Click here to switch to the map view.

The map label for this gene is 28198685

Identifier: 28198685

GI number: 28198685

Start: 961228

End: 961485

Strand: Reverse

Name: 28198685

Synonym: PD0780

Alternate gene names: NA

Gene position: 961485-961228 (Counterclockwise)

Preceding gene: 28198688

Following gene: 28198683

Centisome position: 38.16

GC content: 46.51

Gene sequence:

>258_bases
GTGATGAATCCATTAATTCCCAATACCTACGAAGCTTGGCGTCACTGCATAGAACACCGCTGCAACATCCCTCTGACTCA
GACTTATATTGAGGAACGCTTGGCTGCATTAAGTGATCCGAACAATTTCCACACTCAGCAATTCATACGATGTTGGGGGG
AAACACATTTACGACAAATCACGCATTGGTTCACGTTAGCGATTGAGTCTGAACGGCACACCTCTCGCCATCTCCCGGGC
CCAATATCGGAAAAATAA

Upstream 100 bases:

>100_bases
GGCACAGAGTTAAGTTAACGCCGCTGGAAATATGTTATAAAATAACACAATAAATCCGAGTAAATACTGTCAAACACCAC
ATTTTCACGGCTGATCATCT

Downstream 100 bases:

>100_bases
TTACTTGCACCACAAAATCATGATTTCCTCAAAAATGATACTGGCTGCTTACACCAGATATCTCGCATCTTCTAATACTG
TATTTATGTTTTCGCCCGTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 85; Mature: 85

Protein sequence:

>85_residues
MMNPLIPNTYEAWRHCIEHRCNIPLTQTYIEERLAALSDPNNFHTQQFIRCWGETHLRQITHWFTLAIESERHTSRHLPG
PISEK

Sequences:

>Translated_85_residues
MMNPLIPNTYEAWRHCIEHRCNIPLTQTYIEERLAALSDPNNFHTQQFIRCWGETHLRQITHWFTLAIESERHTSRHLPG
PISEK
>Mature_85_residues
MMNPLIPNTYEAWRHCIEHRCNIPLTQTYIEERLAALSDPNNFHTQQFIRCWGETHLRQITHWFTLAIESERHTSRHLPG
PISEK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10165; Mature: 10165

Theoretical pI: Translated: 7.20; Mature: 7.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNPLIPNTYEAWRHCIEHRCNIPLTQTYIEERLAALSDPNNFHTQQFIRCWGETHLRQI
CCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
THWFTLAIESERHTSRHLPGPISEK
HHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MMNPLIPNTYEAWRHCIEHRCNIPLTQTYIEERLAALSDPNNFHTQQFIRCWGETHLRQI
CCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
THWFTLAIESERHTSRHLPGPISEK
HHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA