Definition Xylella fastidiosa Temecula1, complete genome.
Accession NC_004556
Length 2,519,802

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The map label for this gene is pspA

Identifier: 28198885

GI number: 28198885

Start: 1181580

End: 1182764

Strand: Reverse

Name: pspA

Synonym: PD0986

Alternate gene names: NA

Gene position: 1182764-1181580 (Counterclockwise)

Preceding gene: 28198886

Following gene: 28198884

Centisome position: 46.94

GC content: 60.08

Gene sequence:

>1185_bases
GTGACGGGCTGGGCGATCCCCTGGAGGCCGCTCATCACTCAAGTCATGAACCGCCTTTATATTCAGGACAGCGGCCAAAC
CTACCGCAACACCACCTACCAGGCGTATACCAAACCCACCCACCAGCTGGGGGAACTGGTGACCGCCGGCATTGAGAAAC
TGCTGGAGATCACCAAAATCGCCAGCCCCGCCTCGCGGCTCAAGGCCGCGGCGGCCAAAGAGCTGATGTATAACACCGAG
CAAGGTAATTACTCCAACCTGGTGTATCTGGAGGGCCACAGCCGCGGCACGATGACCCTTAGCAATGCACTGCGGGTGCT
GGCAGGATTTAATGTGGGTGACACGAAATTAGAGGTGCTTGCCTACAACCCTGCGGCAGAAGGCAACCGCCTTAACACCA
CCTACCAGGCGTATACCAAACCCACCCACCAGCTGGGGGAACTGGTGACCGCCGGCATTGAGAAACTGCTGGAGATCACC
AAAATCGCCAGCCCCGCCTCGCGGCTCAAGGCCGCGGCGGCCAAAGAGCTGATGTATAACACCGAGCAAGGTAATTACTC
CAACCTGGTGTATTTGGAGGGCCACAGCCGCGGCACGATGACCCTTAGCAATGCATTGCGGGTGCTCGCCGCGGATCATG
TGTTGAGTGACACTCTTGAAATCCGCGCCTACAACCCTGCGGCAGAAGGCAACCGCCTTGCTGAAGCCGCTGCCCTGGTG
ACGAAAAAACCAGTCAAGACCTGGGCCCCGCCCAAGGACTTTGTGGCTAACAAGATTGGCGGCTATGCCGGCAATGCCAC
CTTCCATGATCTGCGGGAGATCTTCCAAACCAACTACTCCGTGCACAGCAGCGGCGGCACCGCCGCCCTGGGCAGCGACT
CAAACCATGTCGATAAAGAGAAACTGTTCAGCTACGAAGGCCTGGATATCAAGGACATGAACGCCAAGCGTCAGGGGCGG
ACCATCGGGCTGCTGCAGCAATGGCAGAAGACGCGGCGTCCCGAGGACCCGGTGGCGACCCAACTCACCCAGTTGCAACG
CCTGCTGTGGCAATCGGGCCAGTGGCAACAGCAGTTAGACAACACCCCCGGGCTGCTGACACGGCCCACCCCGACCACCC
CGGACGCCCCCAGCGCCCGGCAACAGCAACTCCAACAGTTGCGCCAGTCCCTCACCCCCTACTAA

Upstream 100 bases:

>100_bases
TCAACTTTATTGAAGCCGCCCGCCAAAAAAACACCGAAGACTACCAACGCGCCCGCAAACTGATGGACGGCATCTTGCAA
TCGGTGGTGATCCAGAAGCA

Downstream 100 bases:

>100_bases
GGAGACCCCCTTATGTCCCTGCATCCGCGACTGTCTTGCTCCCTGCTGGCCGCCAGCCTGCTGCTGGCCGGCTGCAGCAG
CGGCCCCCCCATCGACAGCC

Product: hemagglutinin-like secreted protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 394; Mature: 393

Protein sequence:

>394_residues
MTGWAIPWRPLITQVMNRLYIQDSGQTYRNTTYQAYTKPTHQLGELVTAGIEKLLEITKIASPASRLKAAAAKELMYNTE
QGNYSNLVYLEGHSRGTMTLSNALRVLAGFNVGDTKLEVLAYNPAAEGNRLNTTYQAYTKPTHQLGELVTAGIEKLLEIT
KIASPASRLKAAAAKELMYNTEQGNYSNLVYLEGHSRGTMTLSNALRVLAADHVLSDTLEIRAYNPAAEGNRLAEAAALV
TKKPVKTWAPPKDFVANKIGGYAGNATFHDLREIFQTNYSVHSSGGTAALGSDSNHVDKEKLFSYEGLDIKDMNAKRQGR
TIGLLQQWQKTRRPEDPVATQLTQLQRLLWQSGQWQQQLDNTPGLLTRPTPTTPDAPSARQQQLQQLRQSLTPY

Sequences:

>Translated_394_residues
MTGWAIPWRPLITQVMNRLYIQDSGQTYRNTTYQAYTKPTHQLGELVTAGIEKLLEITKIASPASRLKAAAAKELMYNTE
QGNYSNLVYLEGHSRGTMTLSNALRVLAGFNVGDTKLEVLAYNPAAEGNRLNTTYQAYTKPTHQLGELVTAGIEKLLEIT
KIASPASRLKAAAAKELMYNTEQGNYSNLVYLEGHSRGTMTLSNALRVLAADHVLSDTLEIRAYNPAAEGNRLAEAAALV
TKKPVKTWAPPKDFVANKIGGYAGNATFHDLREIFQTNYSVHSSGGTAALGSDSNHVDKEKLFSYEGLDIKDMNAKRQGR
TIGLLQQWQKTRRPEDPVATQLTQLQRLLWQSGQWQQQLDNTPGLLTRPTPTTPDAPSARQQQLQQLRQSLTPY
>Mature_393_residues
TGWAIPWRPLITQVMNRLYIQDSGQTYRNTTYQAYTKPTHQLGELVTAGIEKLLEITKIASPASRLKAAAAKELMYNTEQ
GNYSNLVYLEGHSRGTMTLSNALRVLAGFNVGDTKLEVLAYNPAAEGNRLNTTYQAYTKPTHQLGELVTAGIEKLLEITK
IASPASRLKAAAAKELMYNTEQGNYSNLVYLEGHSRGTMTLSNALRVLAADHVLSDTLEIRAYNPAAEGNRLAEAAALVT
KKPVKTWAPPKDFVANKIGGYAGNATFHDLREIFQTNYSVHSSGGTAALGSDSNHVDKEKLFSYEGLDIKDMNAKRQGRT
IGLLQQWQKTRRPEDPVATQLTQLQRLLWQSGQWQQQLDNTPGLLTRPTPTTPDAPSARQQQLQQLRQSLTPY

Specific function: Unknown

COG id: COG3210

COG function: function code U; Large exoproteins involved in heme utilization or adhesion

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43632; Mature: 43501

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGWAIPWRPLITQVMNRLYIQDSGQTYRNTTYQAYTKPTHQLGELVTAGIEKLLEITKI
CCCCCCCHHHHHHHHHHHHEECCCCCCHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHH
ASPASRLKAAAAKELMYNTEQGNYSNLVYLEGHSRGTMTLSNALRVLAGFNVGDTKLEVL
CCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEEE
AYNPAAEGNRLNTTYQAYTKPTHQLGELVTAGIEKLLEITKIASPASRLKAAAAKELMYN
EECCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHC
TEQGNYSNLVYLEGHSRGTMTLSNALRVLAADHVLSDTLEIRAYNPAAEGNRLAEAAALV
CCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHH
TKKPVKTWAPPKDFVANKIGGYAGNATFHDLREIFQTNYSVHSSGGTAALGSDSNHVDKE
HCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEECCCCCEEECCCCCCCCHH
KLFSYEGLDIKDMNAKRQGRTIGLLQQWQKTRRPEDPVATQLTQLQRLLWQSGQWQQQLD
HHHCCCCCCEECCCCHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHC
NTPGLLTRPTPTTPDAPSARQQQLQQLRQSLTPY
CCCCCEECCCCCCCCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TGWAIPWRPLITQVMNRLYIQDSGQTYRNTTYQAYTKPTHQLGELVTAGIEKLLEITKI
CCCCCCHHHHHHHHHHHHEECCCCCCHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHH
ASPASRLKAAAAKELMYNTEQGNYSNLVYLEGHSRGTMTLSNALRVLAGFNVGDTKLEVL
CCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEEE
AYNPAAEGNRLNTTYQAYTKPTHQLGELVTAGIEKLLEITKIASPASRLKAAAAKELMYN
EECCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHC
TEQGNYSNLVYLEGHSRGTMTLSNALRVLAADHVLSDTLEIRAYNPAAEGNRLAEAAALV
CCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHH
TKKPVKTWAPPKDFVANKIGGYAGNATFHDLREIFQTNYSVHSSGGTAALGSDSNHVDKE
HCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEECCCCCEEECCCCCCCCHH
KLFSYEGLDIKDMNAKRQGRTIGLLQQWQKTRRPEDPVATQLTQLQRLLWQSGQWQQQLD
HHHCCCCCCEECCCCHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHC
NTPGLLTRPTPTTPDAPSARQQQLQQLRQSLTPY
CCCCCEECCCCCCCCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA