| Definition | Xylella fastidiosa Temecula1, complete genome. |
|---|---|
| Accession | NC_004556 |
| Length | 2,519,802 |
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The map label for this gene is lgt
Identifier: 28199249
GI number: 28199249
Start: 1587506
End: 1588411
Strand: Reverse
Name: lgt
Synonym: PD1365
Alternate gene names: 28199249
Gene position: 1588411-1587506 (Counterclockwise)
Preceding gene: 28199250
Following gene: 28199248
Centisome position: 63.04
GC content: 53.2
Gene sequence:
>906_bases ATGATTTATCTCCACGCTATCGATCCGATTGCTTTCTCGCTTGGTCCGGTGAAGGTGCATTGGTATGGCTTGATGTATCT GGCAGGTTTTGGTGCGGCGTGGTGCTTGGGACGCCAACGCATCCAGGCCGGGCGTTTGCTTGGTGTCAACATAGATGGTT TTTCCGACCTGTTGTTCTACGCGATGATGGGTGTGGTGTTGGGTGGCCGTGTGGGTTACATGCTGTTCTATGCGTTCCAT GACTTCTTGCAAGAACCATTGCTGCTTTTTCGGGTGTGGGAAGGGGGCATGAGTTTTCATGGAGGTTTGATTGGCGTCCT ACTGGCAGTCGCTTGGTGGAGCCGGCGTCAGCGCATGCATATGTTCGATGTGGTTGATTTTTGCGCACCCCTGGTCCCAG TGGGCTTGGGTTTTGGTCGGCTTGGCAACTTCATTGGCGGTGAGCTTTGGGGCAAGCTCACACACAATGGCTGGGGAGTA ATTTTCCCGCGTGCTCCGCTGAGCGATGTGCCTGCTGGGCAGCTTGCGATGCAGGATGTGATAAATTTTGTGCAGATCCA AGAGCATTATGCCGCTGGACTTTTGGGTCACTATGCCAGGCATCCCTCGCAGCTGTATGAAGCGTTCCTGGAGGGGCTGG TGATGTTCATAGTGCTATGGCTATTTTCGCGCAAACCACGTCCACGTTATGCGGTGTCTGGATTATTCGCGTTGTTGTAC GGTGTGTTTCGTTTTTTGGTCGAGTTTGTGCGTATGCCAGACAATGGTGTCTATGTAGCGTTCGGATGGCTGACTCGCGG CCAGATCTTAAGCTTGCCGTTGATCGTGATTGGATTGTTCCTGTTCTGGTTGTCGTGCCGCTCACCAGTATTACAGCCAG TGCCTGCCCCTGAGGTCGCTAAGTGA
Upstream 100 bases:
>100_bases CGCGTCTGTTTTAGTGCTTTTGCTTGTTGCAAGTTATCTAAAGGATGGCTGCACGGTGGCACAATGGGTGTTCTCGCTTT GGGGCAGGGCACGGTTCCAC
Downstream 100 bases:
>100_bases AGCAGTACCTTGAATTACTGAATGATGTGCTTGTGCATGGCATAAAAAAGCCTGACCGCACTGGCACGGGGACACGCAGT GTGTTCGGTTGGCAGATGCG
Product: prolipoprotein diacylglyceryl transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 301; Mature: 301
Protein sequence:
>301_residues MIYLHAIDPIAFSLGPVKVHWYGLMYLAGFGAAWCLGRQRIQAGRLLGVNIDGFSDLLFYAMMGVVLGGRVGYMLFYAFH DFLQEPLLLFRVWEGGMSFHGGLIGVLLAVAWWSRRQRMHMFDVVDFCAPLVPVGLGFGRLGNFIGGELWGKLTHNGWGV IFPRAPLSDVPAGQLAMQDVINFVQIQEHYAAGLLGHYARHPSQLYEAFLEGLVMFIVLWLFSRKPRPRYAVSGLFALLY GVFRFLVEFVRMPDNGVYVAFGWLTRGQILSLPLIVIGLFLFWLSCRSPVLQPVPAPEVAK
Sequences:
>Translated_301_residues MIYLHAIDPIAFSLGPVKVHWYGLMYLAGFGAAWCLGRQRIQAGRLLGVNIDGFSDLLFYAMMGVVLGGRVGYMLFYAFH DFLQEPLLLFRVWEGGMSFHGGLIGVLLAVAWWSRRQRMHMFDVVDFCAPLVPVGLGFGRLGNFIGGELWGKLTHNGWGV IFPRAPLSDVPAGQLAMQDVINFVQIQEHYAAGLLGHYARHPSQLYEAFLEGLVMFIVLWLFSRKPRPRYAVSGLFALLY GVFRFLVEFVRMPDNGVYVAFGWLTRGQILSLPLIVIGLFLFWLSCRSPVLQPVPAPEVAK >Mature_301_residues MIYLHAIDPIAFSLGPVKVHWYGLMYLAGFGAAWCLGRQRIQAGRLLGVNIDGFSDLLFYAMMGVVLGGRVGYMLFYAFH DFLQEPLLLFRVWEGGMSFHGGLIGVLLAVAWWSRRQRMHMFDVVDFCAPLVPVGLGFGRLGNFIGGELWGKLTHNGWGV IFPRAPLSDVPAGQLAMQDVINFVQIQEHYAAGLLGHYARHPSQLYEAFLEGLVMFIVLWLFSRKPRPRYAVSGLFALLY GVFRFLVEFVRMPDNGVYVAFGWLTRGQILSLPLIVIGLFLFWLSCRSPVLQPVPAPEVAK
Specific function: Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
COG id: COG0682
COG function: function code M; Prolipoprotein diacylglyceryltransferase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lgt family
Homologues:
Organism=Escherichia coli, GI1789192, Length=295, Percent_Identity=49.1525423728814, Blast_Score=244, Evalue=5e-66,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): LGT_XYLF2 (B2I6F1)
Other databases:
- EMBL: CP001011 - RefSeq: YP_001830135.1 - GeneID: 6202410 - GenomeReviews: CP001011_GR - KEGG: xfn:XfasM23_1450 - HOGENOM: HBG450278 - OMA: RIGPLAI - ProtClustDB: PRK00052 - HAMAP: MF_01147 - InterPro: IPR001640 - TIGRFAMs: TIGR00544
Pfam domain/function: PF01790 LGT
EC number: 2.4.99.- [C]
Molecular weight: Translated: 33816; Mature: 33816
Theoretical pI: Translated: 9.26; Mature: 9.26
Prosite motif: PS01311 LGT
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xd21e8b0)-; HASH(0xe378c70)-; HASH(0xdfef864)-; HASH(0xe9bb830)-; HASH(0xe9b8cec)-; HASH(0xe8661f4)-; HASH(0xe9b8e9c)-;
Cys/Met content:
1.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIYLHAIDPIAFSLGPVKVHWYGLMYLAGFGAAWCLGRQRIQAGRLLGVNIDGFSDLLFY CEEEEECCHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHH AMMGVVLGGRVGYMLFYAFHDFLQEPLLLFRVWEGGMSFHGGLIGVLLAVAWWSRRQRMH HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH MFDVVDFCAPLVPVGLGFGRLGNFIGGELWGKLTHNGWGVIFPRAPLSDVPAGQLAMQDV HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHH INFVQIQEHYAAGLLGHYARHPSQLYEAFLEGLVMFIVLWLFSRKPRPRYAVSGLFALLY HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH GVFRFLVEFVRMPDNGVYVAFGWLTRGQILSLPLIVIGLFLFWLSCRSPVLQPVPAPEVA HHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC K H >Mature Secondary Structure MIYLHAIDPIAFSLGPVKVHWYGLMYLAGFGAAWCLGRQRIQAGRLLGVNIDGFSDLLFY CEEEEECCHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHH AMMGVVLGGRVGYMLFYAFHDFLQEPLLLFRVWEGGMSFHGGLIGVLLAVAWWSRRQRMH HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH MFDVVDFCAPLVPVGLGFGRLGNFIGGELWGKLTHNGWGVIFPRAPLSDVPAGQLAMQDV HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHH INFVQIQEHYAAGLLGHYARHPSQLYEAFLEGLVMFIVLWLFSRKPRPRYAVSGLFALLY HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH GVFRFLVEFVRMPDNGVYVAFGWLTRGQILSLPLIVIGLFLFWLSCRSPVLQPVPAPEVA HHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC K H
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA