Definition Xylella fastidiosa Temecula1, complete genome.
Accession NC_004556
Length 2,519,802

Click here to switch to the map view.

The map label for this gene is 28199238

Identifier: 28199238

GI number: 28199238

Start: 1575477

End: 1575749

Strand: Reverse

Name: 28199238

Synonym: PD1354

Alternate gene names: NA

Gene position: 1575749-1575477 (Counterclockwise)

Preceding gene: 28199239

Following gene: 28199237

Centisome position: 62.53

GC content: 38.83

Gene sequence:

>273_bases
ATGATAATTGCATTTTATAGTCTTGTTGCATCGCACCTTCCTAGGCCTAGTGGACGACTTGTAGGGAAGATTTCTGCAAC
TATTACTTTTCTTTTCGTGTCTTTAGGTTCAATGACTTCGATCTCGGATTTGGATATTTCTTCATTGGATCTTGGTAGTG
CAGCGATACTTGCGGTTGCGCTCTCCACATCCTTATTATTAATGTATCGTTATATAGATACTCATCTCAATCCTGATGGG
AGTCTAAAGGAAAAGAAGGATGACTCTAAGTAA

Upstream 100 bases:

>100_bases
TAGCTTATGTTTCTAGATTCTAAGTTAATTTCTTCTGTGAACTCATGATGCTTTCTGGTGCCCACTTTTAACGGTGATAA
CAATGAATAAATTTCAGACG

Downstream 100 bases:

>100_bases
GGTCGTTGGCTTCTAATCATCTGAGCAGATGCCCATCTTGGAGAATTTAAATCCATTTATTATTATATATAAAATAATGA
ATTAATTTATCGAAATACTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 90; Mature: 90

Protein sequence:

>90_residues
MIIAFYSLVASHLPRPSGRLVGKISATITFLFVSLGSMTSISDLDISSLDLGSAAILAVALSTSLLLMYRYIDTHLNPDG
SLKEKKDDSK

Sequences:

>Translated_90_residues
MIIAFYSLVASHLPRPSGRLVGKISATITFLFVSLGSMTSISDLDISSLDLGSAAILAVALSTSLLLMYRYIDTHLNPDG
SLKEKKDDSK
>Mature_90_residues
MIIAFYSLVASHLPRPSGRLVGKISATITFLFVSLGSMTSISDLDISSLDLGSAAILAVALSTSLLLMYRYIDTHLNPDG
SLKEKKDDSK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9660; Mature: 9660

Theoretical pI: Translated: 7.69; Mature: 7.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIAFYSLVASHLPRPSGRLVGKISATITFLFVSLGSMTSISDLDISSLDLGSAAILAVA
CEEHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH
LSTSLLLMYRYIDTHLNPDGSLKEKKDDSK
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIIAFYSLVASHLPRPSGRLVGKISATITFLFVSLGSMTSISDLDISSLDLGSAAILAVA
CEEHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH
LSTSLLLMYRYIDTHLNPDGSLKEKKDDSK
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA