| Definition | Xylella fastidiosa Temecula1, complete genome. |
|---|---|
| Accession | NC_004556 |
| Length | 2,519,802 |
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The map label for this gene is 28198842
Identifier: 28198842
GI number: 28198842
Start: 1140653
End: 1140937
Strand: Reverse
Name: 28198842
Synonym: PD0940
Alternate gene names: NA
Gene position: 1140937-1140653 (Counterclockwise)
Preceding gene: 28198843
Following gene: 28198841
Centisome position: 45.28
GC content: 32.98
Gene sequence:
>285_bases TTGGGTGAATTTTTGATGGTGCATTTTATTCGGAGTGTGTATTCAAAATATGCTTTGATTCGGTCTTTTTTTTATTTTCC GTTTGCTACGCTTTTTATTAATTTTCTCTTTTCGTGTTTTTTGTTGATGTTGGCGTGTGTTTGTTTGGTTTTATTAGTTC TTGTTCAGCCAACTTCTGGTTTTCAGGATTATTTTTTTGCATTCTGTGTCTCATTCTTTGTCTTCACCTGTTGCTTCATT GTGTCTTTACACTTTTGCTTTTTCTCTCTGCAATTGTGTTTTTAG
Upstream 100 bases:
>100_bases GTTGTTGTTTTCTCCCTTTAGCTGGGTATTAATTCCCATATCGTTCGCTTTTTTTTGTCTATTACGTTATTCAAAGCATT CATAATCAAATATAGTTTTC
Downstream 100 bases:
>100_bases AACCTGTCATCTTCTCTGTTGGGGATTATGGGGGCGTCGTGATTCTTTGGCCTTTAATCGTTCTTAATTTTTATGTGGAG GTGTTTAGTGTCTCGTCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 94; Mature: 93
Protein sequence:
>94_residues MGEFLMVHFIRSVYSKYALIRSFFYFPFATLFINFLFSCFLLMLACVCLVLLVLVQPTSGFQDYFFAFCVSFFVFTCCFI VSLHFCFFSLQLCF
Sequences:
>Translated_94_residues MGEFLMVHFIRSVYSKYALIRSFFYFPFATLFINFLFSCFLLMLACVCLVLLVLVQPTSGFQDYFFAFCVSFFVFTCCFI VSLHFCFFSLQLCF >Mature_93_residues GEFLMVHFIRSVYSKYALIRSFFYFPFATLFINFLFSCFLLMLACVCLVLLVLVQPTSGFQDYFFAFCVSFFVFTCCFIV SLHFCFFSLQLCF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11107; Mature: 10975
Theoretical pI: Translated: 7.66; Mature: 7.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
8.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 11.7 %Cys+Met (Translated Protein) 8.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 10.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGEFLMVHFIRSVYSKYALIRSFFYFPFATLFINFLFSCFLLMLACVCLVLLVLVQPTSG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC FQDYFFAFCVSFFVFTCCFIVSLHFCFFSLQLCF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GEFLMVHFIRSVYSKYALIRSFFYFPFATLFINFLFSCFLLMLACVCLVLLVLVQPTSG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC FQDYFFAFCVSFFVFTCCFIVSLHFCFFSLQLCF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA