Click here to switch to the map view.

The map label for this gene is yjeF [H]

Identifier: 28199768

GI number: 28199768

Start: 2227948

End: 2229438

Strand: Reverse

Name: yjeF [H]

Synonym: PD1900

Alternate gene names: 28199768

Gene position: 2229438-2227948 (Counterclockwise)

Preceding gene: 77747716

Following gene: 28199767

Centisome position: 88.48

GC content: 62.04

Gene sequence:

>1491_bases
ATGTCTGCTCCTTTTGCGCTCTATGACACTGCCGCTGCAGCTGCGCTTGATGCACGGCTGGCCGCGCACTTGGGTGATGA
TGGTGATCTGTTGATGCAGTGCGCTGGCCGTGCTGCATGGGATCTGTTGCGCCAGCGTTGGCCAGATGCCCGTCAGGTGC
TGGTGGCATGCGGTACTGGCAACAATGGCGGCGACGGCTATGTACTCGCCTGCTTGGCGCACCGCGCCGGCTTGCAGGTA
CAGGTGGTGCACTTGCCCGGGTGTGGTCCGGCGTCGTTGCTGGCGCAGCGTGCTTATGATGCGTACCTTGCCGCAGGTGG
TCAGGTGATGCTGTTCTCAGGGGTACTCGAGACGGCGGATGTCTTGGTGGATGCCCTGTTTGGCATTGGTTTGAATCGAC
CCTTGGACGTGCCGACGCAAGGTTTAATCAATGCACTGAATGCGGCTGGTCGGCCGGTGTTGGCGTTAGACGTTCCTAGT
GGCGTTGATGCCGAACGTGGCGCTGTATTTGGTACGCCCGTATGCGCGCATGTCACGCTGCAATTCATGGTGCCTCATGT
GGGTTTGTATACAGGCCCAGCATTGGATGCCGTGGGCGAGCGTGTACTGGCTGCGCTTGATGTGCCGCCAGCACTACGGG
ATGCGCTGCCACCTTGTGCTGAGCGATGGGGGCCACAGAGACTGGCATCCCTGTTCCGTTCGCGGCGTCGTAACAGCCAC
AAAGGTGAGTTTGGGCGTGTGTTGTGTGTGGGCGGTAATTGGGGGAGCGGTGGAGCAATCATGTTGAGTGCCGAGGCCGC
ATTGCGCAGTGGTGCCGGTGTGGTACACGTGGCGACGCGTGAAGCACATGTTGCCCCCTTGCTGGCGCGTTGTCCGGAGA
CAATGCCGCGCGGTGTTGCCGGAAGTGCCGAGCTGATGCCGTTGTTGACCGCAGCCGATGTTGTTGCGCTTGGGCCGGGG
TTAGGACAGGACTCGTGGGGCCAAGCGTTATTGGCAGCCACCCTCGACAGTGGGTGTGCCCTGGTGATTGATGCCGATGC
CTTGAATGTGTTGGCTGCGGCGCCAGGTCCCCTGCCACCTGGTGCAATCTTGACGCCGCATCCGGGCGAGGCCGGCCGTT
TGCTTGGCTGCACGACGGCTCAGGTGCAGGCGGATCGTCGCGCAGCTGCGCAGGCCTTGGCGGCGCGTTTTGCTGCTGTG
GTGGTGCTGAAGGGGGCGGGCAGTCTTATTGCCGCGCCGGGTTGCTTACCGTGCGTGATTGATGCCGGTAATCCCGGCAT
GGCGGTTGCTGGGATGGGTGACGTACTCACTGGTGTCATTGCCGCGTTGCGTGCCCAAGGCGAGAGCGCGTTCGATGCGG
CATTATTTGGCGCGTTGTTGCATGCTGCTGCTGGTGACCAGGTGGCGCGTGATGGGGGGGAACGTGGTTTGCTGCCTAGC
GATGTCCTGCCGGTACTACGTCGTTTGATCAACCCGGATTCTGCGCCGTGA

Upstream 100 bases:

>100_bases
TGGAAGCTGGCCACAGGCGCGTACCCATCTGGAAAAACACTGGATATCGCATCCTTGCACGTCAGTGTGACAACCATACC
TACAGAGATAAAATTTCCAC

Downstream 100 bases:

>100_bases
TCGAATTTCAACTCACTGATGTTGCTGCGACTGAGCGTTTGGGCATGGTGTTAGCCCACAGTCGGCCGCTACCTGCCGTG
TTGTCTCTACAAGGTGATAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 496; Mature: 495

Protein sequence:

>496_residues
MSAPFALYDTAAAAALDARLAAHLGDDGDLLMQCAGRAAWDLLRQRWPDARQVLVACGTGNNGGDGYVLACLAHRAGLQV
QVVHLPGCGPASLLAQRAYDAYLAAGGQVMLFSGVLETADVLVDALFGIGLNRPLDVPTQGLINALNAAGRPVLALDVPS
GVDAERGAVFGTPVCAHVTLQFMVPHVGLYTGPALDAVGERVLAALDVPPALRDALPPCAERWGPQRLASLFRSRRRNSH
KGEFGRVLCVGGNWGSGGAIMLSAEAALRSGAGVVHVATREAHVAPLLARCPETMPRGVAGSAELMPLLTAADVVALGPG
LGQDSWGQALLAATLDSGCALVIDADALNVLAAAPGPLPPGAILTPHPGEAGRLLGCTTAQVQADRRAAAQALAARFAAV
VVLKGAGSLIAAPGCLPCVIDAGNPGMAVAGMGDVLTGVIAALRAQGESAFDAALFGALLHAAAGDQVARDGGERGLLPS
DVLPVLRRLINPDSAP

Sequences:

>Translated_496_residues
MSAPFALYDTAAAAALDARLAAHLGDDGDLLMQCAGRAAWDLLRQRWPDARQVLVACGTGNNGGDGYVLACLAHRAGLQV
QVVHLPGCGPASLLAQRAYDAYLAAGGQVMLFSGVLETADVLVDALFGIGLNRPLDVPTQGLINALNAAGRPVLALDVPS
GVDAERGAVFGTPVCAHVTLQFMVPHVGLYTGPALDAVGERVLAALDVPPALRDALPPCAERWGPQRLASLFRSRRRNSH
KGEFGRVLCVGGNWGSGGAIMLSAEAALRSGAGVVHVATREAHVAPLLARCPETMPRGVAGSAELMPLLTAADVVALGPG
LGQDSWGQALLAATLDSGCALVIDADALNVLAAAPGPLPPGAILTPHPGEAGRLLGCTTAQVQADRRAAAQALAARFAAV
VVLKGAGSLIAAPGCLPCVIDAGNPGMAVAGMGDVLTGVIAALRAQGESAFDAALFGALLHAAAGDQVARDGGERGLLPS
DVLPVLRRLINPDSAP
>Mature_495_residues
SAPFALYDTAAAAALDARLAAHLGDDGDLLMQCAGRAAWDLLRQRWPDARQVLVACGTGNNGGDGYVLACLAHRAGLQVQ
VVHLPGCGPASLLAQRAYDAYLAAGGQVMLFSGVLETADVLVDALFGIGLNRPLDVPTQGLINALNAAGRPVLALDVPSG
VDAERGAVFGTPVCAHVTLQFMVPHVGLYTGPALDAVGERVLAALDVPPALRDALPPCAERWGPQRLASLFRSRRRNSHK
GEFGRVLCVGGNWGSGGAIMLSAEAALRSGAGVVHVATREAHVAPLLARCPETMPRGVAGSAELMPLLTAADVVALGPGL
GQDSWGQALLAATLDSGCALVIDADALNVLAAAPGPLPPGAILTPHPGEAGRLLGCTTAQVQADRRAAAQALAARFAAVV
VLKGAGSLIAAPGCLPCVIDAGNPGMAVAGMGDVLTGVIAALRAQGESAFDAALFGALLHAAAGDQVARDGGERGLLPSD
VLPVLRRLINPDSAP

Specific function: Unknown

COG id: COG0063

COG function: function code G; Predicted sugar kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 YjeF N-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1790609, Length=464, Percent_Identity=42.4568965517241, Blast_Score=324, Evalue=6e-90,
Organism=Caenorhabditis elegans, GI17509719, Length=188, Percent_Identity=29.7872340425532, Blast_Score=70, Evalue=3e-12,
Organism=Drosophila melanogaster, GI21357759, Length=204, Percent_Identity=30.8823529411765, Blast_Score=72, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017953
- InterPro:   IPR000631
- InterPro:   IPR004443 [H]

Pfam domain/function: PF01256 Carb_kinase; PF03853 YjeF_N [H]

EC number: NA

Molecular weight: Translated: 50194; Mature: 50063

Theoretical pI: Translated: 5.99; Mature: 5.99

Prosite motif: PS01049 UPF0031_1 ; PS01050 UPF0031_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAPFALYDTAAAAALDARLAAHLGDDGDLLMQCAGRAAWDLLRQRWPDARQVLVACGTG
CCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC
NNGGDGYVLACLAHRAGLQVQVVHLPGCGPASLLAQRAYDAYLAAGGQVMLFSGVLETAD
CCCCCCCEEEEEHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHH
VLVDALFGIGLNRPLDVPTQGLINALNAAGRPVLALDVPSGVDAERGAVFGTPVCAHVTL
HHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEECCCHHHHHHH
QFMVPHVGLYTGPALDAVGERVLAALDVPPALRDALPPCAERWGPQRLASLFRSRRRNSH
HHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHCCCHHHHHCCHHHHHHHHHHHCCCCC
KGEFGRVLCVGGNWGSGGAIMLSAEAALRSGAGVVHVATREAHVAPLLARCPETMPRGVA
CCCCCEEEEEECCCCCCCEEEEEEHHHHHCCCCEEEEECCCHHHHHHHHHCCHHCCCCCC
GSAELMPLLTAADVVALGPGLGQDSWGQALLAATLDSGCALVIDADALNVLAAAPGPLPP
CCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEEEECCHHHHHCCCCCCCCC
GAILTPHPGEAGRLLGCTTAQVQADRRAAAQALAARFAAVVVLKGAGSLIAAPGCLPCVI
CCEECCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEECCCCCEEEE
DAGNPGMAVAGMGDVLTGVIAALRAQGESAFDAALFGALLHAAAGDQVARDGGERGLLPS
ECCCCCEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCH
DVLPVLRRLINPDSAP
HHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SAPFALYDTAAAAALDARLAAHLGDDGDLLMQCAGRAAWDLLRQRWPDARQVLVACGTG
CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC
NNGGDGYVLACLAHRAGLQVQVVHLPGCGPASLLAQRAYDAYLAAGGQVMLFSGVLETAD
CCCCCCCEEEEEHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHH
VLVDALFGIGLNRPLDVPTQGLINALNAAGRPVLALDVPSGVDAERGAVFGTPVCAHVTL
HHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEECCCHHHHHHH
QFMVPHVGLYTGPALDAVGERVLAALDVPPALRDALPPCAERWGPQRLASLFRSRRRNSH
HHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHCCCHHHHHCCHHHHHHHHHHHCCCCC
KGEFGRVLCVGGNWGSGGAIMLSAEAALRSGAGVVHVATREAHVAPLLARCPETMPRGVA
CCCCCEEEEEECCCCCCCEEEEEEHHHHHCCCCEEEEECCCHHHHHHHHHCCHHCCCCCC
GSAELMPLLTAADVVALGPGLGQDSWGQALLAATLDSGCALVIDADALNVLAAAPGPLPP
CCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEEEECCHHHHHCCCCCCCCC
GAILTPHPGEAGRLLGCTTAQVQADRRAAAQALAARFAAVVVLKGAGSLIAAPGCLPCVI
CCEECCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEECCCCCEEEE
DAGNPGMAVAGMGDVLTGVIAALRAQGESAFDAALFGALLHAAAGDQVARDGGERGLLPS
ECCCCCEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCH
DVLPVLRRLINPDSAP
HHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 7511774 [H]