| Definition | Xylella fastidiosa Temecula1, complete genome. |
|---|---|
| Accession | NC_004556 |
| Length | 2,519,802 |
Click here to switch to the map view.
The map label for this gene is 28198777
Identifier: 28198777
GI number: 28198777
Start: 1084841
End: 1085227
Strand: Reverse
Name: 28198777
Synonym: PD0873
Alternate gene names: NA
Gene position: 1085227-1084841 (Counterclockwise)
Preceding gene: 28198778
Following gene: 28198776
Centisome position: 43.07
GC content: 36.95
Gene sequence:
>387_bases ATGGAACAAATATACCATTATACCCGTCATAATTCAGTGAACCAAGCGGCTGCAGCCTATAGTACTGCTCCAGAAAATCG CAGGTTGTTACGTTTCGTCTATAAACATGCATTAGAGGAGTTAGGGCATGAGCAAATGATAGTTCATGACCTGAAAAGCA TAAATTTGTATAATGAAGGATTTGAGAATCATCGTCCTTTACCTGCAACTCAAGCTCTGATTTCATATTTATATAAAGTT GCGCTCGATAAAGGGGCGGTGGCTAGGCTTGGATATAGTTATTGGGCTGAAAATTGTTACGGTCATATTGATCCGTTACT TAGAAAATTTTCTAATGACCTCAACCTAACTGAAAATAATATGAGTTTTTTAGTTGCACATTCATAA
Upstream 100 bases:
>100_bases TTGAGAATTCAGTTTCTCGTGAGTGGCAACATATTAAGAATGGCACTTTCTGGAAAAAATAATTTCTGAACCTGTTGATC CAAGACTCTACCAATTGATG
Downstream 100 bases:
>100_bases ATTGATTCTAAACACTCTGATGAAGTTAATGAAGCTATTTCATTTAGTGAACTTACAAAAGACGAGGAAGAGGAAATTAT CAACACTGCTGTGACTACGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 128; Mature: 128
Protein sequence:
>128_residues MEQIYHYTRHNSVNQAAAAYSTAPENRRLLRFVYKHALEELGHEQMIVHDLKSINLYNEGFENHRPLPATQALISYLYKV ALDKGAVARLGYSYWAENCYGHIDPLLRKFSNDLNLTENNMSFLVAHS
Sequences:
>Translated_128_residues MEQIYHYTRHNSVNQAAAAYSTAPENRRLLRFVYKHALEELGHEQMIVHDLKSINLYNEGFENHRPLPATQALISYLYKV ALDKGAVARLGYSYWAENCYGHIDPLLRKFSNDLNLTENNMSFLVAHS >Mature_128_residues MEQIYHYTRHNSVNQAAAAYSTAPENRRLLRFVYKHALEELGHEQMIVHDLKSINLYNEGFENHRPLPATQALISYLYKV ALDKGAVARLGYSYWAENCYGHIDPLLRKFSNDLNLTENNMSFLVAHS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14813; Mature: 14813
Theoretical pI: Translated: 7.29; Mature: 7.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQIYHYTRHNSVNQAAAAYSTAPENRRLLRFVYKHALEELGHEQMIVHDLKSINLYNEG CCCHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC FENHRPLPATQALISYLYKVALDKGAVARLGYSYWAENCYGHIDPLLRKFSNDLNLTENN CCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCC MSFLVAHS CEEEEECC >Mature Secondary Structure MEQIYHYTRHNSVNQAAAAYSTAPENRRLLRFVYKHALEELGHEQMIVHDLKSINLYNEG CCCHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC FENHRPLPATQALISYLYKVALDKGAVARLGYSYWAENCYGHIDPLLRKFSNDLNLTENN CCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCC MSFLVAHS CEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA