| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is 28210014
Identifier: 28210014
GI number: 28210014
Start: 217089
End: 218405
Strand: Direct
Name: 28210014
Synonym: CTC00249
Alternate gene names: NA
Gene position: 217089-218405 (Clockwise)
Preceding gene: 28210013
Following gene: 28210015
Centisome position: 7.76
GC content: 27.71
Gene sequence:
>1317_bases ATGAATAAATATATGGGGGTACATCAATTGGCACAAAAAAAGAATTATAGCAGGTATTTTATAATATTGCAGGAAGACGA AAAAGGATATGCTTTGGCCTCTGACAAATTGCCTACTGGTTATGTTAAGCTAGAATTAAAGAATGACAAATGTAAAGTTT CCTACTATGTACAGAACCTTAAAAAAGAAGATGCTCCTTATTACATGGTATTAATTTTAGGTAAAAAAGGAACTAATAAA CTAATAAGAATAGGTGAACTGAACATAGATGATTATGGTAGAGCAGACGTATCCTACGAATATAACAGCGACGATATAGC AAATACTCAATTGCCTATAGACAATATATCAGGGGCAGTAGTTGCAAAAATACTAGATAAAAACATAATACCTGTTTTAA GTGGATTTTTAACAACAGACAATTTGAAGTGGAGAGAGTTTGAATTATTAGAATCAAGCGCTAATAAAGACAAAATTAAA GCTGAAGAAAAGAAAGAAAAAGAGGCTAAAGAAGTTAAAAAAACTAAAGAAGAAATAAATGTATTTGATAAGTATGAAGA ACAAATTGAAGATATCAAAGCAAAAGATGTCAAAGAAGAAAATAATAAAGCTAAACTACAAGAGACAGAAGTGGAAACAT TTAAAAAATCGGAAGTTCAAGAAGAGGATATAAAAGTAGTGGACTTAGAAAAGGATACAAAAGTAGATGATTTAGAAGAT GATGTAAAAGAAATAAAAACACAAAATAATCAGGAATATAAACCAAGAAAAGATTACTCGCAAGAAGTTAATAAAAAAGT ATATGAAACTGTGGAAGATGAAAATAGTGAATCAGACAATAGAGAGAATGAAATATTTATAGCAGATACACATAATAATC ATACTGATTATCCTACAGGAGAAACAGGAACGTTCTTTAGAGGCATAGCTAAAGATTTTAAAGATGTTTCTAATACAATA GTGGATATAAAAAGATGTAAATGGTATAGAGTACCGGTAAATAGTATTATGGATATGTATTATATAGGAGATTATAATAA ATATACTACGTTTTATTATCCTATGATTAATTATTATAAATATATTGAAGCATATAATCATTTTATAGTTGGATATAAAT TTGATAATGAAGGAAAAATGAAATATTTAATATATGGTATACCAGGTACTAAGAAATTAAAGCATCAACCATTTAGAGGG AAAACAGGATTTGTAACTTGGGTTCCTTCAAAATCTAAAGAAGATAATGTTAATGGATATTGGCTAATGTTTTATGATTT CAAAAACTCTACTATATTAATTCCTTCAAAAAAATAG
Upstream 100 bases:
>100_bases GAAGAATTCGCTATCTTATCCGATAGTTTGCATGAATTAATATAAAAATTTTTATTTTTAAGTTCTTGTTCACTTTTTGT ATTAATACTCATATATTATA
Downstream 100 bases:
>100_bases GTGTGCATTGCATACCTATTTTTTAATATTATTTAACCTTCTATCATATATTTAAGTATTAGAATTTTTAGGAGGTGAGT CCCTTTTGAATAAGTCAATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 438; Mature: 438
Protein sequence:
>438_residues MNKYMGVHQLAQKKNYSRYFIILQEDEKGYALASDKLPTGYVKLELKNDKCKVSYYVQNLKKEDAPYYMVLILGKKGTNK LIRIGELNIDDYGRADVSYEYNSDDIANTQLPIDNISGAVVAKILDKNIIPVLSGFLTTDNLKWREFELLESSANKDKIK AEEKKEKEAKEVKKTKEEINVFDKYEEQIEDIKAKDVKEENNKAKLQETEVETFKKSEVQEEDIKVVDLEKDTKVDDLED DVKEIKTQNNQEYKPRKDYSQEVNKKVYETVEDENSESDNRENEIFIADTHNNHTDYPTGETGTFFRGIAKDFKDVSNTI VDIKRCKWYRVPVNSIMDMYYIGDYNKYTTFYYPMINYYKYIEAYNHFIVGYKFDNEGKMKYLIYGIPGTKKLKHQPFRG KTGFVTWVPSKSKEDNVNGYWLMFYDFKNSTILIPSKK
Sequences:
>Translated_438_residues MNKYMGVHQLAQKKNYSRYFIILQEDEKGYALASDKLPTGYVKLELKNDKCKVSYYVQNLKKEDAPYYMVLILGKKGTNK LIRIGELNIDDYGRADVSYEYNSDDIANTQLPIDNISGAVVAKILDKNIIPVLSGFLTTDNLKWREFELLESSANKDKIK AEEKKEKEAKEVKKTKEEINVFDKYEEQIEDIKAKDVKEENNKAKLQETEVETFKKSEVQEEDIKVVDLEKDTKVDDLED DVKEIKTQNNQEYKPRKDYSQEVNKKVYETVEDENSESDNRENEIFIADTHNNHTDYPTGETGTFFRGIAKDFKDVSNTI VDIKRCKWYRVPVNSIMDMYYIGDYNKYTTFYYPMINYYKYIEAYNHFIVGYKFDNEGKMKYLIYGIPGTKKLKHQPFRG KTGFVTWVPSKSKEDNVNGYWLMFYDFKNSTILIPSKK >Mature_438_residues MNKYMGVHQLAQKKNYSRYFIILQEDEKGYALASDKLPTGYVKLELKNDKCKVSYYVQNLKKEDAPYYMVLILGKKGTNK LIRIGELNIDDYGRADVSYEYNSDDIANTQLPIDNISGAVVAKILDKNIIPVLSGFLTTDNLKWREFELLESSANKDKIK AEEKKEKEAKEVKKTKEEINVFDKYEEQIEDIKAKDVKEENNKAKLQETEVETFKKSEVQEEDIKVVDLEKDTKVDDLED DVKEIKTQNNQEYKPRKDYSQEVNKKVYETVEDENSESDNRENEIFIADTHNNHTDYPTGETGTFFRGIAKDFKDVSNTI VDIKRCKWYRVPVNSIMDMYYIGDYNKYTTFYYPMINYYKYIEAYNHFIVGYKFDNEGKMKYLIYGIPGTKKLKHQPFRG KTGFVTWVPSKSKEDNVNGYWLMFYDFKNSTILIPSKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51457; Mature: 51457
Theoretical pI: Translated: 5.68; Mature: 5.68
Prosite motif: PS01159 WW_DOMAIN_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKYMGVHQLAQKKNYSRYFIILQEDEKGYALASDKLPTGYVKLELKNDKCKVSYYVQNL CCCCCHHHHHHHHCCCCEEEEEEEECCCCCEEECCCCCCCEEEEEEECCCEEEEHHHHHH KKEDAPYYMVLILGKKGTNKLIRIGELNIDDYGRADVSYEYNSDDIANTQLPIDNISGAV HCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHH VAKILDKNIIPVLSGFLTTDNLKWREFELLESSANKDKIKAEEKKEKEAKEVKKTKEEIN HHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH VFDKYEEQIEDIKAKDVKEENNKAKLQETEVETFKKSEVQEEDIKVVDLEKDTKVDDLED HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHH DVKEIKTQNNQEYKPRKDYSQEVNKKVYETVEDENSESDNRENEIFIADTHNNHTDYPTG HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCC ETGTFFRGIAKDFKDVSNTIVDIKRCKWYRVPVNSIMDMYYIGDYNKYTTFYYPMINYYK CCCHHHHHHHHHHHHHHHHHHHHHHCEEEECCHHHHHEEEEECCCCCEEEEEEHHHHHHH YIEAYNHFIVGYKFDNEGKMKYLIYGIPGTKKLKHQPFRGKTGFVTWVPSKSKEDNVNGY HHHHHCCEEEEEEECCCCCEEEEEEECCCCHHHCCCCCCCCCCEEEECCCCCCCCCCCEE WLMFYDFKNSTILIPSKK EEEEEEECCCEEEEECCC >Mature Secondary Structure MNKYMGVHQLAQKKNYSRYFIILQEDEKGYALASDKLPTGYVKLELKNDKCKVSYYVQNL CCCCCHHHHHHHHCCCCEEEEEEEECCCCCEEECCCCCCCEEEEEEECCCEEEEHHHHHH KKEDAPYYMVLILGKKGTNKLIRIGELNIDDYGRADVSYEYNSDDIANTQLPIDNISGAV HCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHH VAKILDKNIIPVLSGFLTTDNLKWREFELLESSANKDKIKAEEKKEKEAKEVKKTKEEIN HHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH VFDKYEEQIEDIKAKDVKEENNKAKLQETEVETFKKSEVQEEDIKVVDLEKDTKVDDLED HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHH DVKEIKTQNNQEYKPRKDYSQEVNKKVYETVEDENSESDNRENEIFIADTHNNHTDYPTG HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCC ETGTFFRGIAKDFKDVSNTIVDIKRCKWYRVPVNSIMDMYYIGDYNKYTTFYYPMINYYK CCCHHHHHHHHHHHHHHHHHHHHHHCEEEECCHHHHHEEEEECCCCCEEEEEEHHHHHHH YIEAYNHFIVGYKFDNEGKMKYLIYGIPGTKKLKHQPFRGKTGFVTWVPSKSKEDNVNGY HHHHHCCEEEEEEECCCCCEEEEEEECCCCHHHCCCCCCCCCCEEEECCCCCCCCCCCEE WLMFYDFKNSTILIPSKK EEEEEEECCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA