Click here to switch to the map view.

The map label for this gene is 28199944

Identifier: 28199944

GI number: 28199944

Start: 2473322

End: 2474110

Strand: Reverse

Name: 28199944

Synonym: PD2084

Alternate gene names: NA

Gene position: 2474110-2473322 (Counterclockwise)

Preceding gene: 28199945

Following gene: 28199943

Centisome position: 98.19

GC content: 53.11

Gene sequence:

>789_bases
ATGATGGCCGGACCTAAGGAGAGCCGCGATCTGACCCTGGAACAATTTCAGGTGAATTTTTTAGATCAGTACACCATCAA
GCATGCCTTTATCAATGGCGTCAACATCTACCGCTGTTATCCAGGCGCACCGCCCAACAATGTGCAGATGGTGATGCAAC
GCAGTCATGGAACAGAGGTCCCGGGAATCATGGTTAACCTGGAAGGTCAACAGCCGACGGTTGTTCCACTGGATGCCTCT
ATCATCGGTGCCAAGAAGCTGACTCCCACCACCACGCGCCCTTTGCATAACGTCAGGGTGTTGAGAGTGAATGCGGTGAT
GAGATTTCATCCGCTGTGCAGGGCGCGGTTTGTGGGACCCAACGACATCAGTTTCGGCATCCGCAGCGCCACCAGCCAAA
GTATCCAGGAGCATATTCAGGAACTAACGGATCTGATGAAAAAAACTCAGCAAGCCGATGAGCAAGCCATGGGTGCGCTC
TATAGCCGCAGTAGTGCCCTCGTATCCAAACTTAAAATGAGTGGGGCCACATCCAACGTTGCTTTTCTGGAGGTCCCACA
GACCGAGACGCGCTGGGGTAATCCCTGGACCTGGTACCGCGCGTATCTTCCGACCCCGCTGGGTGATGGCGTGGAAACCT
GGATGACCCCGATCGGCGATAGCGGCTACTACATCACGGTGGATTTCAACTTTACTGAGTCAGAACGTCAAAAAAACACC
GAGAATTACCAGCGTGCCCGTCAATTGATGGACAGCGTGTTGCAATCAGTGGTCATTCAAAAGCGGTGA

Upstream 100 bases:

>100_bases
ATTGCGAATCCCACTGTGTGTATCAATCTGTGTTGCCGGCCTACTGTTGTCGGCTTGCAGCACCGCTCCTGTGATCGACT
CGGATACCGGCAAGCCGATC

Downstream 100 bases:

>100_bases
GCGCTGTCCAGCAGCAGTGTCCCCCGACAATGGTTGCCGCCGGATTGCGATTGCCTCGCATGCGCGCGTGTTGCAAACAC
TGACCACACGCGGCAATCCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MMAGPKESRDLTLEQFQVNFLDQYTIKHAFINGVNIYRCYPGAPPNNVQMVMQRSHGTEVPGIMVNLEGQQPTVVPLDAS
IIGAKKLTPTTTRPLHNVRVLRVNAVMRFHPLCRARFVGPNDISFGIRSATSQSIQEHIQELTDLMKKTQQADEQAMGAL
YSRSSALVSKLKMSGATSNVAFLEVPQTETRWGNPWTWYRAYLPTPLGDGVETWMTPIGDSGYYITVDFNFTESERQKNT
ENYQRARQLMDSVLQSVVIQKR

Sequences:

>Translated_262_residues
MMAGPKESRDLTLEQFQVNFLDQYTIKHAFINGVNIYRCYPGAPPNNVQMVMQRSHGTEVPGIMVNLEGQQPTVVPLDAS
IIGAKKLTPTTTRPLHNVRVLRVNAVMRFHPLCRARFVGPNDISFGIRSATSQSIQEHIQELTDLMKKTQQADEQAMGAL
YSRSSALVSKLKMSGATSNVAFLEVPQTETRWGNPWTWYRAYLPTPLGDGVETWMTPIGDSGYYITVDFNFTESERQKNT
ENYQRARQLMDSVLQSVVIQKR
>Mature_262_residues
MMAGPKESRDLTLEQFQVNFLDQYTIKHAFINGVNIYRCYPGAPPNNVQMVMQRSHGTEVPGIMVNLEGQQPTVVPLDAS
IIGAKKLTPTTTRPLHNVRVLRVNAVMRFHPLCRARFVGPNDISFGIRSATSQSIQEHIQELTDLMKKTQQADEQAMGAL
YSRSSALVSKLKMSGATSNVAFLEVPQTETRWGNPWTWYRAYLPTPLGDGVETWMTPIGDSGYYITVDFNFTESERQKNT
ENYQRARQLMDSVLQSVVIQKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29600; Mature: 29600

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMAGPKESRDLTLEQFQVNFLDQYTIKHAFINGVNIYRCYPGAPPNNVQMVMQRSHGTEV
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHEECCCCCCC
PGIMVNLEGQQPTVVPLDASIIGAKKLTPTTTRPLHNVRVLRVNAVMRFHPLCRARFVGP
CEEEEEECCCCCEEEEECCCEECCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHCCCCC
NDISFGIRSATSQSIQEHIQELTDLMKKTQQADEQAMGALYSRSSALVSKLKMSGATSNV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE
AFLEVPQTETRWGNPWTWYRAYLPTPLGDGVETWMTPIGDSGYYITVDFNFTESERQKNT
EEEECCCCCCCCCCCCEEEEEECCCCCCCCHHHHHCCCCCCCEEEEEEECCCHHHHHCCH
ENYQRARQLMDSVLQSVVIQKR
HHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MMAGPKESRDLTLEQFQVNFLDQYTIKHAFINGVNIYRCYPGAPPNNVQMVMQRSHGTEV
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHEECCCCCCC
PGIMVNLEGQQPTVVPLDASIIGAKKLTPTTTRPLHNVRVLRVNAVMRFHPLCRARFVGP
CEEEEEECCCCCEEEEECCCEECCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHCCCCC
NDISFGIRSATSQSIQEHIQELTDLMKKTQQADEQAMGALYSRSSALVSKLKMSGATSNV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE
AFLEVPQTETRWGNPWTWYRAYLPTPLGDGVETWMTPIGDSGYYITVDFNFTESERQKNT
EEEECCCCCCCCCCCCEEEEEECCCCCCCCHHHHHCCCCCCCEEEEEEECCCHHHHHCCH
ENYQRARQLMDSVLQSVVIQKR
HHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA