| Definition | Xylella fastidiosa Temecula1, complete genome. |
|---|---|
| Accession | NC_004556 |
| Length | 2,519,802 |
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The map label for this gene is 28199238
Identifier: 28199238
GI number: 28199238
Start: 1575477
End: 1575749
Strand: Reverse
Name: 28199238
Synonym: PD1354
Alternate gene names: NA
Gene position: 1575749-1575477 (Counterclockwise)
Preceding gene: 28199239
Following gene: 28199237
Centisome position: 62.53
GC content: 38.83
Gene sequence:
>273_bases ATGATAATTGCATTTTATAGTCTTGTTGCATCGCACCTTCCTAGGCCTAGTGGACGACTTGTAGGGAAGATTTCTGCAAC TATTACTTTTCTTTTCGTGTCTTTAGGTTCAATGACTTCGATCTCGGATTTGGATATTTCTTCATTGGATCTTGGTAGTG CAGCGATACTTGCGGTTGCGCTCTCCACATCCTTATTATTAATGTATCGTTATATAGATACTCATCTCAATCCTGATGGG AGTCTAAAGGAAAAGAAGGATGACTCTAAGTAA
Upstream 100 bases:
>100_bases TAGCTTATGTTTCTAGATTCTAAGTTAATTTCTTCTGTGAACTCATGATGCTTTCTGGTGCCCACTTTTAACGGTGATAA CAATGAATAAATTTCAGACG
Downstream 100 bases:
>100_bases GGTCGTTGGCTTCTAATCATCTGAGCAGATGCCCATCTTGGAGAATTTAAATCCATTTATTATTATATATAAAATAATGA ATTAATTTATCGAAATACTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 90; Mature: 90
Protein sequence:
>90_residues MIIAFYSLVASHLPRPSGRLVGKISATITFLFVSLGSMTSISDLDISSLDLGSAAILAVALSTSLLLMYRYIDTHLNPDG SLKEKKDDSK
Sequences:
>Translated_90_residues MIIAFYSLVASHLPRPSGRLVGKISATITFLFVSLGSMTSISDLDISSLDLGSAAILAVALSTSLLLMYRYIDTHLNPDG SLKEKKDDSK >Mature_90_residues MIIAFYSLVASHLPRPSGRLVGKISATITFLFVSLGSMTSISDLDISSLDLGSAAILAVALSTSLLLMYRYIDTHLNPDG SLKEKKDDSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9660; Mature: 9660
Theoretical pI: Translated: 7.69; Mature: 7.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIAFYSLVASHLPRPSGRLVGKISATITFLFVSLGSMTSISDLDISSLDLGSAAILAVA CEEHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH LSTSLLLMYRYIDTHLNPDGSLKEKKDDSK HHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MIIAFYSLVASHLPRPSGRLVGKISATITFLFVSLGSMTSISDLDISSLDLGSAAILAVA CEEHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH LSTSLLLMYRYIDTHLNPDGSLKEKKDDSK HHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA