| Definition | Xylella fastidiosa Temecula1, complete genome. |
|---|---|
| Accession | NC_004556 |
| Length | 2,519,802 |
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The map label for this gene is 28199326
Identifier: 28199326
GI number: 28199326
Start: 1683596
End: 1684489
Strand: Reverse
Name: 28199326
Synonym: PD1445
Alternate gene names: NA
Gene position: 1684489-1683596 (Counterclockwise)
Preceding gene: 28199327
Following gene: 28199324
Centisome position: 66.85
GC content: 51.57
Gene sequence:
>894_bases ATGGACGAAAGCAAAGTGTTGGTGAATGAATTAGTGGATGCGGCTATTGATCGGACTGTGTCATTGGCTCATTTGTTGCG TTTGGCGTTGGTGGTTGCCTCGCGCTTGGAACTTCCCGAGCTGGTGGCATGGATCAACAGAGAACTGAACGGCTACTCGT CCGATGACGTTCCTGACTATCGGCGGGTATCGTTGCAGTGGATGGTCGAGGATCCAGACAATGGCCGGGTTCCTTTCTTT CCTCCTCCTAAGATTGCTAAACAGGGCTCTCAAGACCCTATAAAGCAGTCGGTTCATGTGCTGATCCAGATGACTCAGGA ACCCCCGGGGACGAGCTTCAGTTATTTCCACCCTGAGTTAGAGTGCCGGTTGCCAGAGGTGATGCGAGGTTCCTTCGGAG AGGATGTGCGTCTGGTGCGCGTGTTATCGAACCTACAGGCGCATGGAATCCTCGAAAAGGTGCGTGACAAGGTGCTGCAA TGGGCACTCAATCTGGAGGCTAAGGGGGTGCTTGGCCAGGGAAGGCTCTTCTCGCCGCAGGAAAAGCAGATTGTGAAAAA CGATACTGTTAACGTCGGAGGCGTTAAAAATTCCACTGACCAAATCAGGGCGATGGGTTCTCATGACGCCCATACTCATA CTCACACGGTGGAAGACATCGACGCGTTGTTGCCGTTGATCGGATGTCTGCGTAAAGCTATCGACGAAGGGACTCTCTTA CAAGATATTCACCACACGTTGCAAGCTAATCTAATGACTTTGCAAGCGCAGGCCATTTCATCAAAACCGGAATGGCCCGC CATAAAAATGCTCCTGCATAGGATCAAGGCCATGTTAGATAACTCAGATGTGGCTGCGACAGAAGTACTCTCCCATCTGA GAGCCATTCGGTGA
Upstream 100 bases:
>100_bases CAGAGTGAGCTTGCCATTGCGTTGTTGCAGATGATGGCCGTGTTTGGGAGAAGTAACGATGGCACAATGAGCATCTAGTT CCCTGACGGTTGCCATGATC
Downstream 100 bases:
>100_bases TGCCAATGGCGCTTGGCTTCTCTATCGTCATTCCCTCGTTGTGCTGCCAAGTCTCGGATTGTCTGGCAGCGCTAACCAAG TAAATCACGTTTGGAGGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 297; Mature: 297
Protein sequence:
>297_residues MDESKVLVNELVDAAIDRTVSLAHLLRLALVVASRLELPELVAWINRELNGYSSDDVPDYRRVSLQWMVEDPDNGRVPFF PPPKIAKQGSQDPIKQSVHVLIQMTQEPPGTSFSYFHPELECRLPEVMRGSFGEDVRLVRVLSNLQAHGILEKVRDKVLQ WALNLEAKGVLGQGRLFSPQEKQIVKNDTVNVGGVKNSTDQIRAMGSHDAHTHTHTVEDIDALLPLIGCLRKAIDEGTLL QDIHHTLQANLMTLQAQAISSKPEWPAIKMLLHRIKAMLDNSDVAATEVLSHLRAIR
Sequences:
>Translated_297_residues MDESKVLVNELVDAAIDRTVSLAHLLRLALVVASRLELPELVAWINRELNGYSSDDVPDYRRVSLQWMVEDPDNGRVPFF PPPKIAKQGSQDPIKQSVHVLIQMTQEPPGTSFSYFHPELECRLPEVMRGSFGEDVRLVRVLSNLQAHGILEKVRDKVLQ WALNLEAKGVLGQGRLFSPQEKQIVKNDTVNVGGVKNSTDQIRAMGSHDAHTHTHTVEDIDALLPLIGCLRKAIDEGTLL QDIHHTLQANLMTLQAQAISSKPEWPAIKMLLHRIKAMLDNSDVAATEVLSHLRAIR >Mature_297_residues MDESKVLVNELVDAAIDRTVSLAHLLRLALVVASRLELPELVAWINRELNGYSSDDVPDYRRVSLQWMVEDPDNGRVPFF PPPKIAKQGSQDPIKQSVHVLIQMTQEPPGTSFSYFHPELECRLPEVMRGSFGEDVRLVRVLSNLQAHGILEKVRDKVLQ WALNLEAKGVLGQGRLFSPQEKQIVKNDTVNVGGVKNSTDQIRAMGSHDAHTHTHTVEDIDALLPLIGCLRKAIDEGTLL QDIHHTLQANLMTLQAQAISSKPEWPAIKMLLHRIKAMLDNSDVAATEVLSHLRAIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33203; Mature: 33203
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDESKVLVNELVDAAIDRTVSLAHLLRLALVVASRLELPELVAWINRELNGYSSDDVPDY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCH RRVSLQWMVEDPDNGRVPFFPPPKIAKQGSQDPIKQSVHVLIQMTQEPPGTSFSYFHPEL HEEEEEEEEECCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCEECCHH ECRLPEVMRGSFGEDVRLVRVLSNLQAHGILEKVRDKVLQWALNLEAKGVLGQGRLFSPQ HCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCH EKQIVKNDTVNVGGVKNSTDQIRAMGSHDAHTHTHTVEDIDALLPLIGCLRKAIDEGTLL HHHHHHCCCEECCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHH QDIHHTLQANLMTLQAQAISSKPEWPAIKMLLHRIKAMLDNSDVAATEVLSHLRAIR HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MDESKVLVNELVDAAIDRTVSLAHLLRLALVVASRLELPELVAWINRELNGYSSDDVPDY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCH RRVSLQWMVEDPDNGRVPFFPPPKIAKQGSQDPIKQSVHVLIQMTQEPPGTSFSYFHPEL HEEEEEEEEECCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCEECCHH ECRLPEVMRGSFGEDVRLVRVLSNLQAHGILEKVRDKVLQWALNLEAKGVLGQGRLFSPQ HCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCH EKQIVKNDTVNVGGVKNSTDQIRAMGSHDAHTHTHTVEDIDALLPLIGCLRKAIDEGTLL HHHHHHCCCEECCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHH QDIHHTLQANLMTLQAQAISSKPEWPAIKMLLHRIKAMLDNSDVAATEVLSHLRAIR HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA