| Definition | Xylella fastidiosa Temecula1, complete genome. |
|---|---|
| Accession | NC_004556 |
| Length | 2,519,802 |
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The map label for this gene is yfjG [C]
Identifier: 28199261
GI number: 28199261
Start: 1599665
End: 1600105
Strand: Reverse
Name: yfjG [C]
Synonym: PD1377
Alternate gene names: 28199261
Gene position: 1600105-1599665 (Counterclockwise)
Preceding gene: 28199263
Following gene: 28199260
Centisome position: 63.5
GC content: 48.75
Gene sequence:
>441_bases ATGCCTATTATTTGCCGCAGCGCTTTGGTCTGCCACAGCGCAAGTTGTATGTTTGATCTTGTCAACGATATTACTGCTTA TCCTAGCCGTTTTAGTTGGTGTCATTCGGCGCAGTTATTTGAGCATGATGAACATCGTTTGATGGCGCGGTTGGATGTGG TTGTAGGAGCGTTCCGGACTTGGTTTATCACTGACAATACCCTGAAGCGGCCATCTCAGATAGATATGAAGTTACGTGAT GGGCCATTCAAGCGTTTGGAAGGACGCTGGGAGTTCCAGATGTTGGCGGAGGAGTCTTGCAAGGTCAGTTTGAGGCTGGA GTTCGAGCCAGTGTCTCGTATGTTGAATCCGGCGTTGACACTTGGATTCAATGGCTTAGCTGATCGCATGGTCAAGGACT TCATTCGCATTGCTGATTGTGGTGGCAGTGGTGAGAGTTGA
Upstream 100 bases:
>100_bases TGCTCTTTGCTTTATTCTTGGGATGTTTGTTGTTCATGCGGCTATTGTCCCAGAATAGAGTTCTTGTGAACGAATCTGTC CGTTTGTCACGCCTAATGTT
Downstream 100 bases:
>100_bases AGTGCTAATTGCTTGGCCAGATCGCGTTCATTGCTGCGAGATCATGTTGCAAGAAGGAGCAAGGGTGGTCGATGCGGTGG AGATGGCTGCGTTAAATGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 146; Mature: 145
Protein sequence:
>146_residues MPIICRSALVCHSASCMFDLVNDITAYPSRFSWCHSAQLFEHDEHRLMARLDVVVGAFRTWFITDNTLKRPSQIDMKLRD GPFKRLEGRWEFQMLAEESCKVSLRLEFEPVSRMLNPALTLGFNGLADRMVKDFIRIADCGGSGES
Sequences:
>Translated_146_residues MPIICRSALVCHSASCMFDLVNDITAYPSRFSWCHSAQLFEHDEHRLMARLDVVVGAFRTWFITDNTLKRPSQIDMKLRD GPFKRLEGRWEFQMLAEESCKVSLRLEFEPVSRMLNPALTLGFNGLADRMVKDFIRIADCGGSGES >Mature_145_residues PIICRSALVCHSASCMFDLVNDITAYPSRFSWCHSAQLFEHDEHRLMARLDVVVGAFRTWFITDNTLKRPSQIDMKLRDG PFKRLEGRWEFQMLAEESCKVSLRLEFEPVSRMLNPALTLGFNGLADRMVKDFIRIADCGGSGES
Specific function: Unknown
COG id: COG2867
COG function: function code I; Oligoketide cyclase/lipid transport protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0083 family [H]
Homologues:
Organism=Escherichia coli, GI1788972, Length=134, Percent_Identity=37.3134328358209, Blast_Score=100, Evalue=5e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005031 [H]
Pfam domain/function: PF03364 Polyketide_cyc [H]
EC number: NA
Molecular weight: Translated: 16706; Mature: 16574
Theoretical pI: Translated: 6.90; Mature: 6.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.1 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 8.9 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 8.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIICRSALVCHSASCMFDLVNDITAYPSRFSWCHSAQLFEHDEHRLMARLDVVVGAFRT CCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH WFITDNTLKRPSQIDMKLRDGPFKRLEGRWEFQMLAEESCKVSLRLEFEPVSRMLNPALT EEEECCCCCCCCCCCEEECCCCHHHCCCCHHHHEECCCCCEEEEEEEEHHHHHHHCHHHH LGFNGLADRMVKDFIRIADCGGSGES CCCCHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure PIICRSALVCHSASCMFDLVNDITAYPSRFSWCHSAQLFEHDEHRLMARLDVVVGAFRT CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH WFITDNTLKRPSQIDMKLRDGPFKRLEGRWEFQMLAEESCKVSLRLEFEPVSRMLNPALT EEEECCCCCCCCCCCEEECCCCHHHCCCCHHHHEECCCCCEEEEEEEEHHHHHHHCHHHH LGFNGLADRMVKDFIRIADCGGSGES CCCCHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA