| Definition | Xylella fastidiosa Temecula1, complete genome. |
|---|---|
| Accession | NC_004556 |
| Length | 2,519,802 |
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The map label for this gene is fur [H]
Identifier: 28199258
GI number: 28199258
Start: 1598476
End: 1598886
Strand: Reverse
Name: fur [H]
Synonym: PD1374
Alternate gene names: 28199258
Gene position: 1598886-1598476 (Counterclockwise)
Preceding gene: 28199260
Following gene: 28199256
Centisome position: 63.45
GC content: 48.42
Gene sequence:
>411_bases ATGGAATTAAATGATTTACGTAAAGTTGGTTTGAAGGTGACACATCCGCGGATCCGTATCCTCGAACTGCTCGAACAGTC CAGTAGTGAACATCACCTTAGTGCTGAAGACATTTACCGGCAGTTGCTTGAGCAGGGTAACGAAATTGGCTTGGCAACAG TGTATCGGGTGCTGACTCAGTTTGAGGCGGCAGGATTAGTGCTTAAGCATAATTTCGAGAGCGGGCAGGCGGTCTACGAG ATCGACCGTGGCGGACATCACGATCATATGGTGGATGTCGATACCGGTAAGATCATTGAGTTTCACAACGAGGAGATTGA GTTGTTGCAGCGCAGCATTGCTGCTGAACGCGGTTATGAGTTGGAAGAACACTCGTTGGTCTTGTACGTACGTAAAAAAC GCGGTCGTTGA
Upstream 100 bases:
>100_bases GTCAACAGGTAAATATTTGCACGATGATACACTCCTATGCGGTTGCCGTAACCGATTCACGAGGTCGCGGATGCTAAATG GTCCATCAATTGAGAAGTCA
Downstream 100 bases:
>100_bases TGGTGAGTGCGTTTCCGTGCGTGTAACGGGAGAACAGAGTGGTGTGAGGGTAGGGGGAGCGGAGTTATTTTCTTGAATGT ACAGTGCTTCATGGATGCCT
Product: ferric uptake regulator
Products: NA
Alternate protein names: Ferric uptake regulator [H]
Number of amino acids: Translated: 136; Mature: 136
Protein sequence:
>136_residues MELNDLRKVGLKVTHPRIRILELLEQSSSEHHLSAEDIYRQLLEQGNEIGLATVYRVLTQFEAAGLVLKHNFESGQAVYE IDRGGHHDHMVDVDTGKIIEFHNEEIELLQRSIAAERGYELEEHSLVLYVRKKRGR
Sequences:
>Translated_136_residues MELNDLRKVGLKVTHPRIRILELLEQSSSEHHLSAEDIYRQLLEQGNEIGLATVYRVLTQFEAAGLVLKHNFESGQAVYE IDRGGHHDHMVDVDTGKIIEFHNEEIELLQRSIAAERGYELEEHSLVLYVRKKRGR >Mature_136_residues MELNDLRKVGLKVTHPRIRILELLEQSSSEHHLSAEDIYRQLLEQGNEIGLATVYRVLTQFEAAGLVLKHNFESGQAVYE IDRGGHHDHMVDVDTGKIIEFHNEEIELLQRSIAAERGYELEEHSLVLYVRKKRGR
Specific function: Fur acts as a repressor, employing Fe(2+) as a cofactor to bind the operator of the iron transport operon. Involved in exotoxin A regulation, siderophore regulation and manganese susceptibility [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
Organism=Escherichia coli, GI1786899, Length=124, Percent_Identity=56.4516129032258, Blast_Score=146, Evalue=5e-37,
Paralogues:
None
Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 - InterPro: IPR011991 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 15725; Mature: 15725
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELNDLRKVGLKVTHPRIRILELLEQSSSEHHLSAEDIYRQLLEQGNEIGLATVYRVLTQ CCHHHHHHCCEECCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHH FEAAGLVLKHNFESGQAVYEIDRGGHHDHMVDVDTGKIIEFHNEEIELLQRSIAAERGYE HHHCCEEEEECCCCCCEEEEECCCCCCCCEEECCCCCEEEECCHHHHHHHHHHHHHCCCC LEEHSLVLYVRKKRGR CCCCCEEEEEECCCCC >Mature Secondary Structure MELNDLRKVGLKVTHPRIRILELLEQSSSEHHLSAEDIYRQLLEQGNEIGLATVYRVLTQ CCHHHHHHCCEECCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHH FEAAGLVLKHNFESGQAVYEIDRGGHHDHMVDVDTGKIIEFHNEEIELLQRSIAAERGYE HHHCCEEEEECCCCCCEEEEECCCCCCCCEEECCCCCEEEECCHHHHHHHHHHHHHCCCC LEEHSLVLYVRKKRGR CCCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8478325; 9852033; 10984043 [H]