| Definition | Xylella fastidiosa Temecula1, complete genome. |
|---|---|
| Accession | NC_004556 |
| Length | 2,519,802 |
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The map label for this gene is 28199473
Identifier: 28199473
GI number: 28199473
Start: 1847376
End: 1847810
Strand: Reverse
Name: 28199473
Synonym: PD1594
Alternate gene names: NA
Gene position: 1847810-1847376 (Counterclockwise)
Preceding gene: 28199474
Following gene: 28199472
Centisome position: 73.33
GC content: 55.86
Gene sequence:
>435_bases GTGGCCTGGTGTTGCGCCGTGTCGATGAACGCGCCCTGTGCGAAGGAAGGGCCTCGTGATGACCTTTCCCCCCTTCTTGC TCATCGTTGCATTACTGCTGTGGATCAGCCGCCGCAGCAGTCACTCACAACAGGATTGCCACCGATGAAAACATCAGACG TATCCGCATTATTCGCGTACTTAGTGATTGCAGTGTCATTGTCCCTCGCATCGTGCACGAGCTTAGCGCCGTCCGGGATA CTGCCAACAACGCGCTCAGAAGCGGTCTGCGACCGACTCCCCCCCCTGCCAGTACCGCCGATTTCAAATGAACAACCAGA GATCTTCGCCATTTTCCGCAGAGTGATCGGTTTGTACATCAACGAAATCAACAAATACAACGCCCAGGTCGCTTGCCGTG CTCAAGTGCACGCGACCCATCAGGAGGTGCCATGA
Upstream 100 bases:
>100_bases ACGCCTGGTCCAAACGTCCCGAAGTCACCTGGATGCACGACTGGCCCAGCGTCCAGCGCCGAACTGGACCGCTGGAAATA CGCCGCAGGCCACGAAGTGC
Downstream 100 bases:
>100_bases CTGAGAGATCACGGTGCTCCCAACGTGCCCACGCACCTGGGACGCCTGTGCAGCGCGTGGCAATACCATTCACTTTGGCG GTGCGGTCTATCGTCCGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 144; Mature: 143
Protein sequence:
>144_residues MAWCCAVSMNAPCAKEGPRDDLSPLLAHRCITAVDQPPQQSLTTGLPPMKTSDVSALFAYLVIAVSLSLASCTSLAPSGI LPTTRSEAVCDRLPPLPVPPISNEQPEIFAIFRRVIGLYINEINKYNAQVACRAQVHATHQEVP
Sequences:
>Translated_144_residues MAWCCAVSMNAPCAKEGPRDDLSPLLAHRCITAVDQPPQQSLTTGLPPMKTSDVSALFAYLVIAVSLSLASCTSLAPSGI LPTTRSEAVCDRLPPLPVPPISNEQPEIFAIFRRVIGLYINEINKYNAQVACRAQVHATHQEVP >Mature_143_residues AWCCAVSMNAPCAKEGPRDDLSPLLAHRCITAVDQPPQQSLTTGLPPMKTSDVSALFAYLVIAVSLSLASCTSLAPSGIL PTTRSEAVCDRLPPLPVPPISNEQPEIFAIFRRVIGLYINEINKYNAQVACRAQVHATHQEVP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15495; Mature: 15364
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 4.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAWCCAVSMNAPCAKEGPRDDLSPLLAHRCITAVDQPPQQSLTTGLPPMKTSDVSALFAY CCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCHHHHHHHHH LVIAVSLSLASCTSLAPSGILPTTRSEAVCDRLPPLPVPPISNEQPEIFAIFRRVIGLYI HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHH NEINKYNAQVACRAQVHATHQEVP HHHHHCCCCEEEHHHHHHHHCCCC >Mature Secondary Structure AWCCAVSMNAPCAKEGPRDDLSPLLAHRCITAVDQPPQQSLTTGLPPMKTSDVSALFAY CEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCHHHHHHHHH LVIAVSLSLASCTSLAPSGILPTTRSEAVCDRLPPLPVPPISNEQPEIFAIFRRVIGLYI HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHH NEINKYNAQVACRAQVHATHQEVP HHHHHCCCCEEEHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA