Click here to switch to the map view.

The map label for this gene is ynhE [C]

Identifier: 28198601

GI number: 28198601

Start: 848957

End: 850414

Strand: Reverse

Name: ynhE [C]

Synonym: PD0693

Alternate gene names: 28198601

Gene position: 850414-848957 (Counterclockwise)

Preceding gene: 28198602

Following gene: 28198600

Centisome position: 33.75

GC content: 54.73

Gene sequence:

>1458_bases
ATGGCTACTGACATCGCCACCCCACAGAACGCCGAGATTCTCGAACGCCTGGACAGGCGCTACGAAGCCGGCTTCGTGAC
CCAAATTGAATCCGACTCGCTACCGCCTGGTCTCAACGAAACAATCATCCGCGCCCTATCGGCCAAGAAACACGAGCCAG
AATGGATGACCGAATGGCGTCTGGCAGCCTACCGTCACTGGCTAAACATGCCGATGCCAGAATGGGCAAAACTCCACATC
GCGCCGATCGACTTCCAAGCACTTAGCTACTACTCCGCCCCCAAAGGTCCGAAGTACGCCTCCCTTGACGAAGTCCCCAA
AGAACTATTGGATACCTACGACAAACTCGGCGTACCACTGCACGAACGTGCCAGATTGGCCGGCGTCGCAGTGGATGCGG
TATTTGACTCCGTATCACTCGGTACCACCTTCCGCAAAGAATTAGCCGAAAAAGGCATCATTTTCTGCTCGATCTCCGAA
GCCATCCAAGAACACCCAGATCTGATACGCCAGTATCTGGGCAGCGTCGTACCCGTTCGAGACAACTACTTCGCTGCACT
AAACTCGGCAGTCTTCTCTGACGGCAGCTTCGTCTTTATCCCAAAGGGCGTCCGCTGCCCAATGGAATTAAGCACCTACT
TCCGCATCAATGCCGGCCACACCGGACAATTTGAACGCACCTTGATCGTGTGCGAAGAACAAGCCTACGTCTCCTATCTA
GAGGGCTGCACAGCCCCAATACGCGACGAAAACCAACTTCATGCAGCGGTCGTCGAACTGGTCGCCCAAGAAGATGCAGA
GATTAAATACTCCACCGTACAAAACTGGTACCCAGGCGACGAAGCAGGCCGTGGCGGCATTTATAACTTCGTCACCAAAC
GCGCCGAATGCCGCGGCGCGCGCAGCAAAGTAATCTGGACCCAAGTTGAAACCGGCTCAGCGATCACTTGGAAATACCCA
TCCTGCGTCTTGCTAGGCGACGACTCAACCGGTGAATTCCACTCCGTCGCACTGACCCGCCACCATCAACAAGCCGACAC
CGGCACCAAGATGATCCACATTGGCAAACGCACCAAAAGCAAAATTGTCAGCAAAGGGATCAGCGCTGGACATGGACAAA
ACACCTACCGTGGTCTCGTCAAAATCGACCGCAACGCAGAGGGCGCACGCAACCACACCCAATGCGACTCACTGCTCATC
GGCAAACAATGCGGCGCCCACACCTTCCCCTACATCGAAGTGAAACACCCAAACGCCACCGTCGAACACGAAGCCACCAC
ATCCAAAATCAGCGACGACCAACTCTTCTACTGCCGCGCACGCGGTATTGCCGAAGAAGATGCTGTCTCGATCATCGTCG
ACGGCTTCTGCAAACAAGTGTTCCGCGAACTACCAATGGAGTTCGCCGTCGAAGCGAAAAAACTACTCGACATCTCATTG
GAAGGATCTGTCGGCTAA

Upstream 100 bases:

>100_bases
CACAAATGCTGGCTCCCCTCCCCGCTTTTTCTACTCACAGCCAGCCGCGCACCATCGCCGCCAGCATCACAACCACCTGA
CACAAGCAAACGACAGAACC

Downstream 100 bases:

>100_bases
ATCAACACCAGTGGATGGGGTATCCCTGAGTCCCGGACGCGCTCTAAAACCCAAACACTCCATCCACTCCAACAACGCAT
CCAAACCGCCTCAGTCCCAT

Product: cysteine desulfurase activator complex subunit SufB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 485; Mature: 484

Protein sequence:

>485_residues
MATDIATPQNAEILERLDRRYEAGFVTQIESDSLPPGLNETIIRALSAKKHEPEWMTEWRLAAYRHWLNMPMPEWAKLHI
APIDFQALSYYSAPKGPKYASLDEVPKELLDTYDKLGVPLHERARLAGVAVDAVFDSVSLGTTFRKELAEKGIIFCSISE
AIQEHPDLIRQYLGSVVPVRDNYFAALNSAVFSDGSFVFIPKGVRCPMELSTYFRINAGHTGQFERTLIVCEEQAYVSYL
EGCTAPIRDENQLHAAVVELVAQEDAEIKYSTVQNWYPGDEAGRGGIYNFVTKRAECRGARSKVIWTQVETGSAITWKYP
SCVLLGDDSTGEFHSVALTRHHQQADTGTKMIHIGKRTKSKIVSKGISAGHGQNTYRGLVKIDRNAEGARNHTQCDSLLI
GKQCGAHTFPYIEVKHPNATVEHEATTSKISDDQLFYCRARGIAEEDAVSIIVDGFCKQVFRELPMEFAVEAKKLLDISL
EGSVG

Sequences:

>Translated_485_residues
MATDIATPQNAEILERLDRRYEAGFVTQIESDSLPPGLNETIIRALSAKKHEPEWMTEWRLAAYRHWLNMPMPEWAKLHI
APIDFQALSYYSAPKGPKYASLDEVPKELLDTYDKLGVPLHERARLAGVAVDAVFDSVSLGTTFRKELAEKGIIFCSISE
AIQEHPDLIRQYLGSVVPVRDNYFAALNSAVFSDGSFVFIPKGVRCPMELSTYFRINAGHTGQFERTLIVCEEQAYVSYL
EGCTAPIRDENQLHAAVVELVAQEDAEIKYSTVQNWYPGDEAGRGGIYNFVTKRAECRGARSKVIWTQVETGSAITWKYP
SCVLLGDDSTGEFHSVALTRHHQQADTGTKMIHIGKRTKSKIVSKGISAGHGQNTYRGLVKIDRNAEGARNHTQCDSLLI
GKQCGAHTFPYIEVKHPNATVEHEATTSKISDDQLFYCRARGIAEEDAVSIIVDGFCKQVFRELPMEFAVEAKKLLDISL
EGSVG
>Mature_484_residues
ATDIATPQNAEILERLDRRYEAGFVTQIESDSLPPGLNETIIRALSAKKHEPEWMTEWRLAAYRHWLNMPMPEWAKLHIA
PIDFQALSYYSAPKGPKYASLDEVPKELLDTYDKLGVPLHERARLAGVAVDAVFDSVSLGTTFRKELAEKGIIFCSISEA
IQEHPDLIRQYLGSVVPVRDNYFAALNSAVFSDGSFVFIPKGVRCPMELSTYFRINAGHTGQFERTLIVCEEQAYVSYLE
GCTAPIRDENQLHAAVVELVAQEDAEIKYSTVQNWYPGDEAGRGGIYNFVTKRAECRGARSKVIWTQVETGSAITWKYPS
CVLLGDDSTGEFHSVALTRHHQQADTGTKMIHIGKRTKSKIVSKGISAGHGQNTYRGLVKIDRNAEGARNHTQCDSLLIG
KQCGAHTFPYIEVKHPNATVEHEATTSKISDDQLFYCRARGIAEEDAVSIIVDGFCKQVFRELPMEFAVEAKKLLDISLE
GSVG

Specific function: Unknown

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI87081955, Length=480, Percent_Identity=63.125, Blast_Score=639, Evalue=0.0,
Organism=Escherichia coli, GI1787971, Length=153, Percent_Identity=28.7581699346405, Blast_Score=74, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010231
- InterPro:   IPR000825 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 54050; Mature: 53919

Theoretical pI: Translated: 6.20; Mature: 6.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATDIATPQNAEILERLDRRYEAGFVTQIESDSLPPGLNETIIRALSAKKHEPEWMTEWR
CCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCHHHHHHH
LAAYRHWLNMPMPEWAKLHIAPIDFQALSYYSAPKGPKYASLDEVPKELLDTYDKLGVPL
HHHHHHHHCCCCCCHHEEEEEECCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCH
HERARLAGVAVDAVFDSVSLGTTFRKELAEKGIIFCSISEAIQEHPDLIRQYLGSVVPVR
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCEEEEEHHHHHHHCHHHHHHHHCCEECCC
DNYFAALNSAVFSDGSFVFIPKGVRCPMELSTYFRINAGHTGQFERTLIVCEEQAYVSYL
CCHHHHHHHHHCCCCCEEEECCCCCCCCEEEEEEEEECCCCCCCCEEEEEECHHHHHHHH
EGCTAPIRDENQLHAAVVELVAQEDAEIKYSTVQNWYPGDEAGRGGIYNFVTKRAECRGA
HCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEHHCCCCCCCCCCCCCHHHHHHHHHHHCCC
RSKVIWTQVETGSAITWKYPSCVLLGDDSTGEFHSVALTRHHQQADTGTKMIHIGKRTKS
CCCEEEEEECCCCEEEEECCEEEEECCCCCCCEEEEHHHHHHHHCCCCCEEEEECCHHHH
KIVSKGISAGHGQNTYRGLVKIDRNAEGARNHTQCDSLLIGKQCGAHTFPYIEVKHPNAT
HHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCEEEEECCCCC
VEHEATTSKISDDQLFYCRARGIAEEDAVSIIVDGFCKQVFRELPMEFAVEAKKLLDISL
EECCCHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHEEEEE
EGSVG
CCCCC
>Mature Secondary Structure 
ATDIATPQNAEILERLDRRYEAGFVTQIESDSLPPGLNETIIRALSAKKHEPEWMTEWR
CCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCHHHHHHH
LAAYRHWLNMPMPEWAKLHIAPIDFQALSYYSAPKGPKYASLDEVPKELLDTYDKLGVPL
HHHHHHHHCCCCCCHHEEEEEECCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCH
HERARLAGVAVDAVFDSVSLGTTFRKELAEKGIIFCSISEAIQEHPDLIRQYLGSVVPVR
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCEEEEEHHHHHHHCHHHHHHHHCCEECCC
DNYFAALNSAVFSDGSFVFIPKGVRCPMELSTYFRINAGHTGQFERTLIVCEEQAYVSYL
CCHHHHHHHHHCCCCCEEEECCCCCCCCEEEEEEEEECCCCCCCCEEEEEECHHHHHHHH
EGCTAPIRDENQLHAAVVELVAQEDAEIKYSTVQNWYPGDEAGRGGIYNFVTKRAECRGA
HCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEHHCCCCCCCCCCCCCHHHHHHHHHHHCCC
RSKVIWTQVETGSAITWKYPSCVLLGDDSTGEFHSVALTRHHQQADTGTKMIHIGKRTKS
CCCEEEEEECCCCEEEEECCEEEEECCCCCCCEEEEHHHHHHHHCCCCCEEEEECCHHHH
KIVSKGISAGHGQNTYRGLVKIDRNAEGARNHTQCDSLLIGKQCGAHTFPYIEVKHPNAT
HHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCEEEEECCCCC
VEHEATTSKISDDQLFYCRARGIAEEDAVSIIVDGFCKQVFRELPMEFAVEAKKLLDISL
EECCCHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHEEEEE
EGSVG
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]