| Definition | Xylella fastidiosa Temecula1, complete genome. |
|---|---|
| Accession | NC_004556 |
| Length | 2,519,802 |
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The map label for this gene is 28198840
Identifier: 28198840
GI number: 28198840
Start: 1139038
End: 1139349
Strand: Reverse
Name: 28198840
Synonym: PD0938
Alternate gene names: NA
Gene position: 1139349-1139038 (Counterclockwise)
Preceding gene: 28198841
Following gene: 28198839
Centisome position: 45.22
GC content: 41.03
Gene sequence:
>312_bases ATGTCTATTGTGAGAGTGAAAGATAATGTTCTTATTGAGCGTTCTGTAAATACTAAGACGGGGCCGCAGATTTTTCGGGA ACAGCGTGCTGCTGTGGTGATGGGGGGCGCATATGAAACTGTATTTAGCTTGAAGTTGGGTTCGGCACCTTTGTATCCCC CTGGTGAGTATTTAATCCATCCTGATTCTTATGGGATAGATGATTATGGAAACTTGGTATTAAGACGTCTTAAGTTGATT TCTTTATCTTCTGCATTAAAGGAGTTTGCTAGTAAGGAACCTCTTTCTGTTGTTTCTTCTAAGGTGTCCTGA
Upstream 100 bases:
>100_bases GATTTGCTTGCGTATTTGCGAGAGACGTTAATAGATTGTTCTGTGGGCGTGTGTGTGTAAGTCATTATGGATTTCTTTAA ATTTAATTATTAGGTGATTT
Downstream 100 bases:
>100_bases TTAGTGTCGTGTTATCGTTTTTTGTTTTAGTTATTTCTTTGTTTTTGTGTTGGTGTGTAGAGTTTTTTTTTGTTGTTTTT TGTTGATTATGTTTTTTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 103; Mature: 102
Protein sequence:
>103_residues MSIVRVKDNVLIERSVNTKTGPQIFREQRAAVVMGGAYETVFSLKLGSAPLYPPGEYLIHPDSYGIDDYGNLVLRRLKLI SLSSALKEFASKEPLSVVSSKVS
Sequences:
>Translated_103_residues MSIVRVKDNVLIERSVNTKTGPQIFREQRAAVVMGGAYETVFSLKLGSAPLYPPGEYLIHPDSYGIDDYGNLVLRRLKLI SLSSALKEFASKEPLSVVSSKVS >Mature_102_residues SIVRVKDNVLIERSVNTKTGPQIFREQRAAVVMGGAYETVFSLKLGSAPLYPPGEYLIHPDSYGIDDYGNLVLRRLKLIS LSSALKEFASKEPLSVVSSKVS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11314; Mature: 11183
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIVRVKDNVLIERSVNTKTGPQIFREQRAAVVMGGAYETVFSLKLGSAPLYPPGEYLIH CCEEEECCCEEEEECCCCCCCHHHHHHCCCEEEECCCHHHHEEEECCCCCCCCCCCEEEC PDSYGIDDYGNLVLRRLKLISLSSALKEFASKEPLSVVSSKVS CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCC >Mature Secondary Structure SIVRVKDNVLIERSVNTKTGPQIFREQRAAVVMGGAYETVFSLKLGSAPLYPPGEYLIH CEEEECCCEEEEECCCCCCCHHHHHHCCCEEEECCCHHHHEEEECCCCCCCCCCCEEEC PDSYGIDDYGNLVLRRLKLISLSSALKEFASKEPLSVVSSKVS CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA