| Definition | Xylella fastidiosa Temecula1, complete genome. |
|---|---|
| Accession | NC_004556 |
| Length | 2,519,802 |
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The map label for this gene is dmt [C]
Identifier: 28199421
GI number: 28199421
Start: 1787879
End: 1788832
Strand: Reverse
Name: dmt [C]
Synonym: PD1542
Alternate gene names: 28199421
Gene position: 1788832-1787879 (Counterclockwise)
Preceding gene: 28199422
Following gene: 28199420
Centisome position: 70.99
GC content: 47.06
Gene sequence:
>954_bases ATGTCTGCTTCAGTGCCTCCGCTTGTTATTGTGATACCGGTTTTTGAAGATATCGAAGCTTCAAGCCAGTTATTCCAGGA ACTTGCAAAAAATCAGAGGACTGATACCTATATCGTTGCTGTTGACGATGGCTCCATACGCCAACCGCTTCATCCGGAAG CGATCACTGCCGCTGGATTGCAGGGAGTTGTGATTAAGTTGCGCCGCAATGTTGGTCACCAGCGAGCAATTGCGATTGGC TTGAGCTATGTGGTTGAGCATTTCGGTGACACGCATTACGTAGTCGTCATGGATTCTGATGGTGAGGATACTCCTGGAAG TATTTCTGAATTGCTGGGAAATCTGGATTCAGCACAGATTGATGTAGTAGTTGCCACTCGTAAGAGTCGTGTGGAAACTC TCAAGTTCCGCGTCTTTTATGTGATCTACAAGTACTTGTTTTCGTTGCTTAGCGGGCGAAAAATCGGTTTTGGTAATTTC ATGGCAGCCAAAATGTCGGCGGTGCGCAGGCTTGTTGCAATGCAGGAGTTGTGGATTCACGTAGCAGCCTGCGTGCTCAA TTCTAAGCTGCGCGTTTCGAGCTATGCTCTTGATCGGGGTATACGTTATGCGGGACGTAGCAAGATGAATTTTGTTAGTT TGGCGCTTCATGGCTTCCGTGCATTGATGGTTTTCGCTGAAGATGTTTTGGTACGGGTTGGTATTGCCTGCACTGTGATC GCCAGCTCTTCGATCTTTGGTGGCGTATTGGCATTTCTGTTGAAAATGTTTGGTTATGCGACACCAGGTTGGTTTTCTCT GGTTAACGGCATCCTGCTGCTTGTTTTCCTTCAAACTGCGGCGTTGACTTTACTTCTTCTGATGATGTCTGGAATCATCC GTAGTAGTGGTGTATCGCCTCCAGAGACTTACAAGGGTTTTATTGAAGAGATCCTGTATGCCTGCCCGAAGTAA
Upstream 100 bases:
>100_bases ATATCACTTTGGCTAAATCTCAACTTGGCTGGGAACCCAAGGTCTCGCTTGAAGATGGCCTCAGGGAAACCATTGCTTAT TTCCGTAAGCGTGTTTAGCA
Downstream 100 bases:
>100_bases TAGAAACAGAATTAATAGCGCGCTACGTGGTCAACTTCTTCGATATCTGCTTAATGGGCTAGTCGCAACTGCTGTCCATT ACACTATTTTGCGATTTACT
Product: dolichol-phosphate mannosyltransferase
Products: NA
Alternate protein names: Glycosyl Transferase; Glycosyl Transferase Group 2 Family Protein; Dolichol-Phosphate Mannosyltransferase; Glycosyltransferase
Number of amino acids: Translated: 317; Mature: 316
Protein sequence:
>317_residues MSASVPPLVIVIPVFEDIEASSQLFQELAKNQRTDTYIVAVDDGSIRQPLHPEAITAAGLQGVVIKLRRNVGHQRAIAIG LSYVVEHFGDTHYVVVMDSDGEDTPGSISELLGNLDSAQIDVVVATRKSRVETLKFRVFYVIYKYLFSLLSGRKIGFGNF MAAKMSAVRRLVAMQELWIHVAACVLNSKLRVSSYALDRGIRYAGRSKMNFVSLALHGFRALMVFAEDVLVRVGIACTVI ASSSIFGGVLAFLLKMFGYATPGWFSLVNGILLLVFLQTAALTLLLLMMSGIIRSSGVSPPETYKGFIEEILYACPK
Sequences:
>Translated_317_residues MSASVPPLVIVIPVFEDIEASSQLFQELAKNQRTDTYIVAVDDGSIRQPLHPEAITAAGLQGVVIKLRRNVGHQRAIAIG LSYVVEHFGDTHYVVVMDSDGEDTPGSISELLGNLDSAQIDVVVATRKSRVETLKFRVFYVIYKYLFSLLSGRKIGFGNF MAAKMSAVRRLVAMQELWIHVAACVLNSKLRVSSYALDRGIRYAGRSKMNFVSLALHGFRALMVFAEDVLVRVGIACTVI ASSSIFGGVLAFLLKMFGYATPGWFSLVNGILLLVFLQTAALTLLLLMMSGIIRSSGVSPPETYKGFIEEILYACPK >Mature_316_residues SASVPPLVIVIPVFEDIEASSQLFQELAKNQRTDTYIVAVDDGSIRQPLHPEAITAAGLQGVVIKLRRNVGHQRAIAIGL SYVVEHFGDTHYVVVMDSDGEDTPGSISELLGNLDSAQIDVVVATRKSRVETLKFRVFYVIYKYLFSLLSGRKIGFGNFM AAKMSAVRRLVAMQELWIHVAACVLNSKLRVSSYALDRGIRYAGRSKMNFVSLALHGFRALMVFAEDVLVRVGIACTVIA SSSIFGGVLAFLLKMFGYATPGWFSLVNGILLLVFLQTAALTLLLLMMSGIIRSSGVSPPETYKGFIEEILYACPK
Specific function: Involved In O Antigen Modification. Catalyzes The Transfer Of The Glucose Residue From Udp-Glucose To A Lipid Carrier (By Similarity). [C]
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.4.1.- [C]
Molecular weight: Translated: 34718; Mature: 34587
Theoretical pI: Translated: 9.24; Mature: 9.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSASVPPLVIVIPVFEDIEASSQLFQELAKNQRTDTYIVAVDDGSIRQPLHPEAITAAGL CCCCCCCEEEEEECHHCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHCH QGVVIKLRRNVGHQRAIAIGLSYVVEHFGDTHYVVVMDSDGEDTPGSISELLGNLDSAQI HHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHCCCCCCEE DVVVATRKSRVETLKFRVFYVIYKYLFSLLSGRKIGFGNFMAAKMSAVRRLVAMQELWIH EEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH VAACVLNSKLRVSSYALDRGIRYAGRSKMNFVSLALHGFRALMVFAEDVLVRVGIACTVI HHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASSSIFGGVLAFLLKMFGYATPGWFSLVNGILLLVFLQTAALTLLLLMMSGIIRSSGVSP HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PETYKGFIEEILYACPK HHHHHHHHHHHHHHCCC >Mature Secondary Structure SASVPPLVIVIPVFEDIEASSQLFQELAKNQRTDTYIVAVDDGSIRQPLHPEAITAAGL CCCCCCEEEEEECHHCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHCH QGVVIKLRRNVGHQRAIAIGLSYVVEHFGDTHYVVVMDSDGEDTPGSISELLGNLDSAQI HHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHCCCCCCEE DVVVATRKSRVETLKFRVFYVIYKYLFSLLSGRKIGFGNFMAAKMSAVRRLVAMQELWIH EEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH VAACVLNSKLRVSSYALDRGIRYAGRSKMNFVSLALHGFRALMVFAEDVLVRVGIACTVI HHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASSSIFGGVLAFLLKMFGYATPGWFSLVNGILLLVFLQTAALTLLLLMMSGIIRSSGVSP HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PETYKGFIEEILYACPK HHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA