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The map label for this gene is 28199490

Identifier: 28199490

GI number: 28199490

Start: 1866689

End: 1867939

Strand: Reverse

Name: 28199490

Synonym: PD1613

Alternate gene names: NA

Gene position: 1867939-1866689 (Counterclockwise)

Preceding gene: 28199491

Following gene: 28199489

Centisome position: 74.13

GC content: 50.92

Gene sequence:

>1251_bases
ATGTATTCCTCACGCTTAGCGCGTCTTCGCATCAGTGGACTTTCGTTGATGGAACTGCTGATCGCACTGTTGATTGGTTC
CATACTCATTGTGGGGGTGATCCAGGTATTTCTTGCGTCATGGACTGCTTACCGTCTTTCCCAAGGGATCGCGCGTAATC
AGGAAAGCGGTCGTTTCGCACTGGATTTTCTGACACGGGATATCCGCATGGCTGGTCATACCGGATGTATCAATGATCAA
GCGCTGTTGTCTGTTGATGATGGCGGACACCCGAATGGAGGAAATATCCGTTCGTTGTTTCTCAATGCGGATGATCGCAA
TACCAACAATGTTTCTAATCAGCCATTCCCGCTGCGTTTCGATATTGCGATTGAGGGATTTGATGCCTCTGGGACAGGAA
GAGGTAGCCTGCTGTCGCTTGGTGCTGTCCCTGTCGTCGGTAGTGCGTCTGATTGGAATCCAGTGTTGCCGGCTGAACTT
ACGGCTCTGAAACCGATCAAGGGAAGTGATGTTCTGGTACTGCGTTATCTTTCCGCTGAGGAAAACATAGTGACGGATTT
CAATCCAACGTCCAGCCCTACCATCATTTATACAGATGAGTCGGTTCATGGGAGCAGTAAAGTCGCGACCGGTGGTAGTG
GCCTGTATGCGATTGCCGATTGTAATGGGGCCAGTGTCTTCCAGGCGAGTACTGCGCCGACGATGACCAGTATGAATGTC
AGTGCTGGCGGTCTGAATAAGACGGCGCTTGATTTCGTCGGTTATTACGATCGTTCGCTGTCGTTTTTCCCAGAGAGTTT
GGCGTTGTTTCGTGCCGAATCGATTGCTTATTACATTGGTTTGAACGAGCGCGGGATTCCATCACTGTATCGTGCCCGTT
GGACTTCGGCGCCTGCGGCGGTTGCCTTGGTTACCAATGTTCAGGAGTTGGTTGAGGGAGTGGAGTCCTTGCAATTTCTT
TATGGTGAAGATTCGGCAGTGTTGAGCAAAACGATATCAAGTGGCTATATCGATCATACGAATCCAGCAAACATCATCGG
TGATGTGGATAACGCGCTGCGTTGGCGTCGGATTGGTACGGTGCAGATCGGGCTGTTGGTGCGTGGTGCTGGGCAAGAAC
GGGCCAATTCTCTGAATCCGGTAGTGAATCCGACGGTGCTATCTGTACATATCAATCCGCCATCGGATGGTCAATACCGG
GCGGTGTACGAGACAACCGTCGCTTTACGCAATCGCTTATACGGGAACTGA

Upstream 100 bases:

>100_bases
ATGGGGAAGTGACGGTGACGATCCGTTGGGGTGATCAACACTGGGAGACCGATGTGAATAAGCAATCCACCACTTTCAAT
CTGACTAGTGTGTTATGACG

Downstream 100 bases:

>100_bases
TGATGAAGTTACGGGCATTTGTCGATTCGCTGCTTCGAGGTCGCGCACGTTCCCAGCAGGGAGCTGTTTTATATGTTGTG
CTGGTGGTGTTGGTGCTATT

Product: hypothetical protein

Products: NA

Alternate protein names: PilW-Related Protein; Prepilin-Type Cleavage/Methylation-Like; Type 4 Fimbrial Biogenesis Protein PilW

Number of amino acids: Translated: 416; Mature: 416

Protein sequence:

>416_residues
MYSSRLARLRISGLSLMELLIALLIGSILIVGVIQVFLASWTAYRLSQGIARNQESGRFALDFLTRDIRMAGHTGCINDQ
ALLSVDDGGHPNGGNIRSLFLNADDRNTNNVSNQPFPLRFDIAIEGFDASGTGRGSLLSLGAVPVVGSASDWNPVLPAEL
TALKPIKGSDVLVLRYLSAEENIVTDFNPTSSPTIIYTDESVHGSSKVATGGSGLYAIADCNGASVFQASTAPTMTSMNV
SAGGLNKTALDFVGYYDRSLSFFPESLALFRAESIAYYIGLNERGIPSLYRARWTSAPAAVALVTNVQELVEGVESLQFL
YGEDSAVLSKTISSGYIDHTNPANIIGDVDNALRWRRIGTVQIGLLVRGAGQERANSLNPVVNPTVLSVHINPPSDGQYR
AVYETTVALRNRLYGN

Sequences:

>Translated_416_residues
MYSSRLARLRISGLSLMELLIALLIGSILIVGVIQVFLASWTAYRLSQGIARNQESGRFALDFLTRDIRMAGHTGCINDQ
ALLSVDDGGHPNGGNIRSLFLNADDRNTNNVSNQPFPLRFDIAIEGFDASGTGRGSLLSLGAVPVVGSASDWNPVLPAEL
TALKPIKGSDVLVLRYLSAEENIVTDFNPTSSPTIIYTDESVHGSSKVATGGSGLYAIADCNGASVFQASTAPTMTSMNV
SAGGLNKTALDFVGYYDRSLSFFPESLALFRAESIAYYIGLNERGIPSLYRARWTSAPAAVALVTNVQELVEGVESLQFL
YGEDSAVLSKTISSGYIDHTNPANIIGDVDNALRWRRIGTVQIGLLVRGAGQERANSLNPVVNPTVLSVHINPPSDGQYR
AVYETTVALRNRLYGN
>Mature_416_residues
MYSSRLARLRISGLSLMELLIALLIGSILIVGVIQVFLASWTAYRLSQGIARNQESGRFALDFLTRDIRMAGHTGCINDQ
ALLSVDDGGHPNGGNIRSLFLNADDRNTNNVSNQPFPLRFDIAIEGFDASGTGRGSLLSLGAVPVVGSASDWNPVLPAEL
TALKPIKGSDVLVLRYLSAEENIVTDFNPTSSPTIIYTDESVHGSSKVATGGSGLYAIADCNGASVFQASTAPTMTSMNV
SAGGLNKTALDFVGYYDRSLSFFPESLALFRAESIAYYIGLNERGIPSLYRARWTSAPAAVALVTNVQELVEGVESLQFL
YGEDSAVLSKTISSGYIDHTNPANIIGDVDNALRWRRIGTVQIGLLVRGAGQERANSLNPVVNPTVLSVHINPPSDGQYR
AVYETTVALRNRLYGN

Specific function: Unknown

COG id: COG4966

COG function: function code NU; Tfp pilus assembly protein PilW

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44597; Mature: 44597

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYSSRLARLRISGLSLMELLIALLIGSILIVGVIQVFLASWTAYRLSQGIARNQESGRFA
CCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE
LDFLTRDIRMAGHTGCINDQALLSVDDGGHPNGGNIRSLFLNADDRNTNNVSNQPFPLRF
EEHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEE
DIAIEGFDASGTGRGSLLSLGAVPVVGSASDWNPVLPAELTALKPIKGSDVLVLRYLSAE
EEEEECCCCCCCCCCCEEEECCEEEECCCCCCCCCCCCHHHEECCCCCCCEEEEEEECCC
ENIVTDFNPTSSPTIIYTDESVHGSSKVATGGSGLYAIADCNGASVFQASTAPTMTSMNV
CCEEECCCCCCCCEEEEECCCCCCCCCEECCCCCEEEEEECCCCEEEECCCCCCEEEEEC
SAGGLNKTALDFVGYYDRSLSFFPESLALFRAESIAYYIGLNERGIPSLYRARWTSAPAA
CCCCCCHHHHHHHHHHCCCHHHCHHHHHHHHHCEEEEEEECCCCCCCHHHHHHCCCCCHH
VALVTNVQELVEGVESLQFLYGEDSAVLSKTISSGYIDHTNPANIIGDVDNALRWRRIGT
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHCCCCHHHHHEEECCE
VQIGLLVRGAGQERANSLNPVVNPTVLSVHINPPSDGQYRAVYETTVALRNRLYGN
EEEEEEEECCCHHHHCCCCCCCCCEEEEEEECCCCCCCEEEHHHHHHHHHHHHCCC
>Mature Secondary Structure
MYSSRLARLRISGLSLMELLIALLIGSILIVGVIQVFLASWTAYRLSQGIARNQESGRFA
CCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE
LDFLTRDIRMAGHTGCINDQALLSVDDGGHPNGGNIRSLFLNADDRNTNNVSNQPFPLRF
EEHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEE
DIAIEGFDASGTGRGSLLSLGAVPVVGSASDWNPVLPAELTALKPIKGSDVLVLRYLSAE
EEEEECCCCCCCCCCCEEEECCEEEECCCCCCCCCCCCHHHEECCCCCCCEEEEEEECCC
ENIVTDFNPTSSPTIIYTDESVHGSSKVATGGSGLYAIADCNGASVFQASTAPTMTSMNV
CCEEECCCCCCCCEEEEECCCCCCCCCEECCCCCEEEEEECCCCEEEECCCCCCEEEEEC
SAGGLNKTALDFVGYYDRSLSFFPESLALFRAESIAYYIGLNERGIPSLYRARWTSAPAA
CCCCCCHHHHHHHHHHCCCHHHCHHHHHHHHHCEEEEEEECCCCCCCHHHHHHCCCCCHH
VALVTNVQELVEGVESLQFLYGEDSAVLSKTISSGYIDHTNPANIIGDVDNALRWRRIGT
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHCCCCHHHHHEEECCE
VQIGLLVRGAGQERANSLNPVVNPTVLSVHINPPSDGQYRAVYETTVALRNRLYGN
EEEEEEEECCCHHHHCCCCCCCCCEEEEEEECCCCCCCEEEHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA