| Definition | Xylella fastidiosa Temecula1, complete genome. |
|---|---|
| Accession | NC_004556 |
| Length | 2,519,802 |
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The map label for this gene is 28198832
Identifier: 28198832
GI number: 28198832
Start: 1134141
End: 1134488
Strand: Reverse
Name: 28198832
Synonym: PD0930
Alternate gene names: NA
Gene position: 1134488-1134141 (Counterclockwise)
Preceding gene: 28198833
Following gene: 28198831
Centisome position: 45.02
GC content: 48.28
Gene sequence:
>348_bases ATGACTAGCAATGAGATTCCAAATCAAAAACTAACAGGAAACTGGACAGGATTCGCATTCATCAACGGAAAGCTAGTCAC ACCAGAAAGAAAAGCCATTGAAGAATGGCAACTGAGATGGTTATCGCTGACCTGCTCACTAGCGCAAGAATGGCAAAAAA TGATGGAAGAAGCGCGAGCGGCAGCGCCACAAGGCGGCTGTGCCGCATCCGATCCGCAGCGCATCACTAACGCATCTCAA AAAACGGTTTTGCGTAAAAGAAGGCACACAGCCAATGGAACCGCGTCGATCATCGTATTAAGGCAAGTGCTGATACAACG CCAACAAAAGCGTAAAGCGTCTCCGTAG
Upstream 100 bases:
>100_bases CTTCGCATAATGCATATTATGTCCGCTGGAGAAGATGGGTACGAGAACTAGCAATTAGTCTCAAAAAGAGACATACAGGG ACACCACTAGCGCACGCACA
Downstream 100 bases:
>100_bases GGGGCTAGCCCCCTACACCCCTCAGTGATCTACACTATGTAAAGAAAACACTAGGAAAAATGACAATGACCCAAAAAGAA CACAACGCAGAGATCATAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 115; Mature: 114
Protein sequence:
>115_residues MTSNEIPNQKLTGNWTGFAFINGKLVTPERKAIEEWQLRWLSLTCSLAQEWQKMMEEARAAAPQGGCAASDPQRITNASQ KTVLRKRRHTANGTASIIVLRQVLIQRQQKRKASP
Sequences:
>Translated_115_residues MTSNEIPNQKLTGNWTGFAFINGKLVTPERKAIEEWQLRWLSLTCSLAQEWQKMMEEARAAAPQGGCAASDPQRITNASQ KTVLRKRRHTANGTASIIVLRQVLIQRQQKRKASP >Mature_114_residues TSNEIPNQKLTGNWTGFAFINGKLVTPERKAIEEWQLRWLSLTCSLAQEWQKMMEEARAAAPQGGCAASDPQRITNASQK TVLRKRRHTANGTASIIVLRQVLIQRQQKRKASP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12973; Mature: 12842
Theoretical pI: Translated: 11.37; Mature: 11.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSNEIPNQKLTGNWTGFAFINGKLVTPERKAIEEWQLRWLSLTCSLAQEWQKMMEEARA CCCCCCCCCCCCCCCCEEEEECCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAPQGGCAASDPQRITNASQKTVLRKRRHTANGTASIIVLRQVLIQRQQKRKASP CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TSNEIPNQKLTGNWTGFAFINGKLVTPERKAIEEWQLRWLSLTCSLAQEWQKMMEEARA CCCCCCCCCCCCCCCEEEEECCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAPQGGCAASDPQRITNASQKTVLRKRRHTANGTASIIVLRQVLIQRQQKRKASP CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA