Click here to switch to the map view.

The map label for this gene is parD [H]

Identifier: 28198860

GI number: 28198860

Start: 1164479

End: 1164718

Strand: Reverse

Name: parD [H]

Synonym: PD0961

Alternate gene names: 28198860

Gene position: 1164718-1164479 (Counterclockwise)

Preceding gene: 28198861

Following gene: 28198859

Centisome position: 46.22

GC content: 51.25

Gene sequence:

>240_bases
ATGAGTTGTCTGACCATTGACATCACGGACCAGCAGCACCAAAGCTTGAAGGCACTCGCCGCCTTACAGGGAAAGACAGT
CGAGCAGTATGCGTTGGAACGCCTATTCCCAAGCGATACTGATGCCGATCAGGCATGGCAGGATCTGAAAACCCTGGTTG
GAACGCGCATCAGTGAAGGGCTGGCGGGGAAAGTGTCCACCAAAAGCATCAATGAAATTCTCAATGAAGAACTAACCTAG

Upstream 100 bases:

>100_bases
GATGTCAATTGGTATTTTGTCATTCATTCAATTGTTGCTCCGCTATAATGGTGCAAGCACAGTTTCAGCTTGCCCACTGG
TGCGCTACGGAGGTGACCCC

Downstream 100 bases:

>100_bases
GGTCGGGCTTGACCGGCTACATTCTCACTGCTGCGGCAGAAACTGATCTGCGCAGTATCATCCGCTACACGCGCAAACAA
TGGGGCGATGCGCAGATGCG

Product: plasmid stabilization protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 79; Mature: 78

Protein sequence:

>79_residues
MSCLTIDITDQQHQSLKALAALQGKTVEQYALERLFPSDTDADQAWQDLKTLVGTRISEGLAGKVSTKSINEILNEELT

Sequences:

>Translated_79_residues
MSCLTIDITDQQHQSLKALAALQGKTVEQYALERLFPSDTDADQAWQDLKTLVGTRISEGLAGKVSTKSINEILNEELT
>Mature_78_residues
SCLTIDITDQQHQSLKALAALQGKTVEQYALERLFPSDTDADQAWQDLKTLVGTRISEGLAGKVSTKSINEILNEELT

Specific function: Involved in plasmid partition [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018985 [H]

Pfam domain/function: PF09386 ParD [H]

EC number: NA

Molecular weight: Translated: 8692; Mature: 8561

Theoretical pI: Translated: 4.33; Mature: 4.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSCLTIDITDQQHQSLKALAALQGKTVEQYALERLFPSDTDADQAWQDLKTLVGTRISEG
CCEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCC
LAGKVSTKSINEILNEELT
CCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure 
SCLTIDITDQQHQSLKALAALQGKTVEQYALERLFPSDTDADQAWQDLKTLVGTRISEG
CEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCC
LAGKVSTKSINEILNEELT
CCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2172207; 8387603; 1459960 [H]