAGCTAGGTGCACAAACTCAAAAACTTATTCCTACTATGTTTATAATAAATAT
GATAATTATTCCCTTTCTCATAATAATTTTAAATAGTGTGAAGAGGGGAGGAAGGAAGAACGTTGAATAA

Upstream 100 bases:

>100_bases
AAGATTTATATATTAGGTTTCCAATAAAATATTTTAAAAGAAGACCTCGTTATCTAAAACCAAAAGATAAAATTAGACAG
AAATAAGTGTTTCTAAAGGG

Downstream 100 bases:

>100_bases
GAAAGTTTTCATAGGATTTTTTATAATTATTATAAGTTTTTTTATTAGTGGATGCTGGGATAAGGTAGAAATAGATAAGA
GAATATTTGTGTCTACTCTT

Product: spore germination protein A2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 369; Mature: 369

Protein sequence:

>369_residues
MIELKDKNIISSYGLFVTLVVTIIGVNVFSIPRDLATIVGVDGWVSIIIGGIITYVAAYLIYKCIQKSDYKDCYDIFQNS
FGKVLGNIVALSIVAYGLIFISVALRAFTEEIKLYLLKDTPTEFIFVVMILSGVYLVRAELEHLIRFNEISFWIMFIPIV
FVLLVSAYGVDFTNLLPVFKNKPLSYFKGSINVFYRFGGIGILFLIVPILKKKDKTPKVMKKSLLFISVFYIVIFILSIA
TFGEEQSKILLWPTITMISSIDIPGSFIQKWEGIVMAIWIMFYYTSFINYYYLSSDVLKNILKLDDIKLSSAILVPFIYI
IGLYPENVAQLGAQTQKLIPTMFIINMIIIPFLIIILNSVKRGGRKNVE

Sequences:

>Translated_369_residues
MIELKDKNIISSYGLFVTLVVTIIGVNVFSIPRDLATIVGVDGWVSIIIGGIITYVAAYLIYKCIQKSDYKDCYDIFQNS
FGKVLGNIVALSIVAYGLIFISVALRAFTEEIKLYLLKDTPTEFIFVVMILSGVYLVRAELEHLIRFNEISFWIMFIPIV
FVLLVSAYGVDFTNLLPVFKNKPLSYFKGSINVFYRFGGIGILFLIVPILKKKDKTPKVMKKSLLFISVFYIVIFILSIA
TFGEEQSKILLWPTITMISSIDIPGSFIQKWEGIVMAIWIMFYYTSFINYYYLSSDVLKNILKLDDIKLSSAILVPFIYI
IGLYPENVAQLGAQTQKLIPTMFIINMIIIPFLIIILNSVKRGGRKNVE
>Mature_369_residues
MIELKDKNIISSYGLFVTLVVTIIGVNVFSIPRDLATIVGVDGWVSIIIGGIITYVAAYLIYKCIQKSDYKDCYDIFQNS
FGKVLGNIVALSIVAYGLIFISVALRAFTEEIKLYLLKDTPTEFIFVVMILSGVYLVRAELEHLIRFNEISFWIMFIPIV
FVLLVSAYGVDFTNLLPVFKNKPLSYFKGSINVFYRFGGIGILFLIVPILKKKDKTPKVMKKSLLFISVFYIVIFILSIA
TFGEEQSKILLWPTITMISSIDIPGSFIQKWEGIVMAIWIMFYYTSFINYYYLSSDVLKNILKLDDIKLSSAILVPFIYI
IGLYPENVAQLGAQTQKLIPTMFIINMIIIPFLIIILNSVKRGGRKNVE

Specific function: Involved in the germinative response to L-alanine. Could be an amino acid transporter [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily. Spore germination protein (SGP) (TC 2.A.3.9) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002293
- InterPro:   IPR004761 [H]

Pfam domain/function: PF03845 Spore_permease [H]

EC number: NA

Molecular weight: Translated: 41931; Mature: 41931

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIELKDKNIISSYGLFVTLVVTIIGVNVFSIPRDLATIVGVDGWVSIIIGGIITYVAAYL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
IYKCIQKSDYKDCYDIFQNSFGKVLGNIVALSIVAYGLIFISVALRAFTEEIKLYLLKDT
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCC
PTEFIFVVMILSGVYLVRAELEHLIRFNEISFWIMFIPIVFVLLVSAYGVDFTNLLPVFK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHC
NKPLSYFKGSINVFYRFGGIGILFLIVPILKKKDKTPKVMKKSLLFISVFYIVIFILSIA
CCCHHHHCCCHHEEEEECHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
TFGEEQSKILLWPTITMISSIDIPGSFIQKWEGIVMAIWIMFYYTSFINYYYLSSDVLKN
HCCCCCCCEEEEEHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILKLDDIKLSSAILVPFIYIIGLYPENVAQLGAQTQKLIPTMFIINMIIIPFLIIILNSV
HHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KRGGRKNVE
HCCCCCCCC
>Mature Secondary Structure
MIELKDKNIISSYGLFVTLVVTIIGVNVFSIPRDLATIVGVDGWVSIIIGGIITYVAAYL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
IYKCIQKSDYKDCYDIFQNSFGKVLGNIVALSIVAYGLIFISVALRAFTEEIKLYLLKDT
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCC
PTEFIFVVMILSGVYLVRAELEHLIRFNEISFWIMFIPIVFVLLVSAYGVDFTNLLPVFK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHC
NKPLSYFKGSINVFYRFGGIGILFLIVPILKKKDKTPKVMKKSLLFISVFYIVIFILSIA
CCCHHHHCCCHHEEEEECHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
TFGEEQSKILLWPTITMISSIDIPGSFIQKWEGIVMAIWIMFYYTSFINYYYLSSDVLKN
HCCCCCCCEEEEEHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILKLDDIKLSSAILVPFIYIIGLYPENVAQLGAQTQKLIPTMFIINMIIIPFLIIILNSV
HHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KRGGRKNVE
HCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]