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The map label for this gene is 28199960

Identifier: 28199960

GI number: 28199960

Start: 2491945

End: 2492253

Strand: Reverse

Name: 28199960

Synonym: PD2104

Alternate gene names: NA

Gene position: 2492253-2491945 (Counterclockwise)

Preceding gene: 28199961

Following gene: 28199958

Centisome position: 98.91

GC content: 52.75

Gene sequence:

>309_bases
GTGACCATCACAAAGAAAATCAATGTCTCCGAACTGCCAGAGTTCGATGCCGCCGAATACCTGAACAGCGAAGAGGAGGT
AGCCGCGTATCTCACGGCTGTTCTTGAAGAAAACGATCCAGCACTGTTAGCGGCTGCGCTTGGTGACATTGCCCGTTCAC
GTGGTATGTCTCAGATTGCGAAGGATTCTGGCATCACGCGGGAAGCTCTATACAAGGCCCTTCGGCCTGGTAGTGAACCA
CGCTTCGATACGATAAGCCGCGTCTGTACCGCCCTAGGTATACGTCTAGTAGCGCAACCAATGCATTGA

Upstream 100 bases:

>100_bases
CAGCTTTCTCATCGTGATGCTCGGCGGCGGCGACAAGTCAACGCAGCAATCAGACATTCGTCGGGCCATTGAGCTAGCAA
AATCTTTAGAGGATTGACCC

Downstream 100 bases:

>100_bases
CACCGACTCTTTGCGCTCCTGATCCTGCCTTTGGACAGACTGGCTAGAGAGGTAATAGGCTAAGACGATCCCCTCAAAAC
GCCACAGCACTACCGGTATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 102; Mature: 101

Protein sequence:

>102_residues
MTITKKINVSELPEFDAAEYLNSEEEVAAYLTAVLEENDPALLAAALGDIARSRGMSQIAKDSGITREALYKALRPGSEP
RFDTISRVCTALGIRLVAQPMH

Sequences:

>Translated_102_residues
MTITKKINVSELPEFDAAEYLNSEEEVAAYLTAVLEENDPALLAAALGDIARSRGMSQIAKDSGITREALYKALRPGSEP
RFDTISRVCTALGIRLVAQPMH
>Mature_101_residues
TITKKINVSELPEFDAAEYLNSEEEVAAYLTAVLEENDPALLAAALGDIARSRGMSQIAKDSGITREALYKALRPGSEPR
FDTISRVCTALGIRLVAQPMH

Specific function: Unknown

COG id: COG3636

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014057
- InterPro:   IPR001387 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 11093; Mature: 10962

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTITKKINVSELPEFDAAEYLNSEEEVAAYLTAVLEENDPALLAAALGDIARSRGMSQIA
CCCCCCCCHHHCCCCCHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHH
KDSGITREALYKALRPGSEPRFDTISRVCTALGIRLVAQPMH
HHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TITKKINVSELPEFDAAEYLNSEEEVAAYLTAVLEENDPALLAAALGDIARSRGMSQIA
CCCCCCCHHHCCCCCHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHH
KDSGITREALYKALRPGSEPRFDTISRVCTALGIRLVAQPMH
HHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]