Definition Clostridium tetani E88 chromosome, complete genome.
Accession NC_004557
Length 2,799,251

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The map label for this gene is 28210014

Identifier: 28210014

GI number: 28210014

Start: 217089

End: 218405

Strand: Direct

Name: 28210014

Synonym: CTC00249

Alternate gene names: NA

Gene position: 217089-218405 (Clockwise)

Preceding gene: 28210013

Following gene: 28210015

Centisome position: 7.76

GC content: 27.71

Gene sequence:

>1317_bases
ATGAATAAATATATGGGGGTACATCAATTGGCACAAAAAAAGAATTATAGCAGGTATTTTATAATATTGCAGGAAGACGA
AAAAGGATATGCTTTGGCCTCTGACAAATTGCCTACTGGTTATGTTAAGCTAGAATTAAAGAATGACAAATGTAAAGTTT
CCTACTATGTACAGAACCTTAAAAAAGAAGATGCTCCTTATTACATGGTATTAATTTTAGGTAAAAAAGGAACTAATAAA
CTAATAAGAATAGGTGAACTGAACATAGATGATTATGGTAGAGCAGACGTATCCTACGAATATAACAGCGACGATATAGC
AAATACTCAATTGCCTATAGACAATATATCAGGGGCAGTAGTTGCAAAAATACTAGATAAAAACATAATACCTGTTTTAA
GTGGATTTTTAACAACAGACAATTTGAAGTGGAGAGAGTTTGAATTATTAGAATCAAGCGCTAATAAAGACAAAATTAAA
GCTGAAGAAAAGAAAGAAAAAGAGGCTAAAGAAGTTAAAAAAACTAAAGAAGAAATAAATGTATTTGATAAGTATGAAGA
ACAAATTGAAGATATCAAAGCAAAAGATGTCAAAGAAGAAAATAATAAAGCTAAACTACAAGAGACAGAAGTGGAAACAT
TTAAAAAATCGGAAGTTCAAGAAGAGGATATAAAAGTAGTGGACTTAGAAAAGGATACAAAAGTAGATGATTTAGAAGAT
GATGTAAAAGAAATAAAAACACAAAATAATCAGGAATATAAACCAAGAAAAGATTACTCGCAAGAAGTTAATAAAAAAGT
ATATGAAACTGTGGAAGATGAAAATAGTGAATCAGACAATAGAGAGAATGAAATATTTATAGCAGATACACATAATAATC
ATACTGATTATCCTACAGGAGAAACAGGAACGTTCTTTAGAGGCATAGCTAAAGATTTTAAAGATGTTTCTAATACAATA
GTGGATATAAAAAGATGTAAATGGTATAGAGTACCGGTAAATAGTATTATGGATATGTATTATATAGGAGATTATAATAA
ATATACTACGTTTTATTATCCTATGATTAATTATTATAAATATATTGAAGCATATAATCATTTTATAGTTGGATATAAAT
TTGATAATGAAGGAAAAATGAAATATTTAATATATGGTATACCAGGTACTAAGAAATTAAAGCATCAACCATTTAGAGGG
AAAACAGGATTTGTAACTTGGGTTCCTTCAAAATCTAAAGAAGATAATGTTAATGGATATTGGCTAATGTTTTATGATTT
CAAAAACTCTACTATATTAATTCCTTCAAAAAAATAG

Upstream 100 bases:

>100_bases
GAAGAATTCGCTATCTTATCCGATAGTTTGCATGAATTAATATAAAAATTTTTATTTTTAAGTTCTTGTTCACTTTTTGT
ATTAATACTCATATATTATA

Downstream 100 bases:

>100_bases
GTGTGCATTGCATACCTATTTTTTAATATTATTTAACCTTCTATCATATATTTAAGTATTAGAATTTTTAGGAGGTGAGT
CCCTTTTGAATAAGTCAATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 438; Mature: 438

Protein sequence:

>438_residues
MNKYMGVHQLAQKKNYSRYFIILQEDEKGYALASDKLPTGYVKLELKNDKCKVSYYVQNLKKEDAPYYMVLILGKKGTNK
LIRIGELNIDDYGRADVSYEYNSDDIANTQLPIDNISGAVVAKILDKNIIPVLSGFLTTDNLKWREFELLESSANKDKIK
AEEKKEKEAKEVKKTKEEINVFDKYEEQIEDIKAKDVKEENNKAKLQETEVETFKKSEVQEEDIKVVDLEKDTKVDDLED
DVKEIKTQNNQEYKPRKDYSQEVNKKVYETVEDENSESDNRENEIFIADTHNNHTDYPTGETGTFFRGIAKDFKDVSNTI
VDIKRCKWYRVPVNSIMDMYYIGDYNKYTTFYYPMINYYKYIEAYNHFIVGYKFDNEGKMKYLIYGIPGTKKLKHQPFRG
KTGFVTWVPSKSKEDNVNGYWLMFYDFKNSTILIPSKK

Sequences:

>Translated_438_residues
MNKYMGVHQLAQKKNYSRYFIILQEDEKGYALASDKLPTGYVKLELKNDKCKVSYYVQNLKKEDAPYYMVLILGKKGTNK
LIRIGELNIDDYGRADVSYEYNSDDIANTQLPIDNISGAVVAKILDKNIIPVLSGFLTTDNLKWREFELLESSANKDKIK
AEEKKEKEAKEVKKTKEEINVFDKYEEQIEDIKAKDVKEENNKAKLQETEVETFKKSEVQEEDIKVVDLEKDTKVDDLED
DVKEIKTQNNQEYKPRKDYSQEVNKKVYETVEDENSESDNRENEIFIADTHNNHTDYPTGETGTFFRGIAKDFKDVSNTI
VDIKRCKWYRVPVNSIMDMYYIGDYNKYTTFYYPMINYYKYIEAYNHFIVGYKFDNEGKMKYLIYGIPGTKKLKHQPFRG
KTGFVTWVPSKSKEDNVNGYWLMFYDFKNSTILIPSKK
>Mature_438_residues
MNKYMGVHQLAQKKNYSRYFIILQEDEKGYALASDKLPTGYVKLELKNDKCKVSYYVQNLKKEDAPYYMVLILGKKGTNK
LIRIGELNIDDYGRADVSYEYNSDDIANTQLPIDNISGAVVAKILDKNIIPVLSGFLTTDNLKWREFELLESSANKDKIK
AEEKKEKEAKEVKKTKEEINVFDKYEEQIEDIKAKDVKEENNKAKLQETEVETFKKSEVQEEDIKVVDLEKDTKVDDLED
DVKEIKTQNNQEYKPRKDYSQEVNKKVYETVEDENSESDNRENEIFIADTHNNHTDYPTGETGTFFRGIAKDFKDVSNTI
VDIKRCKWYRVPVNSIMDMYYIGDYNKYTTFYYPMINYYKYIEAYNHFIVGYKFDNEGKMKYLIYGIPGTKKLKHQPFRG
KTGFVTWVPSKSKEDNVNGYWLMFYDFKNSTILIPSKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51457; Mature: 51457

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: PS01159 WW_DOMAIN_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKYMGVHQLAQKKNYSRYFIILQEDEKGYALASDKLPTGYVKLELKNDKCKVSYYVQNL
CCCCCHHHHHHHHCCCCEEEEEEEECCCCCEEECCCCCCCEEEEEEECCCEEEEHHHHHH
KKEDAPYYMVLILGKKGTNKLIRIGELNIDDYGRADVSYEYNSDDIANTQLPIDNISGAV
HCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHH
VAKILDKNIIPVLSGFLTTDNLKWREFELLESSANKDKIKAEEKKEKEAKEVKKTKEEIN
HHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
VFDKYEEQIEDIKAKDVKEENNKAKLQETEVETFKKSEVQEEDIKVVDLEKDTKVDDLED
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHH
DVKEIKTQNNQEYKPRKDYSQEVNKKVYETVEDENSESDNRENEIFIADTHNNHTDYPTG
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCC
ETGTFFRGIAKDFKDVSNTIVDIKRCKWYRVPVNSIMDMYYIGDYNKYTTFYYPMINYYK
CCCHHHHHHHHHHHHHHHHHHHHHHCEEEECCHHHHHEEEEECCCCCEEEEEEHHHHHHH
YIEAYNHFIVGYKFDNEGKMKYLIYGIPGTKKLKHQPFRGKTGFVTWVPSKSKEDNVNGY
HHHHHCCEEEEEEECCCCCEEEEEEECCCCHHHCCCCCCCCCCEEEECCCCCCCCCCCEE
WLMFYDFKNSTILIPSKK
EEEEEEECCCEEEEECCC
>Mature Secondary Structure
MNKYMGVHQLAQKKNYSRYFIILQEDEKGYALASDKLPTGYVKLELKNDKCKVSYYVQNL
CCCCCHHHHHHHHCCCCEEEEEEEECCCCCEEECCCCCCCEEEEEEECCCEEEEHHHHHH
KKEDAPYYMVLILGKKGTNKLIRIGELNIDDYGRADVSYEYNSDDIANTQLPIDNISGAV
HCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHH
VAKILDKNIIPVLSGFLTTDNLKWREFELLESSANKDKIKAEEKKEKEAKEVKKTKEEIN
HHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
VFDKYEEQIEDIKAKDVKEENNKAKLQETEVETFKKSEVQEEDIKVVDLEKDTKVDDLED
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHH
DVKEIKTQNNQEYKPRKDYSQEVNKKVYETVEDENSESDNRENEIFIADTHNNHTDYPTG
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCC
ETGTFFRGIAKDFKDVSNTIVDIKRCKWYRVPVNSIMDMYYIGDYNKYTTFYYPMINYYK
CCCHHHHHHHHHHHHHHHHHHHHHHCEEEECCHHHHHEEEEECCCCCEEEEEEHHHHHHH
YIEAYNHFIVGYKFDNEGKMKYLIYGIPGTKKLKHQPFRGKTGFVTWVPSKSKEDNVNGY
HHHHHCCEEEEEEECCCCCEEEEEEECCCCHHHCCCCCCCCCCEEEECCCCCCCCCCCEE
WLMFYDFKNSTILIPSKK
EEEEEEECCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA