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The map label for this gene is ygfA [C]

Identifier: 28198704

GI number: 28198704

Start: 988291

End: 988902

Strand: Reverse

Name: ygfA [C]

Synonym: PD0799

Alternate gene names: 28198704

Gene position: 988902-988291 (Counterclockwise)

Preceding gene: 28198705

Following gene: 28198703

Centisome position: 39.25

GC content: 55.56

Gene sequence:

>612_bases
TTGCTCCAAACATCCAAACCGATGACTGACAACCGCTCCATCCTCCGTCAACACATGCGCGCACGCCGACATGCAATCCA
TGAACACGCACGTCTGGCCGCTGGTGTAACACTGGCAGAACACCTACTAACACTCCCATTCGCACCCCAATCCGGCGCAG
TAGCCGGTTACTGGGCGATGAATGGAGAGATCCCCTTGCATCACTGGCAAACCAGACTCCCTACACAAGTACGCTATTGC
TTACCAATACTGGCAGGTAAAACATTGCGCTTTGCACCGTGGCACCCCGGACAACCCCTGAAACAAAACAGCTACGGCAT
CCCCGAACCAGACGTGACACTGGATGAAACCCTAACTCCAGAAACGATGACACTGGTAGTCACACCGCTGGTCGGCTTCG
ATACTCAAGGACATCGCCTCGGAATGGGCGGTGGCTGGTATGACCGCAGCTTCGCATTCCGCAATCGCCAGTCGCCCCCT
CCCTGGCTTGTTGGTGTTGGCTTCACAGTACAGCAAGTCAGCGCACTGCCAACTGAAGCCTGGGACATCCCCGTCGATGC
GATCTGCACTGAACTGACCACACTCCTATTCACCACTACTGTGTCCACATGA

Upstream 100 bases:

>100_bases
CTCAACACTATTGGAACACTCATCCCTATCGTATCGCCCCCCAAAGCCTCCAAAGTCAGTCAAGCCATCTGAGATTTAAA
CCCAATCAGACAGTTGTTGT

Downstream 100 bases:

>100_bases
GCACACGTCACTACTGGTTAATGAAATCCGAACCAGATGCTTTCTCAATTGATGATCTACAGCAGGTTGGTACCGAGCCA
TGGAACGGCGTACGCAATTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MLQTSKPMTDNRSILRQHMRARRHAIHEHARLAAGVTLAEHLLTLPFAPQSGAVAGYWAMNGEIPLHHWQTRLPTQVRYC
LPILAGKTLRFAPWHPGQPLKQNSYGIPEPDVTLDETLTPETMTLVVTPLVGFDTQGHRLGMGGGWYDRSFAFRNRQSPP
PWLVGVGFTVQQVSALPTEAWDIPVDAICTELTTLLFTTTVST

Sequences:

>Translated_203_residues
MLQTSKPMTDNRSILRQHMRARRHAIHEHARLAAGVTLAEHLLTLPFAPQSGAVAGYWAMNGEIPLHHWQTRLPTQVRYC
LPILAGKTLRFAPWHPGQPLKQNSYGIPEPDVTLDETLTPETMTLVVTPLVGFDTQGHRLGMGGGWYDRSFAFRNRQSPP
PWLVGVGFTVQQVSALPTEAWDIPVDAICTELTTLLFTTTVST
>Mature_203_residues
MLQTSKPMTDNRSILRQHMRARRHAIHEHARLAAGVTLAEHLLTLPFAPQSGAVAGYWAMNGEIPLHHWQTRLPTQVRYC
LPILAGKTLRFAPWHPGQPLKQNSYGIPEPDVTLDETLTPETMTLVVTPLVGFDTQGHRLGMGGGWYDRSFAFRNRQSPP
PWLVGVGFTVQQVSALPTEAWDIPVDAICTELTTLLFTTTVST

Specific function: Unknown

COG id: COG0212

COG function: function code H; 5-formyltetrahydrofolate cyclo-ligase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 5-formyltetrahydrofolate cyclo-ligase family [H]

Homologues:

Organism=Escherichia coli, GI1789278, Length=176, Percent_Identity=33.5227272727273, Blast_Score=89, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002698 [H]

Pfam domain/function: PF01812 5-FTHF_cyc-lig [H]

EC number: NA

Molecular weight: Translated: 22612; Mature: 22612

Theoretical pI: Translated: 8.28; Mature: 8.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQTSKPMTDNRSILRQHMRARRHAIHEHARLAAGVTLAEHLLTLPFAPQSGAVAGYWAM
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEE
NGEIPLHHWQTRLPTQVRYCLPILAGKTLRFAPWHPGQPLKQNSYGIPEPDVTLDETLTP
CCCCCHHHHHHCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ETMTLVVTPLVGFDTQGHRLGMGGGWYDRSFAFRNRQSPPPWLVGVGFTVQQVSALPTEA
CEEEEEEECCCCCCCCCCEECCCCCCCCCCHHHCCCCCCCCEEEECCCHHHHHHHCCCCC
WDIPVDAICTELTTLLFTTTVST
CCCCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLQTSKPMTDNRSILRQHMRARRHAIHEHARLAAGVTLAEHLLTLPFAPQSGAVAGYWAM
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEE
NGEIPLHHWQTRLPTQVRYCLPILAGKTLRFAPWHPGQPLKQNSYGIPEPDVTLDETLTP
CCCCCHHHHHHCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ETMTLVVTPLVGFDTQGHRLGMGGGWYDRSFAFRNRQSPPPWLVGVGFTVQQVSALPTEA
CEEEEEEECCCCCCCCCCEECCCCCCCCCCHHHCCCCCCCCEEEECCCHHHHHHHCCCCC
WDIPVDAICTELTTLLFTTTVST
CCCCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]